WHONDRS Summer 2019 Sampling Campaign: Global River Corridor Surface Water FTICR-MS, NPOC, TN, Anions, Stable Isotopes, Bacterial Abundance, and Dissolved Inorganic Carbon (v8)

Toyoda, Jason G; Goldman, Amy E; Arnon, Shai; Bar-Zeev, Edo; Chu, Rosalie K; Danczak, Robert E; Daly, Rebecca A; Forbes, Brieanne; Garayburu-Caruso, Vanessa A; Graham, Emily B; Lin, Xinming; Moran, James J; Ren, Huiying; Renteria, Lupita; Resch, Charles T; Tfaily, Malak; Tolic, Nikola; Torgeson, Joshua M; Wells, Jacqueline; Wrighton, Kelly C; Stegen, James C; WHONDRS Consortium, The

doi:10.15485/1603775

Title: WHONDRS Summer 2019 Sampling Campaign: Global River Corridor Surface Water FTICR-MS, NPOC, TN, Anions, Stable Isotopes, Bacterial Abundance, and Dissolved Inorganic Carbon (v8)

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Abstract

The WHONDRS Summer 2019 Sampling (S19S) Campaign collected samples in 97 globally distributed river corridor systems between July and September 2019. Surficial streambed sediments were collected at three locations within each site (upstream, midstream, and downstream). Surface water was collected at the downstream site. This dataset includes a portion of the data types produced from the surface water samples and does not include any results from the sediment. Sediment data can be found at https://data.ess-dive.lbl.gov/view/doi:10.15485/1729719. The S19S campaign was designed with the science community to ask questions associated with links among core/transient metabolomes, microbial metabolism, biogeochemical function, and physical properties of watershed and river corridor systems. This data package was originally published in March 2020. It was updated in October 2020 (v2, new and modified files), July 2021 (v3, new and modified files), January 2023 (v4, new and modified files), February 2023 (v5, new and modified files), August 2023 (v6, new and modified files), July 2025 (v7,new and modified files), and August 2026 (v8, new and modified files). Version 8 includes major restructuring of the files and their formats. See the change history section in readme for more details. In addition to a readme, this data package also includes amore »« less

Authors:

;

Pacific Northwest National Laboratory
Ben Gurion University of the Negev
Colorado State University
University of Arizona/Pacific Northwest National Laboratory

Publication Date:: 2019-12-31

DOE Contract Number:: AC02-05CH11231;

Research Org.:: River Corridor and Watershed Biogeochemistry SFA

Sponsoring Org.:: ESS-DIVE; U.S. DOE > Office of Science > Biological and Environmental Research (BER)

Subject:: 18-O; 54 ENVIRONMENTAL SCIENCES; Anions; Bacterial abundance; Biogeochemistry; Carbon; Catchment; Chloride; Deuterium; DIC; Dissolved inorganic carbon; EARTH SCIENCE > TERRESTRIAL HYDROSPHERE > SURFACE WATER; EARTH SCIENCE > TERRESTRIAL HYDROSPHERE > WATER QUALITY/WATER CHEMISTRY > ISOTOPES > STABLE ISOTOPES; ESS-DIVE CSV File Formatting Guidelines Reporting Format; ESS-DIVE File Level Metadata Reporting Format; ESS-DIVE Sample ID and Metadata Reporting Format; Flow cytometry; Fluoride; Freshwater; FTICR; FTICR-MS; Hydrologic exchange; Hydrology; Hyporheic zone; Isotope geochemistry; Mass spectrometry; Metabolite; Metabolomics; Microbiome; Nitrate; Nitrite; NPOC; Organic matter; related identifiers; River; River corridor; Specific conductance; Stream; Sulfate; Total nitrogen; Watershed; WHONDRS

OSTI Identifier:: 1603775

DOI:: https://doi.org/10.15485/1603775

Citation Formats


                    Toyoda, Jason G, Goldman, Amy E, Arnon, Shai, Bar-Zeev, Edo, Chu, Rosalie K, Danczak, Robert E, Daly, Rebecca A, Forbes, Brieanne, Garayburu-Caruso, Vanessa A, Graham, Emily B, Lin, Xinming, Moran, James J, Ren, Huiying, Renteria, Lupita, Resch, Charles T, Tfaily, Malak, Tolic, Nikola, Torgeson, Joshua M, Wells, Jacqueline, Wrighton, Kelly C, Stegen, James C, and WHONDRS Consortium, The. WHONDRS Summer 2019 Sampling Campaign: Global River Corridor Surface Water FTICR-MS, NPOC, TN, Anions, Stable Isotopes, Bacterial Abundance, and Dissolved Inorganic Carbon (v8).  United States: N. p., 2019. 
        Web.  doi:10.15485/1603775.

