DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Rapid Allylic 1,6 H-Atom Transfer in an Unsaturated Criegee Intermediate

Abstract

Here, a novel allylic 1,6 hydrogen-atom-transfer mechanism is established through infrared activation of the 2-butenal oxide Criegee intermediate, resulting in very rapid unimolecular decay to hydroxyl (OH) radical products. A new precursor, Z/E-1,3-diiodobut-1-ene, is synthesized and photolyzed in the presence of oxygen to generate anew four-carbon Criegee intermediate with extended conjugation across the vinyl and carbonyl oxide groups that facilitates rapid allylic 1,6 H-atom transfer. A low-energy reaction pathway involving isomerization of 2-butenal oxide from a lower-energy (tZZ) conformer to a higher-energy (cZZ) conformer followed by 1,6 hydrogen transfer via a seven-membered ring transition state is predicted theoretically and shown experimentally to yield OH products. The low-lying (tZZ) conformer of 2-butenaloxide is identified based on computed an harmonic frequencies and intensities of its conformers. Experimental IR action spectra recorded in the fundamental CH stretch region with OH product detection by UV laser-induced fluorescence reveal a distinctive IR transition of the low-lying (tZZ) conformer at 2996 cm-1 that results in rapid unimolecular decay to OH products. Statistical RRKM calculations involving a combination of conformational isomerization and unimolecular decay via 1,6 H-transfer yield an effective decay rate keff(E) on the order of 108s-1at ca. 3000 cm-1 in good accord with the experiment.more » Unimolecular decay proceeds with significant enhancement due to quantum mechanical tunneling. A rapid thermal decay rate of ca. 106s-1 is predicted by master-equation modeling of 2-butenal oxide at 298 K, 1 bar. This novel unimolecular decay pathway is expected to increase the nonphotolytic production of OH radicals upon alkene ozonolysis in the troposphere.« less

Authors:
ORCiD logo [1];  [1];  [1]; ORCiD logo [1]; ORCiD logo [1]; ORCiD logo [1]; ORCiD logo [2]; ORCiD logo [1]
  1. Univ. of Pennsylvania, Philadelphia, PA (United States)
  2. Argonne National Lab. (ANL), Lemont, IL (United States)
Publication Date:
Research Org.:
Argonne National Lab. (ANL), Argonne, IL (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Basic Energy Sciences (BES). Chemical Sciences, Geosciences & Biosciences Division; National Science Foundation (NSF); Independent Research Fund Denmark; National Institutes of Health (NIH); Carlsberg Foundation
OSTI Identifier:
1879877
Grant/Contract Number:  
AC02-06CH11357; CHE-1955068; ACI-1548562; CF18–0614; 9036–00016B; 1S10RR023444; 1S10RR022442; 3R01GM118510-03S1; 3R01GM087605-06S1; DGE-1845298
Resource Type:
Accepted Manuscript
Journal Name:
Journal of the American Chemical Society
Additional Journal Information:
Journal Volume: 144; Journal Issue: 13; Journal ID: ISSN 0002-7863
Publisher:
American Chemical Society (ACS)
Country of Publication:
United States
Language:
English
Subject:
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY

