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Title: Genome sequence of the lupin-nodulating Bradyrhizobium sp. strain WSM1417

Journal Article · · Standards in Genomic Sciences
DOI:https://doi.org/10.4056/sigs.4518260· OSTI ID:1628676
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  1. Murdoch Univ., WA (Australia). Centre for Rhizobium Studies
  2. Murdoch Univ., WA (Australia). Centre for Rhizobium Studies; Dept. of Agriculture and Food, Western Australia (Australia)
  3. USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
  4. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Biological Data Management and Technology Center
  5. Los Alamos National Lab. (LANL), Los Alamos, NM (United States). Biosciences Division
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Bradyrhizobium sp. strain WSM1417 is an aerobic, motile, Gram-negative, non-sporeforming rod that was isolated from an effective nitrogen (N2) fixing root nodule of Lupinus sp. collected in Papudo, Chile, in 1995. However, this microsymbiont is a poorly effective N2 fixer with the legume host Lupinus angustifolius L.; a lupin species of considerable economic importance in both Chile and Australia. The symbiosis formed with L. angustifolius produces less than half of the dry matter achieved by the symbioses with commercial inoculant strains such as Bradyrhizobium sp. strain WSM471. Therefore, WSM1417 is an important candidate strain with which to investigate the genetics of effective N2 fixation in the lupin-bradyrhizobia symbioses. Here we describe the features of Bradyrhizobium sp. strain WSM1417, together with genome sequence information and annotation. The 8,048,963 bp high-quality-draft genome is arranged in a single scaffold of 2 contigs, contains 7,695 protein-coding genes and 77 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program.

Research Organization:
Los Alamos National Laboratory (LANL), Los Alamos, NM (United States); Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States); Lawrence Livermore National Laboratory (LLNL), Livermore, CA (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division
Grant/Contract Number:
AC52-06NA25396; AC02-05CH11231; AC52-07NA27344
OSTI ID:
1628676
Journal Information:
Standards in Genomic Sciences, Vol. 9, Issue 2; ISSN 1944-3277
Publisher:
BioMed CentralCopyright Statement
Country of Publication:
United States
Language:
English

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Related Subjects

59 BASIC BIOLOGICAL SCIENCES
Genetics & Heredity
Microbiology
root-nodule bacteria
nitrogen fixation
rhizobia
Alphaproteobacteria