U.S. Department of EnergyOffice of Scientific and Technical Information
WHONDRS Surface Water Dissolved Organic Carbon and FTICR-MS across Stream Orders in Four United States Watersheds in 2019 and 2020 (v3)
Abstract
This dataset supports the broader Watershed Rules of Life (WROL) study examining spatial and temporal biogeochemical and microbial relationships across the Connecticut River, Deschutes River, Gunnison River, and Willamette River watersheds. The dataset provides geochemistry and organic matter characterization data generated from surface water collected from August 2019 to September 2020 in Colorado, Connecticut, Oregon, and Vermont. Related data were collected and will be published separately in collaboration with P. A. Raymond and B. C. Crump as part of WROL. This dataset is comprised of one folder containing (1) file-level metadata; (2) data dictionary; (3) readme; (4) field metadata; (5) dissolved organic carbon (DOC, measured as non-purgeable organic carbon, NPOC) data and averages; (6) surface water sampling protocol; (7) methods codes; (8) international generic sample number (IGSN) mapping file; and (9) a folder of high resolution characterization of organic matter via 12 Tesla Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS) generated through the Environmental Molecular Sciences Laboratory (EMSL; https://www.pnnl.gov/environmental-molecular-sciences-laboratory). The FTICR folder contains two subfolders, one containing the .xml data files and the other containing instructions for using Formularity (https://omics.pnl.gov/software/formularity) and an R script to process the data based on the user's specific needs. All files are .csv, .pdf,more »
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- Pacific Northwest National Laboratory
- Oregon State University
- Colorado Mesa University
- Yale University
- University of Leeds
- Publication Date:
- DOE Contract Number:
- DOE Award #54737
- Research Org.:
- Environmental System Science Data Infrastructure for a Virtual Ecosystem (ESS-DIVE) (United States); River Corridor and Watershed Biogeochemistry SFA
- Sponsoring Org.:
- U.S. DOE > Office of Science > Biological and Environmental Research (BER)
- Subject:
- 54 ENVIRONMENTAL SCIENCES
- Keywords:
- River corridor; Freshwater; River; Stream; Stream order; Watershed; Biogeochemistry; Hydrobiogeochemical function ; Organic matter; Metabolite; Metabolomics; Mass spectrometry; ESS-DIVE Sample ID and Metadata Reporting Format; ESS-DIVE CSV File Formatting Guidelines Reporting Format; ESS-DIVE File Level Metadata Reporting Format; ESS-DIVE Water-Soil-Sediment Chemistry Reporting Format; EARTH SCIENCE > TERRESTRIAL HYDROSPHERE > SURFACE WATER; NPOC; Non-purgeable organic carbon; DOC; Dissolved organic carbon; FTICR-MS
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- OSTI Identifier:
- 1895159
- DOI:
- https://doi.org/10.15485/1895159
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Citation Formats
Torgeson, Joshua M., Bambakidis, Ted, Bates, Tristan L., Chu, Rosalie, Crump, Byron C., Danczak, Robert E., Forbes, Brieanne, Garayburu-Caruso, Vanessa A., Goldman, Amy E., Logozzo, Laura, Maavara, Taylor, Martin, Edward W., McKever, Sophia A., Powers-McCormack, Beck, Raymond, Peter A., Renteria, Lupita, Toyoda, Jason G., and Stegen, James C. WHONDRS Surface Water Dissolved Organic Carbon and FTICR-MS across Stream Orders in Four United States Watersheds in 2019 and 2020 (v3). United States: N. p., 2022.
Web. doi:10.15485/1895159.
Torgeson, Joshua M., Bambakidis, Ted, Bates, Tristan L., Chu, Rosalie, Crump, Byron C., Danczak, Robert E., Forbes, Brieanne, Garayburu-Caruso, Vanessa A., Goldman, Amy E., Logozzo, Laura, Maavara, Taylor, Martin, Edward W., McKever, Sophia A., Powers-McCormack, Beck, Raymond, Peter A., Renteria, Lupita, Toyoda, Jason G., & Stegen, James C. WHONDRS Surface Water Dissolved Organic Carbon and FTICR-MS across Stream Orders in Four United States Watersheds in 2019 and 2020 (v3). United States. doi:https://doi.org/10.15485/1895159
Torgeson, Joshua M., Bambakidis, Ted, Bates, Tristan L., Chu, Rosalie, Crump, Byron C., Danczak, Robert E., Forbes, Brieanne, Garayburu-Caruso, Vanessa A., Goldman, Amy E., Logozzo, Laura, Maavara, Taylor, Martin, Edward W., McKever, Sophia A., Powers-McCormack, Beck, Raymond, Peter A., Renteria, Lupita, Toyoda, Jason G., and Stegen, James C. 2022.
"WHONDRS Surface Water Dissolved Organic Carbon and FTICR-MS across Stream Orders in Four United States Watersheds in 2019 and 2020 (v3)". United States. doi:https://doi.org/10.15485/1895159. https://www.osti.gov/servlets/purl/1895159. Pub date:Sat Jan 01 00:00:00 EST 2022
@article{osti_1895159,
title = {WHONDRS Surface Water Dissolved Organic Carbon and FTICR-MS across Stream Orders in Four United States Watersheds in 2019 and 2020 (v3)},
author = {Torgeson, Joshua M. and Bambakidis, Ted and Bates, Tristan L. and Chu, Rosalie and Crump, Byron C. and Danczak, Robert E. and Forbes, Brieanne and Garayburu-Caruso, Vanessa A. and Goldman, Amy E. and Logozzo, Laura and Maavara, Taylor and Martin, Edward W. and McKever, Sophia A. and Powers-McCormack, Beck and Raymond, Peter A. and Renteria, Lupita and Toyoda, Jason G. and Stegen, James C.},
abstractNote = {This dataset supports the broader Watershed Rules of Life (WROL) study examining spatial and temporal biogeochemical and microbial relationships across the Connecticut River, Deschutes River, Gunnison River, and Willamette River watersheds. The dataset provides geochemistry and organic matter characterization data generated from surface water collected from August 2019 to September 2020 in Colorado, Connecticut, Oregon, and Vermont. Related data were collected and will be published separately in collaboration with P. A. Raymond and B. C. Crump as part of WROL. This dataset is comprised of one folder containing (1) file-level metadata; (2) data dictionary; (3) readme; (4) field metadata; (5) dissolved organic carbon (DOC, measured as non-purgeable organic carbon, NPOC) data and averages; (6) surface water sampling protocol; (7) methods codes; (8) international generic sample number (IGSN) mapping file; and (9) a folder of high resolution characterization of organic matter via 12 Tesla Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS) generated through the Environmental Molecular Sciences Laboratory (EMSL; https://www.pnnl.gov/environmental-molecular-sciences-laboratory). The FTICR folder contains two subfolders, one containing the .xml data files and the other containing instructions for using Formularity (https://omics.pnl.gov/software/formularity) and an R script to process the data based on the user's specific needs. All files are .csv, .pdf, .R, .ref, or .xml. This data package was originally published in October 2022. It was updated in July 2023 (v2) and again in November 2023 (v3). See the change history section in the readme for more details.},
doi = {10.15485/1895159},
journal = {},
number = ,
volume = ,
place = {United States},
year = {2022},
month = {1}
}
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