Omics-Lethal Human Viruses, Interferon-Stimulated Response Experiment IFNaCL001
Abstract
The purpose of this experiment was to evaluate the host interferon-stimulated cellular response to interferon alpha (IFNα) treatment. Sample data was obtained from human lung adenocarcinoma cells (Calu-3) treated with or without IFNα for mRNA and miRNA transcriptome expression analysis. Secondary host-associated viral dataset downloads contain one or more statistically processed (normalization data transformation) quantitative dataset collections resulting in qualitative expression analyses of primary host-pathogen experimental study designs. Transcriptomics dataset download have a direct relationship to a primary sample submission corresponding to a specific interferon response to viral infection.
- Authors:
-
- Pacific Northwest National Laboratory (PNNL), Richland, WA (United States)
- Univ. of Wisconsin, Madison, WI (United States). School of Veterinary Medicine. Pathology Department
- Publication Date:
- Other Number(s):
- IFNaCL001
NCBI BioProject: PRJNA287907 (mRNA);NCBI BioProject: PRJNA287910 (miRNA);GEO Series: GSE70217 (mRNA);GEO Series: GSE70220 (miRNA)
- DOE Contract Number:
- AC05-76RL01830
- Research Org.:
- Pacific Northwest National Lab. (PNNL), Richland, WA (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC); National Institute of Allergy and Infectious Diseases (NIAID)
- Collaborations:
- Modeling Host Responses to Understand Severe Human Virus Infections Program Project
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES
- Keywords:
- Virology [edam.topic:0781]; Immune Response [GO:0006955]; Human virus [NCIT:C14317]; Ebola virus [NCBITAXON:186536]; Human Interferon [NCIT:C20493]; Interferon Alpha [NCIT:C20494]; Interferon Beta [NCIT:C20495]; Time Sampled Measurement Datasets [IAO:0000584]; Omics [edam.topic:3391]; Gene expression profile data [edam.data:0928]; BioProject Accession Number [NCIT:C175890]; data transformation [SIO:000594]; differential expression analysis [SWO:7000018]; Data Download [schema:DataDownload]
- OSTI Identifier:
- 1661929
- DOI:
- https://doi.org/10.25584/LHVIFNaCL001/1661929
Citation Formats
Anderson, Lindsey N., Eisfeld, Amie J., and Waters, Katrina M. Omics-Lethal Human Viruses, Interferon-Stimulated Response Experiment IFNaCL001. United States: N. p., 2021.
Web. doi:10.25584/LHVIFNaCL001/1661929.
Anderson, Lindsey N., Eisfeld, Amie J., & Waters, Katrina M. Omics-Lethal Human Viruses, Interferon-Stimulated Response Experiment IFNaCL001. United States. doi:https://doi.org/10.25584/LHVIFNaCL001/1661929
Anderson, Lindsey N., Eisfeld, Amie J., and Waters, Katrina M. 2021.
"Omics-Lethal Human Viruses, Interferon-Stimulated Response Experiment IFNaCL001". United States. doi:https://doi.org/10.25584/LHVIFNaCL001/1661929. https://www.osti.gov/servlets/purl/1661929. Pub date:Mon Jan 18 00:00:00 EST 2021
@article{osti_1661929,
title = {Omics-Lethal Human Viruses, Interferon-Stimulated Response Experiment IFNaCL001},
author = {Anderson, Lindsey N. and Eisfeld, Amie J. and Waters, Katrina M.},
abstractNote = {The purpose of this experiment was to evaluate the host interferon-stimulated cellular response to interferon alpha (IFNα) treatment. Sample data was obtained from human lung adenocarcinoma cells (Calu-3) treated with or without IFNα for mRNA and miRNA transcriptome expression analysis. Secondary host-associated viral dataset downloads contain one or more statistically processed (normalization data transformation) quantitative dataset collections resulting in qualitative expression analyses of primary host-pathogen experimental study designs. Transcriptomics dataset download have a direct relationship to a primary sample submission corresponding to a specific interferon response to viral infection.},
doi = {10.25584/LHVIFNaCL001/1661929},
journal = {},
number = ,
volume = ,
place = {United States},
year = {Mon Jan 18 00:00:00 EST 2021},
month = {Mon Jan 18 00:00:00 EST 2021}
}
Works referencing / citing this record:
PNNL DataHub Project: Omics Lethal Human Viruses Project Profiling of the Host Interferon-Stimulated Response to Virus Infection, Processed Experimental Dataset Catalog
dataset, January 2021
- Anderson, Lindsey; McDermott, Jason; Waters, Katrina
- Pacific Northwest National Laboratory 2; PNNL