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                    Toyoda, Jason G, Goldman, Amy E, Arnon, Shai, Bar-Zeev, Edo, Chu, Rosalie K, Danczak, Robert E, Daly, Rebecca A, Forbes, Brieanne, Garayburu-Caruso, Vanessa A, Graham, Emily B, Lin, Xinming, Moran, James J, Ren, Huiying, Renteria, Lupita, Resch, Charles T, Tfaily, Malak, Tolic, Nikola, Torgeson, Joshua M, Wells, Jacqueline, Wrighton, Kelly C, Stegen, James C, & WHONDRS Consortium, The. WHONDRS Summer 2019 Sampling Campaign: Global River Corridor Surface Water FTICR-MS, NPOC, TN, Anions, Stable Isotopes, Bacterial Abundance, and Dissolved Inorganic Carbon (v8).  United States.  doi:https://doi.org/10.15485/1603775

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                    Toyoda, Jason G, Goldman, Amy E, Arnon, Shai, Bar-Zeev, Edo, Chu, Rosalie K, Danczak, Robert E, Daly, Rebecca A, Forbes, Brieanne, Garayburu-Caruso, Vanessa A, Graham, Emily B, Lin, Xinming, Moran, James J, Ren, Huiying, Renteria, Lupita, Resch, Charles T, Tfaily, Malak, Tolic, Nikola, Torgeson, Joshua M, Wells, Jacqueline, Wrighton, Kelly C, Stegen, James C, and WHONDRS Consortium, The. 2019.  
"WHONDRS Summer 2019 Sampling Campaign: Global River Corridor Surface Water FTICR-MS, NPOC, TN, Anions, Stable Isotopes, Bacterial Abundance, and Dissolved Inorganic Carbon (v8)".  United States.  doi:https://doi.org/10.15485/1603775.  https://www.osti.gov/servlets/purl/1603775. Pub date:Tue Dec 31 19:00:00 EST 2019

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@article{osti_1603775,

  title        = {WHONDRS Summer 2019 Sampling Campaign: Global River Corridor Surface Water FTICR-MS, NPOC, TN, Anions, Stable Isotopes, Bacterial Abundance, and Dissolved Inorganic Carbon (v8)},

  author       = {Toyoda, Jason G and Goldman, Amy E and Arnon, Shai and Bar-Zeev, Edo and Chu, Rosalie K and Danczak, Robert E and Daly, Rebecca A and Forbes, Brieanne and Garayburu-Caruso, Vanessa A and Graham, Emily B and Lin, Xinming and Moran, James J and Ren, Huiying and Renteria, Lupita and Resch, Charles T and Tfaily, Malak and Tolic, Nikola and Torgeson, Joshua M and Wells, Jacqueline and Wrighton, Kelly C and Stegen, James C and WHONDRS Consortium, The},

  abstractNote = {The WHONDRS Summer 2019 Sampling (S19S) Campaign collected samples in 97 globally distributed river corridor systems between July and September 2019. Surficial streambed sediments were collected at three locations within each site (upstream, midstream, and downstream). Surface water was collected at the downstream site. This dataset includes a portion of the data types produced from the surface water samples and does not include any results from the sediment. Sediment data can be found at https://data.ess-dive.lbl.gov/view/doi:10.15485/1729719. The S19S campaign was designed with the science community to ask questions associated with links among core/transient metabolomes, microbial metabolism, biogeochemical function, and physical properties of watershed and river corridor systems. This data package was originally published in March 2020. It was updated in October 2020 (v2, new and modified files), July 2021 (v3, new and modified files), January 2023 (v4, new and modified files), February 2023 (v5, new and modified files), August 2023 (v6, new and modified files), July 2025 (v7,new and modified files), and August 2026 (v8, new and modified files). Version 8 includes major restructuring of the files and their formats. See the change history section in readme for more details. In addition to a readme, this data package also includes a file-level metadata (FLMD) file that describes each file and a data dictionary (DD) that describes all column/row headers and variable definitions. This dataset contains (1) readme, (2) data dictionary, (3) file level metadata, (4) sampling protocol, (5) a data checks report, (6) field metadata, (7) international generic sample number (IGSN) mapping file, (8) joint genome institute (JGI) mapping file, and (9) a folder of sample data. The sample data folder contains (1) dissolved organic carbon (DOC, measured as non-purgeable organic carbon, NPOC) and FTICR methods, (2) dissolved inorganic carbon (DIC), (3) stable water isotopes (O and H), (4) specific conductivity, (5) total dissolved nitrogen (TN), (6) anions, (7) flow cytometry bacterial abundance data, (8) laboratory methods, and (9) a folder containing unaligned, peak-picked high resolution characterization of dissolved organic matter from sediment via 12 Tesla Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS) through the Environmental Molecular Sciences Laboratory (EMSL, https://www.pnnl.gov/environmental-molecular-sciences-laboratory), and (12) a folder containing processed FTICR-MS data. All files are .msa, .txt, .spx, .xml, .csv, .pdf, .txt, .html, .jpg, or .jpeg.},

  doi          = {10.15485/1603775},

  journal      = {},

  number       = ,

  volume       = ,

  place        = {United States},

  year         = {2019},

  month        = {12}

}

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DOI: https://doi.org/10.15485/1603775

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