Genome sequence of the Wenxinia marina type strain (DSM 24838T), a representative of the Roseobacter group isolated from oilfield sediments

Riedel, Thomas; Fiebig, Anne; Han, James; Huntemann, Marcel; Spring, Stefan; Petersen, Jörn; Ivanova, Natalia N.; Markowitz, Victor; Woyke, Tanja; Göker, Markus; Kyrpides, Nikos C.; Klenk, Hans-Peter

doi:10.4056/sigs.5601028

Title: Genome sequence of the Wenxinia marina type strain (DSM 24838^T), a representative of the Roseobacter group isolated from oilfield sediments

Journal Article · Sun Jun 15 00:00:00 EDT 2014 · Standards in Genomic Sciences

DOI:https://doi.org/10.4056/sigs.5601028· OSTI ID:1629551

Riedel, Thomas ^[1]; Fiebig, Anne ^[2]; Han, James ^[3]; Huntemann, Marcel ^[3]; Spring, Stefan ^[4]; Petersen, Jörn ^[4]; Ivanova, Natalia N. ^[3]; Markowitz, Victor ^[5]; Woyke, Tanja ^[3]; Göker, Markus ^[4]; Kyrpides, Nikos C. ^[3]; Klenk, Hans-Peter ^[4]

Sorbonne Univ., Paris (France). Observatoire Océanologique; Centre National de la Recherche Scientifique (CNRS), Banyuls-sur-Mer (France). Observatoire Océanologique
Leibniz Inst. DSMZ – German Collection of Microorganisms and Cell Cultures, Braunschweig (Germany)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
Leibniz Inst. DSMZ – German Collection of Microorganisms and Cell Cultures, Braunschweig (Germany)
Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Biological Data Management and Technology Center

Wenxinia marina Ying et al. 2007 is the type species of the genus Wenxinia, a representative of the Roseobacter group within the alphaproteobacterial family Rhodobacteraceae, isolated from oilfield sediments of the South China Sea. This family was shown to harbor the most abundant bacteria especially from coastal and polar waters, but was also found in microbial mats, sediments and attached to different kind of surfaces. Here we describe the features of W. marina strain HY34^T together with the genome sequence and annotation of strain DSM 24838^T and novel aspects of its phenotype. The 4,181,754 bp containing genome sequence encodes 4,047 protein-coding genes and 59 RNA genes. The genome of W. marina DSM 24838^T was sequenced as part of the activities of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project funded by the DoE and the Transregional Collaborative Research Centre 51 (TRR51) funded by the German Research Foundation (DFG).

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Research Organization:: Lawrence Livermore National Laboratory (LLNL), Livermore, CA (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division; German Research Foundation (DFG)

Grant/Contract Number:: AC52-07NA27344; AC02-05CH11231

OSTI ID:: 1629551

Journal Information:: Standards in Genomic Sciences, Vol. 9, Issue 3; ISSN 1944-3277

Publisher:: BioMed CentralCopyright Statement

Country of Publication:: United States

Language:: English

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Exemplar Abstract for Wenxinia marina Ying et al. 2007 emend. Hördt et al. 2020. Parker, Charles Thomas; Taylor, Dorothea; Garrity, George M. NamesforLife https://doi.org/10.1601/ex.11278	dataset	January 2013

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59 BASIC BIOLOGICAL SCIENCES
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Rhodobacteraceae
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Title: Genome sequence of the Wenxinia marina type strain (DSM 24838T), a representative of the Roseobacter group isolated from oilfield sediments

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Title: Genome sequence of the Wenxinia marina type strain (DSM 24838^T), a representative of the Roseobacter group isolated from oilfield sediments