skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Novel Thylakoid Membrane GreenCut Protein CPLD38 Impacts Accumulation of the Cytochrome b6f Complex and Associated Regulatory Processes

Journal Article · · Journal of Biological Chemistry
 [1];  [2];  [1];  [1];  [1];  [3];  [3];  [4];  [1]
  1. Carnegie Inst. for Science, Stanford, CA (United States). Dept. of Plant Biology
  2. Carnegie Inst. for Science, Stanford, CA (United States). Dept. of Plant Biology; Univ. Pierre et Marie Curie, Paris (France). Centre National de la Recherche Scientifique (CNRS). Inst. de Biologie Physico-Chimique. UMR 7141
  3. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Physical Biosciences Division; Univ. of California, Berkeley, CA (United States). Howard Hughes Medical Inst. Dept. of Platn and Microbial Biology
  4. Univ. Pierre et Marie Curie, Paris (France). Centre National de la Recherche Scientifique (CNRS). Inst. de Biologie Physico-Chimique. UMR 7141

Background: The GreenCut is a group of ~600 green-lineage-specific proteins hypothetically involved in photosynthesis. Results: A Chlamydomonas reinhardtii mutant disrupted for GreenCut gene CPLD38 has a marked reduction in cytochrome b6f and an increase in chlororespiration. Conclusion: CPLD38 is essential for accumulating cytochrome b6f and balancing chlororespiration and photosynthesis. Significance: This analysis demonstrates the importance of a GreenCut protein in photosynthesis. Based on previous comparative genomic analyses, a set of nearly 600 polypeptides was identified that is present in green algae and flowering and nonflowering plants but is not present (or is highly diverged) in nonphotosynthetic organisms. The gene encoding one of these “GreenCut” proteins, CPLD38, is in the same operon as ndhL in most cyanobacteria; the NdhL protein is part of a complex essential for cyanobacterial respiration. A cpld38 mutant of Chlamydomonas reinhardtii does not grow on minimal medium, is high light-sensitive under photoheterotrophic conditions, has lower accumulation of photosynthetic complexes, reduced photosynthetic electron flow to P700+, and reduced photochemical efficiency of photosystem II (PSII); these phenotypes are rescued by a wild-type copy of CPLD38. Single turnover flash experiments and biochemical analyses demonstrated that cytochrome b6f function was severely compromised, and the levels of transcripts and polypeptide subunits of the cytochrome b6f complex were also significantly lower in the cpld38 mutant. Furthermore, subunits of the cytochrome b6f complex in mutant cells turned over much more rapidly than in wild-type cells. Interestingly, PTOX2 and NDA2, two major proteins involved in chlororespiration, were more than 5-fold higher in mutants relative to wild-type cells, suggesting a shift in the cpld38 mutant from photosynthesis toward chlororespiratory metabolism, which is supported by experiments that quantify the reduction state of the plastoquinone pool. Together, these findings support the hypothesis that CPLD38 impacts the stability of the cytochrome b6f complex and possibly plays a role in balancing redox inputs to the quinone pool from photosynthesis and chlororespiration.

Research Organization:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States). National Energy Research Scientific Computing Center (NERSC)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division; National Science Foundation (NSF)
Grant/Contract Number:
AC02-05CH11231; MCB0824469; MCB0235878
OSTI ID:
1625079
Journal Information:
Journal of Biological Chemistry, Vol. 288, Issue 10; ISSN 0021-9258
Publisher:
American Society for Biochemistry and Molecular BiologyCopyright Statement
Country of Publication:
United States
Language:
English

References (53)

