Genome sequence of the Lebeckia ambigua-nodulating “Burkholderia sprentiae” strain WSM5005T

Reeve, Wayne; De Meyer, Sofie; Terpolilli, Jason; Melino, Vanessa; Ardley, Julie; Rui, Tian; Tiwari, Ravi; Howieson, John; Yates, Ron; O’Hara, Graham; Lu, Megan; Bruce, David; Detter, Chris; Tapia, Roxanne; Han, Cliff; Wei, Chia-Lin; Huntemann, Marcel; Han, James; Chen, I-Min; Mavromatis, Konstantinos; Markowitz, Victor; Szeto, Ernest; Ivanova, Natalia; Mikhailova, Natalia; Ovchinnikova, Galina; Pagani, Ioanna; Pati, Amrita; Goodwin, Lynne; Peters, Lin; Pitluck, Sam; Woyke, Tanja; Kyrpides, Nikos

doi:10.4056/sigs.4558268

Title: Genome sequence of the Lebeckia ambigua-nodulating “Burkholderia sprentiae” strain WSM5005T

Journal Article · Sun Dec 15 00:00:00 EST 2013 · Standards in Genomic Sciences

DOI:https://doi.org/10.4056/sigs.4558268· OSTI ID:1628679

Reeve, Wayne ^[1]; De Meyer, Sofie ^[1]; Terpolilli, Jason ^[1]; Melino, Vanessa ^[1]; Ardley, Julie ^[1]; Rui, Tian ^[1]; Tiwari, Ravi ^[1]; Howieson, John ^[1]; Yates, Ron ^[2]; O’Hara, Graham ^[1]; Lu, Megan ^[3]; Bruce, David ^[3]; Detter, Chris ^[3]; Tapia, Roxanne ^[3]; Han, Cliff ^[3]; Wei, Chia-Lin ^[3]; Huntemann, Marcel ^[3]; Han, James ^[3]; Chen, I-Min ^[4]; Mavromatis, Konstantinos ^[3] more »

Murdoch Univ., WA (Australia). Centre for Rhizobium Studies
Murdoch Univ., WA (Australia). Centre for Rhizobium Studies; Dept. of Agriculture and Food, WA (Australia)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Bioscience Division

“Burkholderia sprentiae” strain WSM5005T is an aerobic, motile, Gram-negative, non-sporeforming rod that was isolated in Australia from an effective N2-fixing root nodule of Lebeckia ambigua collected in Klawer, Western Cape of South Africa, in October 2007. Here we describe the features of “Burkholderia sprentiae” strain WSM5005T , together with the genome sequence and its annotation. The 7,761,063 bp high-quality-draft genome is arranged in 8 scaffolds of 236 contigs, contains 7,147 protein-coding genes and 76 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program.

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Research Organization:: Los Alamos National Laboratory (LANL), Los Alamos, NM (United States); Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States); Lawrence Livermore National Laboratory (LLNL), Livermore, CA (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division

Grant/Contract Number:: AC52-06NA25396; AC02-05CH11231; AC52-07NA27344

OSTI ID:: 1628679

Journal Information:: Standards in Genomic Sciences, Vol. 9, Issue 2; ISSN 1944-3277

Publisher:: BioMed CentralCopyright Statement

Country of Publication:: United States

Language:: English

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Title: Genome sequence of the Lebeckia ambigua-nodulating “Burkholderia sprentiae” strain WSM5005T

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