WHONDRS Surface Water and Sediment Non-Purgeable Organic Carbon and FTICR-MS across Glacial Features in Svalbard 2021 (v3)

McKever, Sophia A.; Chu, Rosalie; Danczak, Robert E; Forbes, Brieanne; Garayburu-Caruso, Vanessa A.; Goldman, Amy E.; Hodson, Andrew; Kleber, Gabrielle; Magerl, Leonard; Renteria, Lupita; Toyoda, Jason G.; Yde, Jacob; Stegen, James C.

doi:10.15485/1888571

Title: WHONDRS Surface Water and Sediment Non-Purgeable Organic Carbon and FTICR-MS across Glacial Features in Svalbard 2021 (v3)

Dataset
Other Related Research

Abstract

This dataset supports a broader study examining land-atmosphere gas exchange associated with permafrost and glaciers in Svalbard. The dataset provides geochemistry and organic matter characterization data generated from surface water and sediment. Samples were collected from 8 spatially diverse sites across central Svalbard and also from a more comprehensive temporal and spatial study within one glacial catchment area throughout one summer melt season. Related data were collected and will be published separately in collaboration with Yde and Kleber.This data package was originally published in September 2022. It was updated in March 2023 (v2; new and modified files), and July 2025 (v3; modified files). See the change history section in the readme for details.For details on how to navigate data packages generated by this project, see https://data.ess-dive.lbl.gov/portals/PNNLRiverCorridorSFA/About. This dataset is comprised of one main data folder containing (1) file-level metadata; (2) data dictionary; (3) field metadata; (4) dissolved organic carbon (DOC; measure as non-purgeable organic carbon; NPOC); (5) surface water sampling protocol; (6) sediment extraction protocol; (7) readme; (8) methods codes; (9) international generic sample number (IGSN) mapping file; and (10) folder of high resolution characterization of organic matter via 7 and 12 Tesla (7T and 12T) Fourier transform ion cyclotronmore »« less

Authors:

McKever, Sophia A.;

;

; Hodson, Andrew;

;

Pacific Northwest National Laboratory
University Centre in Svalbard
University of Cambridge / University Centre in Svalbard (UNIS)
UiT The Arctic University of Norway
Western Norway University of Applied Sciences (formerly Høgskulen På Vestlandet)

Publication Date:: Sat Jan 01 04:00:00 UTC 2022

DOE Contract Number:: AC02-05CH11231

Research Org.:: River Corridor and Watershed Biogeochemistry SFA

Sponsoring Org.:: U.S. DOE > Office of Science > Biological and Environmental Research (BER)

Subject:: 54 ENVIRONMENTAL SCIENCES; Biogeochemistry; Cryoconite; EARTH SCIENCE > CRYOSPHERE > GLACIERS/ICE SHEETS; EARTH SCIENCE > TERRESTRIAL HYDROSPHERE > GLACIERS/ICE SHEETS; EARTH SCIENCE > TERRESTRIAL HYDROSPHERE > GROUND WATER; EARTH SCIENCE > TERRESTRIAL HYDROSPHERE > SURFACE WATER; ESS-DIVE CSV File Formatting Guidelines Reporting Format; ESS-DIVE File Level Metadata Reporting Format; ESS-DIVE Sample ID and Metadata Reporting Format; ESS-DIVE Water-Soil-Sediment Chemistry Reporting Format; FTICR-MS; Freshwater; Hydrobiogeochemical function; Hyporheic zone; Mass spectrometry; Metabolite; Metabolomics; NPOC; Non-purgeable organic carbon; Organic matter; River; River corridor; Sediment; Spring; Stream; Watershed

OSTI Identifier:: 1888571

DOI:: https://doi.org/10.15485/1888571

Citation Formats


                    McKever, Sophia A., Chu, Rosalie, Danczak, Robert E, Forbes, Brieanne, Garayburu-Caruso, Vanessa A., Goldman, Amy E., Hodson, Andrew, Kleber, Gabrielle, Magerl, Leonard, Renteria, Lupita, Toyoda, Jason G., Yde, Jacob, and Stegen, James C. WHONDRS Surface Water and Sediment Non-Purgeable Organic Carbon and FTICR-MS across Glacial Features in Svalbard 2021 (v3).  United States: N. p., 2022. 
        Web.  doi:10.15485/1888571.