Citation Formats

Hansen, Anne S., Qian, Yujie, Sojdak, Christopher A., Kozlowski, Marisa C., Esposito, Vincent J., Francisco, Joseph S., Klippenstein, Stephen J., and Lester, Marsha I. Rapid Allylic 1,6 H-Atom Transfer in an Unsaturated Criegee Intermediate. United States: N. p., 2022. Web. doi:10.1021/jacs.2c00055.
Hansen, Anne S., Qian, Yujie, Sojdak, Christopher A., Kozlowski, Marisa C., Esposito, Vincent J., Francisco, Joseph S., Klippenstein, Stephen J., & Lester, Marsha I. Rapid Allylic 1,6 H-Atom Transfer in an Unsaturated Criegee Intermediate. United States. https://doi.org/10.1021/jacs.2c00055
Hansen, Anne S., Qian, Yujie, Sojdak, Christopher A., Kozlowski, Marisa C., Esposito, Vincent J., Francisco, Joseph S., Klippenstein, Stephen J., and Lester, Marsha I. Mon . "Rapid Allylic 1,6 H-Atom Transfer in an Unsaturated Criegee Intermediate". United States. https://doi.org/10.1021/jacs.2c00055. https://www.osti.gov/servlets/purl/1879877.
@article{osti_1879877,
title = {Rapid Allylic 1,6 H-Atom Transfer in an Unsaturated Criegee Intermediate},
author = {Hansen, Anne S. and Qian, Yujie and Sojdak, Christopher A. and Kozlowski, Marisa C. and Esposito, Vincent J. and Francisco, Joseph S. and Klippenstein, Stephen J. and Lester, Marsha I.},
abstractNote = {Here, a novel allylic 1,6 hydrogen-atom-transfer mechanism is established through infrared activation of the 2-butenal oxide Criegee intermediate, resulting in very rapid unimolecular decay to hydroxyl (OH) radical products. A new precursor, Z/E-1,3-diiodobut-1-ene, is synthesized and photolyzed in the presence of oxygen to generate anew four-carbon Criegee intermediate with extended conjugation across the vinyl and carbonyl oxide groups that facilitates rapid allylic 1,6 H-atom transfer. A low-energy reaction pathway involving isomerization of 2-butenal oxide from a lower-energy (tZZ) conformer to a higher-energy (cZZ) conformer followed by 1,6 hydrogen transfer via a seven-membered ring transition state is predicted theoretically and shown experimentally to yield OH products. The low-lying (tZZ) conformer of 2-butenaloxide is identified based on computed an harmonic frequencies and intensities of its conformers. Experimental IR action spectra recorded in the fundamental CH stretch region with OH product detection by UV laser-induced fluorescence reveal a distinctive IR transition of the low-lying (tZZ) conformer at 2996 cm-1 that results in rapid unimolecular decay to OH products. Statistical RRKM calculations involving a combination of conformational isomerization and unimolecular decay via 1,6 H-transfer yield an effective decay rate keff(E) on the order of 108s-1at ca. 3000 cm-1 in good accord with the experiment. Unimolecular decay proceeds with significant enhancement due to quantum mechanical tunneling. A rapid thermal decay rate of ca. 106s-1 is predicted by master-equation modeling of 2-butenal oxide at 298 K, 1 bar. This novel unimolecular decay pathway is expected to increase the nonphotolytic production of OH radicals upon alkene ozonolysis in the troposphere.},
doi = {10.1021/jacs.2c00055},
journal = {Journal of the American Chemical Society},
number = 13,
volume = 144,
place = {United States},
year = {Mon Mar 28 00:00:00 EDT 2022},
month = {Mon Mar 28 00:00:00 EDT 2022}
}

Works referenced in this record:

CH Stretch Activation of CH 3 CHOO: Deep Tunneling to Hydroxyl Radical Products
journal, March 2019

  • Barber, Victoria P.; Pandit, Shubhrangshu; Esposito, Vincent J.
  • The Journal of Physical Chemistry A, Vol. 123, Issue 13
  • DOI: 10.1021/acs.jpca.8b12324

Selective one-pot synthesis of Z-iodoallylic iodides from propargyl alcohols
journal, August 2006


Measurement and modelling of air pollution and atmospheric chemistry in the U.K. West Midlands conurbation: Overview of the PUMA Consortium project
journal, May 2006


UV Spectroscopic Characterization of Dimethyl- and Ethyl-Substituted Carbonyl Oxides
journal, March 2014

  • Liu, Fang; Beames, Joseph M.; Green, Amy M.
  • The Journal of Physical Chemistry A, Vol. 118, Issue 12
  • DOI: 10.1021/jp412726z

