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Title: Genome sequence of Microvirga lupini strain LUT6T, a novel Lupinus alphaproteobacterial microsymbiont from Texas

Journal Article · · Standards in Genomic Sciences
DOI:https://doi.org/10.4056/sigs.5249382· OSTI ID:1628963
 [1];  [2];  [1];  [3];  [3];  [3];  [3];  [4];  [4];  [4];  [4];  [4];  [4];  [5];  [4];  [4]
  1. Murdoch Univ., WA (Australia). Centre for Rhizobium Studies
  2. Binghampton Univ., New York, NY (United States). Biological Sciences Dept.
  3. Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
  4. USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
  5. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Biological Data Management and Technology Center
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Microvirga lupini LUT6T is an aerobic, non-motile, Gram-negative, non-spore-forming rod that can exist as a soil saprophyte or as a legume microsymbiont of Lupinus texensis. LUT6T was isolated in 2006 from a nodule recovered from the roots of the annual L. texensis growing in Travis Co., Texas. LUT6T forms a highly specific nitrogen-fixing symbiosis with endemic L. texensis and no other Lupinus species can form an effective nitrogen-fixing symbiosis with this isolate. Here we describe the features of M. lupini LUT6T , together with genome sequence information and its annotation. The 9,633,614 bp improved high quality draft genome is arranged into 160 scaffolds of 1,366 contigs containing 10,864 protein-coding genes and 87 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of a DOE Joint Genome Institute 2010 Community Sequencing Project.

Research Organization:
Los Alamos National Laboratory (LANL), Los Alamos, NM (United States); Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division
Grant/Contract Number:
AC02-05CH11231
OSTI ID:
1628963
Journal Information:
Standards in Genomic Sciences, Vol. 9, Issue 3; ISSN 1944-3277
Publisher:
BioMed CentralCopyright Statement
Country of Publication:
United States
Language:
English

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Cited By (1)

Phylogeny and Phylogeography of Rhizobial Symbionts Nodulating Legumes of the Tribe Genisteae journal March 2018

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Related Subjects

59 BASIC BIOLOGICAL SCIENCES
root-nodule bacteria
nitrogen fixation
rhizobia
Alphaproteobacteria