skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: φX216, a P2-like bacteriophage with broad Burkholderia pseudomallei and B. mallei strain infectivity

Journal Article · · BMC Microbiology
 [1];  [2];  [3];  [4];  [2];  [1]
  1. Colorado State Univ., Fort Collins, CO (United States). Dept. of Microbiology, Immunology and Pathology
  2. Colorado School of Mines, Golden, CO (United States). Dept. of Chemistry and Geochemistry
  3. US Army Medical Research Inst. of Infectious Diseases, Fort Detrick, MD (United States)
  4. Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

Background: Burkholderia pseudomallei and B. mallei are closely related Category B Select Agents of bioterrorism and the causative agents of the diseases melioidosis and glanders, respectively. Rapid phage-based diagnostic tools would greatly benefit early recognition and treatment of these diseases. There is extensive strain-to-strain variation in B. pseudomallei genome content due in part to the presence or absence of integrated prophages. Several phages have previously been isolated from B. pseudomallei lysogens, for example φK96243, φ1026b and φ52237. Results: We have isolated a P2-like bacteriophage, φX216, which infects 78% of all B. pseudomallei strains tested. φX216 also infects B. mallei, but not other Burkholderia species, including the closely related B. thailandensis and B. oklahomensis. The nature of the φX216 host receptor remains unclear but evidence indicates that in B. mallei φX216 uses lipopolysaccharide O-antigen but a different receptor in B. pseudomallei. The 37,637 bp genome of φX216 encodes 47 predicted open reading frames and shares 99.8% pairwise identity and an identical strain host range with bacteriophage φ52237. Closely related P2-like prophages appear to be widely distributed among B. pseudomallei strains but both φX216 and φ52237 readily infect prophage carrying strains. Conclusions: The broad strain infectivity and high specificity for B. pseudomallei and B. mallei indicate that φX216 will provide a good platform for the development of phage-based diagnostics for these bacteria.

Research Organization:
Los Alamos National Laboratory (LANL), Los Alamos, NM (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division; Defense Threat Reduction Agency (DTRA)
Grant/Contract Number:
AC52-06NA25396; W81XWH-07-C0061
OSTI ID:
1626478
Journal Information:
BMC Microbiology, Vol. 12, Issue 1; ISSN 1471-2180
Publisher:
BioMed CentralCopyright Statement
Country of Publication:
United States
Language:
English

References (25)

Genetic and phenotypic diversity in Burkholderia: contributions by prophage and phage-like elements journal January 2010
Evolution of Burkholderia pseudomallei in Recurrent Melioidosis journal May 2012
Melioidosis: insights into the pathogenicity of Burkholderia pseudomallei journal April 2006
Glanders: off to the races with Burkholderia mallei journal December 2007
Continuing Evolution of Burkholderia mallei Through Genome Reduction and Large-Scale Rearrangements journal January 2010
Rapid bacteriophage sedimentation in the presence of polyethylene glycol and its application to large-scale virus purification journal March 1970
Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei journal September 2004
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs journal February 2008
A Burkholderia pseudomallei ΔpurM Mutant Is Avirulent in Immunocompetent and Immunodeficient Animals: Candidate Strain for Exclusion from Select-Agent Lists journal April 2010
Genomic Diversity of Burkholderia pseudomallei Clinical Isolates: Subtractive Hybridization Reveals a Burkholderia mallei-Specific Prophage in B. pseudomallei 1026b journal June 2004
Burkholderia pseudomallei Known Siderophores and Hemin Uptake Are Dispensable for Lethal Murine Melioidosis journal June 2012
Multilocus Sequence Typing of Historical Burkholderia pseudomallei Isolates Collected in Southeast Asia from 1964 to 1967 Provides Insight into the Epidemiology of Melioidosis journal August 2006
Heuristic approach to deriving models for gene finding journal October 1999
Isolation and characterization of a novel podovirus which infects burkholderia pseudomallei journal January 2011
The Core and Accessory Genomes of Burkholderia pseudomallei: Implications for Human Melioidosis journal October 2008
Genomic islands from five strains of Burkholderia pseudomallei journal January 2008
Antimicrobial resistance to ceftazidime involving loss of penicillin-binding protein 3 in Burkholderia pseudomallei journal October 2011
A rapid biochemical method for purifying lambda DNA from phage lysates journal January 1986
Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mpl8 and pUC19 vectors journal January 1985
Burkholderia thailandensis E125 Harbors a Temperate Bacteriophage Specific for Burkholderia mallei journal July 2002
Burkholderia pseudomallei genome plasticity associated with genomic island variation journal January 2008
PCR-mediated recombination and mutagenesis: SOEing together tailor-made genes journal April 1995
Novel lytic bacteriophages from soil that lyse Burkholderia pseudomallei: Bacteriophage of B. pseudomallei journal November 2010
Escherichia coli Physiology in Luria-Bertani Broth journal September 2007
Melioidosis and Glanders as Possible Biological Weapons book February 2007

Cited By (5)

Rapid Burkholderia pseudomallei identification and antibiotic resistance determination by bacteriophage amplification and MALDI-TOF MS journal April 2014
Experimental Phage Therapy for Burkholderia pseudomallei Infection journal July 2016
The temperate Burkholderia phage AP3 of the Peduovirinae shows efficient antimicrobial activity against B. cenocepacia of the IIIA lineage journal October 2016
Cloning, expression, and characterization of a peptidoglycan hydrolase from the Burkholderia pseudomallei phage ST79 journal September 2016
Adsorption of bacteriophages on bacterial cells journal December 2017