Coupled-cluster techniques for computational chemistry: The CFOUR program package
journal, June 2020

  • Matthews, Devin A.; Cheng, Lan; Harding, Michael E.
  • The Journal of Chemical Physics, Vol. 152, Issue 21
  • DOI: 10.1063/5.0004837

Synthesis, Electronic Spectroscopy, and Photochemistry of Methacrolein Oxide: A Four-Carbon Unsaturated Criegee Intermediate from Isoprene Ozonolysis
journal, August 2019

  • Vansco, Michael F.; Marchetti, Barbara; Trongsiriwat, Nisalak
  • Journal of the American Chemical Society, Vol. 141, Issue 38
  • DOI: 10.1021/jacs.9b05193

Molpro: a general-purpose quantum chemistry program package: Molpro
journal, July 2011

  • Werner, Hans-Joachim; Knowles, Peter J.; Knizia, Gerald
  • Wiley Interdisciplinary Reviews: Computational Molecular Science, Vol. 2, Issue 2
  • DOI: 10.1002/wcms.82

Unified Approach to Furan Natural Products via Phosphine‐Palladium Catalysis
journal, March 2021

  • Chen, Violet Yijang; Kwon, Ohyun
  • Angewandte Chemie International Edition, Vol. 60, Issue 16
  • DOI: 10.1002/anie.202015232

Electronic spectroscopy of methyl vinyl ketone oxide: A four-carbon unsaturated Criegee intermediate from isoprene ozonolysis
journal, December 2018

  • Vansco, Michael F.; Marchetti, Barbara; Lester, Marsha I.
  • The Journal of Chemical Physics, Vol. 149, Issue 24
  • DOI: 10.1063/1.5064716

Ab Initio Computations and Active Thermochemical Tables Hand in Hand: Heats of Formation of Core Combustion Species
journal, August 2017

  • Klippenstein, Stephen J.; Harding, Lawrence B.; Ruscic, Branko
  • The Journal of Physical Chemistry A, Vol. 121, Issue 35
  • DOI: 10.1021/acs.jpca.7b05945

Global data set of biogenic VOC emissions calculated by the MEGAN model over the last 30 years
journal, January 2014

  • Sindelarova, K.; Granier, C.; Bouarar, I.
  • Atmospheric Chemistry and Physics, Vol. 14, Issue 17
  • DOI: 10.5194/acp-14-9317-2014

Ultraviolet Spectrum and Photochemistry of the Simplest Criegee Intermediate CH 2 OO
journal, December 2012

  • Beames, Joseph M.; Liu, Fang; Lu, Lu
  • Journal of the American Chemical Society, Vol. 134, Issue 49
  • DOI: 10.1021/ja310603j

Unimolecular and water reactions of oxygenated and unsaturated Criegee intermediates under atmospheric conditions
journal, January 2022

  • Vereecken, L.; Novelli, A.; Kiendler-Scharr, A.
  • Physical Chemistry Chemical Physics, Vol. 24, Issue 11
  • DOI: 10.1039/D1CP05877K

Conformation-specific spectroscopy of alkyl benzyl radicals: Effects of a radical center on the CH stretch infrared spectrum of an alkyl chain
journal, September 2016

  • Korn, Joseph A.; Tabor, Daniel P.; Sibert, Edwin L.
  • The Journal of Chemical Physics, Vol. 145, Issue 12
  • DOI: 10.1063/1.4963227

Deep tunneling in the unimolecular decay of CH 3 CHOO Criegee intermediates to OH radical products
journal, December 2016

  • Fang, Yi; Liu, Fang; Barber, Victoria P.
  • The Journal of Chemical Physics, Vol. 145, Issue 23
  • DOI: 10.1063/1.4972015

Absolute UV absorption cross sections of dimethyl substituted Criegee intermediate (CH 3 ) 2 COO
journal, June 2016