Molecular Architecture of the Rotary Motor in ATP Synthase journal November 1999
Altered Fermentative Metabolism in Chlamydomonas reinhardtii Mutants Lacking Pyruvate Formate Lyase and Both Pyruvate Formate Lyase and Alcohol Dehydrogenase journal February 2012
The assembly of cytochrome b6/f complexes: an approach using genetic transformation of the green alga Chlamydomonas reinhardtii. journal March 1994
CyanoBase: the cyanobacteria genome database update 2010 journal October 2009
Plastid terminal oxidase 2 (PTOX2) is the major oxidase involved in chlororespiration in Chlamydomonas journal December 2011
PPDB, the Plant Proteomics Database at Cornell journal October 2008
HCF153, a novel nuclear-encoded factor necessary during a post-translational step in biogenesis of the cytochrome b 6 f complex journal December 2005
A type II NAD(P)H dehydrogenase mediates light-independent plastoquinone reduction in the chloroplast of Chlamydomonas journal December 2008
Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4 journal August 1970
Cyanobacterial photosystem II at 2.9-Å resolution and the role of quinones, lipids, channels and chloride journal February 2009
Characterization of Nda2, a Plastoquinone-reducing Type II NAD(P)H Dehydrogenase in Chlamydomonas Chloroplasts journal December 2008
Photosynthetic growth despite a broken Q-cycle journal May 2011
Duroquinol as an electron donor for chloroplast electron transfer reactions journal April 1978
Structure of the Cytochrome b6f Complex of Oxygenic Photosynthesis: Tuning the Cavity journal November 2003
Structure at 2.8 Â resolution of F1-ATPase from bovine heart mitochondria journal August 1994
Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å journal April 2011
Three-dimensional structure of cyanobacterial photosystem I at 2.5 Å resolution journal June 2001
Flash-induced 519 nm absorption change in green algae journal August 1974
The structure of the central stalk in bovine F1-ATPase at 2.4 Å resolution journal November 2000
An improved staining procedure for the detection of the peroxidase activity of cytochrome P-450 on sodium dodecyl sulfate polyacrylamide gels journal September 1976
The methyl viologen-catalyzed mehler reaction and catalase activity in blue-green algae and Chlamydomonas reinhardi journal September 1971
The Dynamics of Photosynthesis journal December 2008
Changes in Transcript Abundance in Chlamydomonas reinhardtii following Nitrogen Deprivation Predict Diversion of Metabolism journal October 2010
Evidence for a selective destabilization of an integral membrane protein, the cytochrome b6/f complex, during gametogenesis in Chlamydomonas reinhardtii journal February 1992
Chlorophyll fluorescence—a practical guide journal April 2000
Functional Genomics of Eukaryotic Photosynthesis Using Insertional Mutagenesis of Chlamydomonas reinhardtii journal January 2005
Architecture of the Photosynthetic Oxygen-Evolving Center journal March 2004
Purification and Characterization of the Cytochrome b 6 f Complex from Chlamydomonas reinhardtii journal December 1995
The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools journal December 2011
The Chlamydomonas Genome Reveals the Evolution of Key Animal and Plant Functions journal October 2007
Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR journal September 1995
The GreenCut2 Resource, a Phylogenomically Derived Inventory of Proteins Specific to the Plant Lineage journal April 2011
The complex architecture of oxygenic photosynthesis journal December 2004
Translation of cytochrome f is autoregulated through the 5' untranslated region of petA mRNA in Chlamydomonas chloroplasts journal April 1998
DAC Is Involved in the Accumulation of the Cytochrome b 6 / f Complex in Arabidopsis journal October 2012
In-Depth Analysis of the Thylakoid Membrane Proteome of Arabidopsis thaliana Chloroplasts: New Proteins, New Functions, and a Plastid Proteome Database journal January 2004
Difference spectra and extinction coefficients of P700 journal April 1972
The Regulation of Photosynthetic Electron Transport during Nutrient Deprivation in Chlamydomonas reinhardtii journal May 1998
Phylogenomic analysis of the Chlamydomonas genome unmasks proteins potentially involved in photosynthetic function and regulation journal May 2010
Comparative profiling of lipid-soluble antioxidants and transcripts reveals two phases of photo-oxidative stress in a xanthophyll-deficient mutant of Chlamydomonas reinhardtii journal October 2004
Predicting Subcellular Localization of Proteins Based on their N-terminal Amino Acid Sequence journal July 2000
Cyanobacterial NDH-1 complexes: Novel insights and remaining puzzles journal August 2011
Rapid and simple comparison of messenger rna levels using real-time PCR journal December 2006
Reverse genetics in Chlamydomonas: a platform for isolating insertional mutants journal July 2011
New Functions of the Thylakoid Membrane Proteome of Arabidopsis thaliana Revealed by a Simple, Fast, and Versatile Fractionation Strategy journal November 2004
The complete nucleotide sequence of the tryptophan operon of Escherichia coli journal January 1981
Identification and Regulation of Plasma Membrane Sulfate Transporters in Chlamydomonas journal May 2010
The relationship between the quantum yield of photosynthetic electron transport and quenching of chlorophyll fluorescence journal January 1989
Inhibition of Plastocyanin to P 700 + Electron Transfer in Chlamydomonas reinhardtii by Hyperosmotic Stress journal November 2001
An atypical haem in the cytochrome b6f complex journal November 2003
Characterization of Sulfate Transport in Chlamydomonas reinhardtii during Sulfur-Limited and Sulfur-Sufficient Growth journal March 1994
Chlororespiration and the process of carotenoid biosynthesis journal August 2001
Determination of accurate extinction coefficients and simultaneous equations for assaying chlorophylls a and b extracted with four different solvents: verification of the concentration of chlorophyll standards by atomic absorption spectroscopy journal August 1989

Cited By (8)

Algae after dark: mechanisms to cope with anoxic/hypoxic conditions journal March 2015
A repeat protein links Rubisco to form the eukaryotic carbon-concentrating organelle journal May 2016
GreenCut protein CPLD49 of Chlamydomonas reinhardtii associates with thylakoid membranes and is required for cytochrome b 6 f complex accumulation journal May 2018
A Rubisco-binding protein is required for normal pyrenoid number and starch sheath morphology in Chlamydomonas reinhardtii. text January 2019
Large-scale insertional mutagenesis of Chlamydomonas supports phylogenomic functional prediction of photosynthetic genes and analysis of classical acetate-requiring mutants journal April 2015
A repeat protein links Rubisco to form the eukaryotic carbon-concentrating organelle. text January 2016
A Rubisco-binding protein is required for normal pyrenoid number and starch sheath morphology in Chlamydomonas reinhardtii journal August 2019
Identification of Reference and Biomarker Proteins in Chlamydomonas reinhardtii Cultured under Different Stress Conditions journal August 2017