Molecular Studies of the Protein Complexes Involving Cis-Prenyltransferase in Guayule (Parthenium argentatum), an Alternative Rubber-Producing Plant
Abstract
Guayule (Parthenium argentatum) is a perennial shrub in the Asteraceae family and synthesizes a high quality, hypoallergenic cis-1,4-polyisoprene (or natural rubber; NR). Despite its potential to be an alternative NR supplier, the enzymes for cis-polyisoprene biosynthesis have not been comprehensively studied in guayule. Recently, implications of the protein complex involving cis-prenyltransferases (CPTs) and CPT-Binding Proteins (CBPs) in NR biosynthesis were shown in lettuce and dandelion, but such protein complexes have yet to be examined in guayule. In this work, we identified four guayule genes - three PaCPTs (PaCPT1-3) and one PaCBP, whose protein products organize PaCPT/PaCBP complexes. Co-expression of both PaCBP and each of the PaCPTs could complemented the dolichol (a short cis-polyisoprene)-deficient yeast, whereas the individual expressions could not. Microsomes from the PaCPT/PaCBP-expressing yeast efficiently incorporated 14C-isopentenyl diphosphate into dehydrodolichyl diphosphates; however, NR with high molecular weight could not be synthesized in in vitro assays. Furthermore, co-immunoprecipitation and split-ubiquitin yeast 2-hybrid assays using PaCPTs and PaCBP confirmed the formation of protein complexes. Of the three PaCPTs, guayule transcriptomics analysis indicated that the PaCPT3 is predominantly expressed in stem and induced by cold-stress, suggesting its involvement in NR biosynthesis. The comprehensive analyses of these PaCPTs and PaCBP here provide themore »
- Authors:
-
- Univ. of Calgary, AB (Canada)
- Univ. of Calgary, AB (Canada); Gyeongsang National Univ., Jinju (South Korea)
- Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
- Publication Date:
- Research Org.:
- Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Biological and Environmental Research (BER); National Science and Engineering Research Council of Canada (NSERC); Canada Research Chair (CRC); National Research Foundation of Korea (NRF); e Next-Generation BioGreen 21 Program
- OSTI Identifier:
- 1542354
- Grant/Contract Number:
- AC02-05CH11231
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Frontiers in Plant Science
- Additional Journal Information:
- Journal Volume: 10; Journal ID: ISSN 1664-462X
- Publisher:
- Frontiers Research Foundation
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES; terpenoid; cis-prenyltransferase; guayule (Parthenium argentatum); polyisoprene; protein complex
Citation Formats
Lakusta, Adam M., Kwon, Moonhyuk, Kwon, Eun-Joo G., Stonebloom, Solomon, Scheller, Henrik V., and Ro, Dae-Kyun. Molecular Studies of the Protein Complexes Involving Cis-Prenyltransferase in Guayule (Parthenium argentatum), an Alternative Rubber-Producing Plant. United States: N. p., 2019.
Web. doi:10.3389/fpls.2019.00165.
Lakusta, Adam M., Kwon, Moonhyuk, Kwon, Eun-Joo G., Stonebloom, Solomon, Scheller, Henrik V., & Ro, Dae-Kyun. Molecular Studies of the Protein Complexes Involving Cis-Prenyltransferase in Guayule (Parthenium argentatum), an Alternative Rubber-Producing Plant. United States. https://doi.org/10.3389/fpls.2019.00165
Lakusta, Adam M., Kwon, Moonhyuk, Kwon, Eun-Joo G., Stonebloom, Solomon, Scheller, Henrik V., and Ro, Dae-Kyun. Mon .
"Molecular Studies of the Protein Complexes Involving Cis-Prenyltransferase in Guayule (Parthenium argentatum), an Alternative Rubber-Producing Plant". United States. https://doi.org/10.3389/fpls.2019.00165. https://www.osti.gov/servlets/purl/1542354.