XSEDE: Accelerating Scientific Discovery
journal, September 2014

  • Towns, John; Cockerill, Timothy; Dahan, Maytal
  • Computing in Science & Engineering, Vol. 16, Issue 5
  • DOI: 10.1109/MCSE.2014.80

Unimolecular Decomposition Rate of the Criegee Intermediate (CH 3 ) 2 COO Measured Directly with UV Absorption Spectroscopy
journal, February 2016

  • Smith, Mica C.; Chao, Wen; Takahashi, Kaito
  • The Journal of Physical Chemistry A, Vol. 120, Issue 27
  • DOI: 10.1021/acs.jpca.5b12124

Aspects of the kinetics and mechanism of the gas-phase reactions of ozone with conjugated dienes
journal, January 2001

  • Lewin, Alison G.; Johnson, David; Price, David W.
  • Physical Chemistry Chemical Physics, Vol. 3, Issue 7
  • DOI: 10.1039/b010006o

Sur la réaction de l'iodure de triméthylsilyle avec les alcools acétyléniques
journal, January 1982


Tunneling effects in the unimolecular decay of (CH 3 ) 2 COO Criegee intermediates to OH radical products
journal, April 2017

  • Fang, Yi; Barber, Victoria P.; Klippenstein, Stephen J.
  • The Journal of Chemical Physics, Vol. 146, Issue 13
  • DOI: 10.1063/1.4979297

Direct Measurements of Unimolecular and Bimolecular Reaction Kinetics of the Criegee Intermediate (CH 3 ) 2 COO
journal, December 2016

  • Chhantyal-Pun, Rabi; Welz, Oliver; Savee, John D.
  • The Journal of Physical Chemistry A, Vol. 121, Issue 1
  • DOI: 10.1021/acs.jpca.6b07810

Unimolecular Decay of Criegee Intermediates to OH Radical Products: Prompt and Thermal Decay Processes
journal, March 2018


The gas-phase ozonolysis of unsaturated volatile organic compounds in the troposphere
journal, January 2008

  • Johnson, David; Marston, George
  • Chemical Society Reviews, Vol. 37, Issue 4
  • DOI: 10.1039/b704260b

Direct Kinetic Measurements of Criegee Intermediate (CH2OO) Formed by Reaction of CH2I with O2
journal, January 2012


Rapid allylic 1,6 H-atom transfer in an unsaturated Criegee intermediate
journalarticle, January 2021


H migration in peroxy radicals under atmospheric conditions
journal, January 2020


Effect of the damping function in dispersion corrected density functional theory
journal, March 2011

  • Grimme, Stefan; Ehrlich, Stephan; Goerigk, Lars
  • Journal of Computational Chemistry, Vol. 32, Issue 7
  • DOI: 10.1002/jcc.21759

Calculated Hydrogen Shift Rate Constants in Substituted Alkyl Peroxy Radicals
journal, September 2018

  • Otkjær, Rasmus V.; Jakobsen, Helene H.; Tram, Camilla Mia
  • The Journal of Physical Chemistry A, Vol. 122, Issue 43
  • DOI: 10.1021/acs.jpca.8b06223

Experimental Evidence of Dioxole Unimolecular Decay Pathway for Isoprene-Derived Criegee Intermediates
journal, April 2020

  • Vansco, Michael F.; Caravan, Rebecca L.; Zuraski, Kristen
  • The Journal of Physical Chemistry A, Vol. 124, Issue 18
  • DOI: 10.1021/acs.jpca.0c02138

Research frontiers in the chemistry of Criegee intermediates and tropospheric ozonolysis
journal, January 2014

  • Taatjes, Craig A.; Shallcross, Dudley E.; Percival, Carl J.
  • Physical Chemistry Chemical Physics, Vol. 16, Issue 5
  • DOI: 10.1039/c3cp52842a

Nascent energy distribution of the Criegee intermediate CH 2 OO from direct dynamics calculations of primary ozonide dissociation
journal, May 2018