Copy to clipboard


                    McKever, Sophia A., Chu, Rosalie, Danczak, Robert E, Forbes, Brieanne, Garayburu-Caruso, Vanessa A., Goldman, Amy E., Hodson, Andrew, Kleber, Gabrielle, Magerl, Leonard, Renteria, Lupita, Toyoda, Jason G., Yde, Jacob, & Stegen, James C. WHONDRS Surface Water and Sediment Non-Purgeable Organic Carbon and FTICR-MS across Glacial Features in Svalbard 2021 (v3).  United States.  doi:https://doi.org/10.15485/1888571

Copy to clipboard


                    McKever, Sophia A., Chu, Rosalie, Danczak, Robert E, Forbes, Brieanne, Garayburu-Caruso, Vanessa A., Goldman, Amy E., Hodson, Andrew, Kleber, Gabrielle, Magerl, Leonard, Renteria, Lupita, Toyoda, Jason G., Yde, Jacob, and Stegen, James C. 2022.  
"WHONDRS Surface Water and Sediment Non-Purgeable Organic Carbon and FTICR-MS across Glacial Features in Svalbard 2021 (v3)".  United States.  doi:https://doi.org/10.15485/1888571.  https://www.osti.gov/servlets/purl/1888571. Pub date:Sat Jan 01 04:00:00 UTC 2022

Copy to clipboard


                    
@article{osti_1888571,

  title        = {WHONDRS Surface Water and Sediment Non-Purgeable Organic Carbon and FTICR-MS across Glacial Features in Svalbard 2021 (v3)},

  author       = {McKever, Sophia A. and Chu, Rosalie and Danczak, Robert E and Forbes, Brieanne and Garayburu-Caruso, Vanessa A. and Goldman, Amy E. and Hodson, Andrew and Kleber, Gabrielle and Magerl, Leonard and Renteria, Lupita and Toyoda, Jason G. and Yde, Jacob and Stegen, James C.},

  abstractNote = {This dataset supports a broader study examining land-atmosphere gas exchange associated with permafrost and glaciers in Svalbard. The dataset provides geochemistry and organic matter characterization data generated from surface water and sediment. Samples were collected from 8 spatially diverse sites across central Svalbard and also from a more comprehensive temporal and spatial study within one glacial catchment area throughout one summer melt season. Related data were collected and will be published separately in collaboration with Yde and Kleber.This data package was originally published in September 2022. It was updated in March 2023 (v2; new and modified files), and July 2025 (v3; modified files). See the change history section in the readme for details.For details on how to navigate data packages generated by this project, see https://data.ess-dive.lbl.gov/portals/PNNLRiverCorridorSFA/About. This dataset is comprised of one main data folder containing (1) file-level metadata; (2) data dictionary; (3) field metadata; (4) dissolved organic carbon (DOC; measure as non-purgeable organic carbon; NPOC); (5) surface water sampling protocol; (6) sediment extraction protocol; (7) readme; (8) methods codes; (9) international generic sample number (IGSN) mapping file; and (10) folder of high resolution characterization of organic matter via 7 and 12 Tesla (7T and 12T) Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS) generated through the Environmental Molecular Sciences Laboratory (EMSL; https://www.pnnl.gov/environmental-molecular-sciences-laboratory). The FTICR folder contains two subfolders containing the 7T and 12T .xml data files and another subfolder containing instructions for using Formularity (https://omics.pnl.gov/software/formularity) and an R script to process the data based on the user's specific needs. All files are .csv, .pdf, .R, .ref, or .xml.},

  doi          = {10.15485/1888571},

  journal      = {},

  number       = ,

  volume       = ,

  place        = {United States},

  year         = {Sat Jan 01 04:00:00 UTC 2022},

  month        = {Sat Jan 01 04:00:00 UTC 2022}

}

Copy to clipboard

Dataset:

View Dataset

DOI: https://doi.org/10.15485/1888571

Save / Share:

Export Metadata

Save to My Library

Similar records in DOE Data Explorer and OSTI.GOV collections:

WHONDRS Surface Water Dissolved Organic Carbon and FTICR-MS across Glacial Features in Svalbard 2022

Dataset Renteria, Lupita ; Chu, Rosalie ; Danczak, Robert E. ; ...