@article{osti_1542354,
title = {Molecular Studies of the Protein Complexes Involving Cis-Prenyltransferase in Guayule (Parthenium argentatum), an Alternative Rubber-Producing Plant},
author = {Lakusta, Adam M. and Kwon, Moonhyuk and Kwon, Eun-Joo G. and Stonebloom, Solomon and Scheller, Henrik V. and Ro, Dae-Kyun},
abstractNote = {Guayule (Parthenium argentatum) is a perennial shrub in the Asteraceae family and synthesizes a high quality, hypoallergenic cis-1,4-polyisoprene (or natural rubber; NR). Despite its potential to be an alternative NR supplier, the enzymes for cis-polyisoprene biosynthesis have not been comprehensively studied in guayule. Recently, implications of the protein complex involving cis-prenyltransferases (CPTs) and CPT-Binding Proteins (CBPs) in NR biosynthesis were shown in lettuce and dandelion, but such protein complexes have yet to be examined in guayule. In this work, we identified four guayule genes - three PaCPTs (PaCPT1-3) and one PaCBP, whose protein products organize PaCPT/PaCBP complexes. Co-expression of both PaCBP and each of the PaCPTs could complemented the dolichol (a short cis-polyisoprene)-deficient yeast, whereas the individual expressions could not. Microsomes from the PaCPT/PaCBP-expressing yeast efficiently incorporated 14C-isopentenyl diphosphate into dehydrodolichyl diphosphates; however, NR with high molecular weight could not be synthesized in in vitro assays. Furthermore, co-immunoprecipitation and split-ubiquitin yeast 2-hybrid assays using PaCPTs and PaCBP confirmed the formation of protein complexes. Of the three PaCPTs, guayule transcriptomics analysis indicated that the PaCPT3 is predominantly expressed in stem and induced by cold-stress, suggesting its involvement in NR biosynthesis. The comprehensive analyses of these PaCPTs and PaCBP here provide the foundational knowledge to generate a high NR-yielding guayule.},
doi = {10.3389/fpls.2019.00165},
journal = {Frontiers in Plant Science},
number = ,
volume = 10,
place = {United States},
year = {Mon Feb 25 00:00:00 EST 2019},
month = {Mon Feb 25 00:00:00 EST 2019}
}
Web of Science
Works referenced in this record:
Effect of Different Allylic Diphosphates on the Initiation of New Rubber Molecules and on Cis-1,4-polyisoprene Biosynthesis in Guayule (Parthenium argentatum Gray)
journal, January 1995
- Cornish, Katrina; Siler, Deborah J.
- Journal of Plant Physiology, Vol. 147, Issue 3-4
A Lettuce ( Lactuca sativa ) Homolog of Human Nogo-B Receptor Interacts with cis -Prenyltransferase and Is Necessary for Natural Rubber Biosynthesis
journal, December 2014
- Qu, Yang; Chakrabarty, Romit; Tran, Hue T.
- Journal of Biological Chemistry, Vol. 290, Issue 4
Crystal structure of cis-prenyl chain elongating enzyme, undecaprenyl diphosphate synthase
journal, April 2001
- Fujihashi, M.; Zhang, Y. -W.; Higuchi, Y.
- Proceedings of the National Academy of Sciences, Vol. 98, Issue 8
Isolation, Characterization, and Functional Analysis of a Novel cDNA Clone Encoding a Small Rubber Particle Protein from Hevea brasiliensis
journal, June 1999
- Oh, Soo Kyung; Kang, Hunseung; Shin, Dong Ho
- Journal of Biological Chemistry, Vol. 274, Issue 24
Structures, mechanisms and inhibitors of undecaprenyl diphosphate synthase: A cis-prenyltransferase for bacterial peptidoglycan biosynthesis
journal, August 2012
- Teng, Kuo-Hsun; Liang, Po-Huang
- Bioorganic Chemistry, Vol. 43
Genomics of Compositae crops: reference transcriptome assemblies and evidence of hybridization with wild relatives
journal, September 2013
- Hodgins, Kathryn A.; Lai, Zhao; Oliveira, Luiz O.
- Molecular Ecology Resources, Vol. 14, Issue 1
A rubber transferase activator is necessary for natural rubber biosynthesis in dandelion
journal, April 2015
- Epping, Janina; van Deenen, Nicole; Niephaus, Eva
- Nature Plants, Vol. 1, Issue 5
The tomato cis- prenyltransferase gene family
journal, December 2012
- Akhtar, Tariq A.; Matsuba, Yuki; Schauvinhold, Ines
- The Plant Journal, Vol. 73, Issue 4
Rubber particles from four different species, examined by transmission electron microscopy and electron-paramagnetic-resonance spin labeling, are found to consist of a homogeneous rubber core enclosed by a contiguous, monolayer biomembrane
journal, November 1999
- Cornish, Katrina; Wood, Delilah F.; Windle, John J.
- Planta, Vol. 210, Issue 1
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
journal, November 2009
- Robinson, M. D.; McCarthy, D. J.; Smyth, G. K.
- Bioinformatics, Vol. 26, Issue 1
The rubber tree genome reveals new insights into rubber production and species adaptation
journal, May 2016
- Tang, Chaorong; Yang, Meng; Fang, Yongjun
- Nature Plants, Vol. 2, Issue 6
Seasonal growth, rubber and resin yield characteristics of guayule under natural environmental conditions
journal, May 1997
- Cantú, D. Jasso; Angulo-Sánchez, J. L.; Rodríguez-García, R.
- Industrial Crops and Products, Vol. 6, Issue 2
Alternative sources of natural rubber
journal, April 2000
- Mooibroek, H.; Cornish, K.
- Applied Microbiology and Biotechnology, Vol. 53, Issue 4
De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
journal, July 2013
- Haas, Brian J.; Papanicolaou, Alexie; Yassour, Moran
- Nature Protocols, Vol. 8, Issue 8
A sustainability review of domestic rubber from the guayule plant
journal, August 2015
- Rasutis, Daina; Soratana, Kullapa; McMahan, Colleen
- Industrial Crops and Products, Vol. 70
Polyisoprenoids – Secondary metabolites or physiologically important superlipids?
journal, April 2011
- Surmacz, Liliana; Swiezewska, Ewa
- Biochemical and Biophysical Research Communications, Vol. 407, Issue 4
Biochemistry of natural rubber, a vital raw material, emphasizing biosynthetic rate, molecular weight and compartmentalization, in evolutionarily divergent plant species (1963 to 2000)
journal, January 2001
- Cornish, Katrina
- Natural Product Reports, Vol. 18, Issue 2
Unusual subunits are directly involved in binding substrates for natural rubber biosynthesis in multiple plant species
journal, December 2018
- Cornish, Katrina; Scott, Deborah J.; Xie, Wenshuang
- Phytochemistry, Vol. 156
Molecular cloning, expression and characterization of cDNA encoding cis-prenyltransferases from Hevea brasiliensis: A key factor participating in natural rubber biosynthesis
journal, November 2003
- Asawatreratanakul, Kasem; Zhang, Yuan-Wei; Wititsuwannakul, Dhirayos
- European Journal of Biochemistry, Vol. 270, Issue 23
A two-component enzyme complex is required for dolichol biosynthesis in tomato
journal, May 2015
- Brasher, Megan I.; Surmacz, Liliana; Leong, Bryan
- The Plant Journal, Vol. 82, Issue 6
Dolichol Biosynthesis and Its Effects on the Unfolded Protein Response and Abiotic Stress Resistance in Arabidopsis
journal, July 2008
- Zhang, Hairong; Ohyama, Kiyoshi; Boudet, Julie
- The Plant Cell, Vol. 20, Issue 7
Hypoglycosylation due to dolichol metabolism defects
journal, September 2009
- Denecke, Jonas; Kranz, Christian
- Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease, Vol. 1792, Issue 9
Down-Regulation of Small Rubber Particle Protein Expression Affects Integrity of Rubber Particles and Rubber Content in Taraxacum brevicorniculatum
journal, July 2012
- Hillebrand, Andrea; Post, Janina J.; Wurbs, David
- PLoS ONE, Vol. 7, Issue 7
Elucidation of rubber biosynthesis and accumulation in the rubber producing shrub, guayule (Parthenium argentatum Gray)
journal, November 2017
- Kajiura, Hiroyuki; Suzuki, Nobuaki; Mouri, Hiroshi
- Planta, Vol. 247, Issue 2
A Global Analysis of the Receptor Tyrosine Kinase-Protein Phosphatase Interactome
journal, January 2017
- Yao, Zhong; Darowski, Katelyn; St-Denis, Nicole
- Molecular Cell, Vol. 65, Issue 2
The Yeast RER2 Gene, Identified by Endoplasmic Reticulum Protein Localization Mutations, Encodes cis -Prenyltransferase, a Key Enzyme in Dolichol Synthesis
journal, January 1999
- Sato, Miyuki; Sato, Ken; Nishikawa, Shuh-ichi
- Molecular and Cellular Biology, Vol. 19, Issue 1
Nogo-B receptor is necessary for cellular dolichol biosynthesis and protein N -glycosylation : NgBR is necessary for cellular dolichol biosynthesis
journal, May 2011
- Harrison, Kenneth D.; Park, Eon Joo; Gao, Ningguo
- The EMBO Journal, Vol. 30, Issue 12
Monitoring Protein-Protein Interactions between the Mammalian Integral Membrane Transporters and PDZ-interacting Partners Using a Modified Split-ubiquitin Membrane Yeast Two-hybrid System
journal, April 2008
- Gisler, Serge M.; Kittanakom, Saranya; Fuster, Daniel
- Molecular & Cellular Proteomics, Vol. 7, Issue 7
A genetic system based on split-ubiquitin for the analysis of interactions between membrane proteins in vivo
journal, April 1998
- Stagljar, I.; Korostensky, C.; Johnsson, N.