This dataset supports a broader study examining climatic forcing of terrestrial greenhouse gas emission through permafrost and glaciers in Svalbard. The dataset provides geochemistry and organic matter characterization data generated from surface water collected from 11 sites across central Svalbard. Data were also collected in 2021 and can be found at https://data.ess-dive.lbl.gov/view/doi:10.15485/1888571. Additional related data were collected and will be published separately in collaboration with Yde and Kleber.This dataset is comprised of one main data folder containing (1) file-level metadata; (2) data dictionary; (3) field metadata; (4) dissolved organic carbon (DOC; measured as non-purgeable organic carbon; NPOC); (5) surface watermore »« less
WHONDRS Surface Water Dissolved Organic Carbon and FTICR-MS across Stream Orders in Four United States Watersheds in 2019 and 2020 (v3)

Dataset Torgeson, Joshua M. ; Bambakidis, Ted ; Bates, Tristan L. ; ...

This dataset supports the broader Watershed Rules of Life (WROL) study examining spatial and temporal biogeochemical and microbial relationships across the Connecticut River, Deschutes River, Gunnison River, and Willamette River watersheds. The dataset provides geochemistry and organic matter characterization data generated from surface water collected from August 2019 to September 2020 in Colorado, Connecticut, Oregon, and Vermont. Related data were collected and will be published separately in collaboration with P. A. Raymond and B. C. Crump as part of WROL. This dataset is comprised of one folder containing (1) file-level metadata; (2) data dictionary; (3) readme; (4) field metadata; (5)more »« less
WHONDRS Surface Water Sampling for Metabolite Biogeography (Geochemistry and Aligned FTICR-MS)

Dataset Stegen, James C ; Goldman, Amy E ; Blackburn, Shannon E ; ...

This dataset is from an ongoing global survey of surface water metabolites to provide understanding of the character of organic matter that may be delivered to subsurface sediments via hydrologic exchange. Data from this survey are published in batches. This first batch contains data from 27 sites. To implement the global survey, free stream sampling kits were provided to interested researchers throughout the world. Samples were collected with minimal constraints in terms of location, but following strict protocols, and shipped to the Environmental Molecular Sciences Laboratory (EMSL) for metabolomic analysis via Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS). Inmore »« less
FTICR-MS and Biochemical Transformation Data from Global Inland River Water and Sediment Associated with: "Organic Matter Transformations are Disconnected Between Surface Water and the Hyporheic Zone"

Dataset Stegen, James C. ; Fansler, Sarah J. ; Tfaily, Malak M. ; ...

This data package is associated with the publication "Organic Matter Transformations are Disconnected Between Surface Water and the Hyporheic Zone" submitted to Biogeosciences (Stegen et al., 2022). The study aims to understand how the diversity of OM transformations varies across surface and subsurface components of river corridors using inland surface water and sediments collected along river corridors across the contiguous United States. Sediment extracts and water samples were analyzed using ultrahigh resolution Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS). This dataset is comprised of one folder (WHONDR_S19S) which contains (1) a subfolder with R scripts used to process themore »« less
WHONDRS Summer 2019 Sampling Campaign: Global River Corridor Sediment FTICR-MS, Dissolved Organic Carbon, Aerobic Respiration, Elemental Composition, Grain Size, Total Nitrogen and Organic Carbon Content, Bacterial Abundance, and Stable Isotopes (v9)

Dataset Goldman, Amy E ; Arnon, Shai ; Bar-Zeev, Edo ; ...

The WHONDRS Summer 2019 Sampling (S19S) Campaign collected samples in 97 globally distributed river corridor systems between July and September 2019. Surficial streambed sediments were collected at three locations within each site (upstream, midstream, and downstream). Surface water was collected at the downstream site. This dataset includes a portion of the data types produced from the sediment samples and does not include any results from the surface water. Surface water data can be found at https://data.ess-dive.lbl.gov/view/doi:10.15485/1603775. The S19S campaign was designed with the science community to ask questions associated with links among core/transient metabolomes, microbial metabolism, biogeochemical function, and physicalmore »« less

Similar Records