- Proceedings of the National Academy of Sciences, Vol. 95, Issue 9
A bicistronic transgene system for genetic modification of Parthenium argentatum
journal, February 2018
- Ponciano, Grisel; Dong, Niu; Chen, Grace
- Plant Biotechnology Reports, Vol. 12, Issue 2
Guayule and Russian Dandelion as Alternative Sources of Natural Rubber
journal, January 2007
- van Beilen, Jan B.; Poirier, Yves
- Critical Reviews in Biotechnology, Vol. 27, Issue 4
Silencing the lettuce homologs of small rubber particle protein does not influence natural rubber biosynthesis in lettuce (Lactuca sativa)
journal, May 2015
- Chakrabarty, Romit; Qu, Yang; Ro, Dae-Kyun
- Phytochemistry, Vol. 113
Identification and characterization of a cis , trans -mixed heptaprenyl diphosphate synthase from Arabidopsis thaliana
journal, September 2012
- Kera, Kota; Takahashi, Seiji; Sutoh, Tsuyoshi
- FEBS Journal, Vol. 279, Issue 20
Molecular Cloning, Expression, and Purification of Undecaprenyl Diphosphate Synthase: NO SEQUENCE SIMILARITY BETWEEN
journal, July 1998
- Shimizu, Naoto; Koyama, Tanetoshi; Ogura, Kyozo
- Journal of Biological Chemistry, Vol. 273, Issue 31
Breeding Hevea brasiliensis for yield, growth and SALB resistance for high disease environments
journal, January 2013
- Rivano, Franck; Mattos, Carlos R. R.; Cardoso, Saulo E. A.
- Industrial Crops and Products, Vol. 44
Biorefinery Developments for Advanced Biofuels from a Sustainable Array of Biomass Feedstocks: Survey of Recent Biomass Conversion Research from Agricultural Research Service
journal, June 2016
- Orts, W. J.; McMahan, C. M.
- BioEnergy Research, Vol. 9, Issue 2
Split-Ubiquitin Based Membrane Yeast Two-Hybrid (MYTH) System: A Powerful Tool For Identifying Protein-Protein Interactions
journal, January 2010
- Snider, Jamie; Kittanakom, Saranya; Curak, Jasna
- Journal of Visualized Experiments, Issue 36
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
journal, October 2013
- Tamura, Koichiro; Stecher, Glen; Peterson, Daniel
- Molecular Biology and Evolution, Vol. 30, Issue 12
Different reaction mechanisms for cis- and trans-prenyltransferases
journal, February 2009
- Lu, Yen-Pin; Liu, Hun-Ge; Liang, Po-Huang
- Biochemical and Biophysical Research Communications, Vol. 379, Issue 2
Stimulation of Isopentenyl Pyrophosphate Incorporation into Polyisoprene in Extracts from Guayule Plants ( Parthenium argentatum Gray) by Low Temperature and 2-(3,4-Dichlorophenoxy) Triethylamine
journal, February 1989
- Madhavan, Soundararajan; Greenblatt, Gerald A.; Foster, Michael A.
- Plant Physiology, Vol. 89, Issue 2
Identification of a New Class of Lipid Droplet-Associated Proteins in Plants
journal, July 2013
- Horn, Patrick J.; James, Christopher N.; Gidda, Satinder K.
- Plant Physiology, Vol. 162, Issue 4
Laticifer-Specific cis-Prenyltransferase Silencing Affects the Rubber, Triterpene, and Inulin Content of Taraxacum brevicorniculatum
journal, January 2012
- Post, Janina; van Deenen, Nicole; Fricke, Julia
- Plant Physiology, Vol. 158, Issue 3
Rubber elongation factor from Hevea brasiliensis
journal, November 1989
- Dennis, M. S.; Light, D. R.
- Journal of Biological Chemistry, Vol. 264, Issue 31
Works referencing / citing this record:
Long-Chain Polyisoprenoids Are Synthesized by AtCPT1 in Arabidopsis thaliana
journal, July 2019
- Surowiecki, Przemyslaw; Onysk, Agnieszka; Manko, Katarzyna
- Molecules, Vol. 24, Issue 15
Natural rubber biosynthesis in plants, the rubber transferase complex, and metabolic engineering progress and prospects
journal, June 2019
- Cherian, Sam; Ryu, Stephen Beungtae; Cornish, Katrina
- Plant Biotechnology Journal, Vol. 17, Issue 11
Long-Chain Polyisoprenoids Are Synthesized by AtCPT1 in Arabidopsis thaliana
journal, July 2019
- Surowiecki, Przemyslaw; Onysk, Agnieszka; Manko, Katarzyna
- Molecules, Vol. 24, Issue 15