  • Pfeifle, Mark; Ma, Yong-Tao; Jasper, Ahren W.
  • The Journal of Chemical Physics, Vol. 148, Issue 17
  • DOI: 10.1063/1.5028117

Selective deuteration illuminates the importance of tunneling in the unimolecular decay of Criegee intermediates to hydroxyl radical products
journal, November 2017

  • Green, Amy M.; Barber, Victoria P.; Fang, Yi
  • Proceedings of the National Academy of Sciences, Vol. 114, Issue 47
  • DOI: 10.1073/pnas.1715014114

Four-Carbon Criegee Intermediate from Isoprene Ozonolysis: Methyl Vinyl Ketone Oxide Synthesis, Infrared Spectrum, and OH Production
journal, July 2018

  • Barber, Victoria P.; Pandit, Shubhrangshu; Green, Amy M.
  • Journal of the American Chemical Society, Vol. 140, Issue 34
  • DOI: 10.1021/jacs.8b06010

Watching a hydroperoxyalkyl radical (•QOOH) dissociate
journal, August 2021


Unimolecular decomposition kinetics of the stabilised Criegee intermediates CH 2 OO and CD 2 OO
journal, January 2018

  • Stone, Daniel; Au, Kendrew; Sime, Samantha
  • Physical Chemistry Chemical Physics, Vol. 20, Issue 38
  • DOI: 10.1039/C8CP05332D

Probing the conformational behavior of the doubly substituted methyl-ethyl Criegee intermediate by FTMW spectroscopy
journal, May 2017

  • Cabezas, Carlos; Guillemin, Jean-Claude; Endo, Yasuki
  • The Journal of Chemical Physics, Vol. 146, Issue 17
  • DOI: 10.1063/1.4982682

A structure–activity relationship for the rate coefficient of H-migration in substituted alkoxy radicals
journal, January 2010

  • Vereecken, L.; Peeters, J.
  • Physical Chemistry Chemical Physics, Vol. 12, Issue 39
  • DOI: 10.1039/c0cp00387e

UV spectroscopic characterization of an alkyl substituted Criegee intermediate CH 3 CHOO
journal, June 2013

  • Beames, Joseph M.; Liu, Fang; Lu, Lu
  • The Journal of Chemical Physics, Vol. 138, Issue 24
  • DOI: 10.1063/1.4810865

General Perturbative Approach for Spectroscopy, Thermodynamics, and Kinetics: Methodological Background and Benchmark Studies
journal, February 2012

  • Bloino, Julien; Biczysko, Malgorzata; Barone, Vincenzo
  • Journal of Chemical Theory and Computation, Vol. 8, Issue 3
  • DOI: 10.1021/ct200814m

Adventures in ozoneland: down the rabbit-hole
journal, January 2011

  • Donahue, Neil M.; Drozd, Greg T.; Epstein, Scott A.
  • Physical Chemistry Chemical Physics, Vol. 13, Issue 23
  • DOI: 10.1039/c0cp02564j

Atmospheric Chemistry of Criegee Intermediates: Unimolecular Reactions and Reactions with Water
journal, October 2016

  • Long, Bo; Bao, Junwei Lucas; Truhlar, Donald G.
  • Journal of the American Chemical Society, Vol. 138, Issue 43
  • DOI: 10.1021/jacs.6b08655

Communication: Thermal unimolecular decomposition of syn-CH 3 CHOO: A kinetic study
journal, October 2016

  • Nguyen, Thanh Lam; McCaslin, Laura; McCarthy, Michael C.
  • The Journal of Chemical Physics, Vol. 145, Issue 13
  • DOI: 10.1063/1.4964393

Reformulation and Solution of the Master Equation for Multiple-Well Chemical Reactions
journal, May 2013

  • Georgievskii, Yuri; Miller, James A.; Burke, Michael P.
  • The Journal of Physical Chemistry A, Vol. 117, Issue 46
  • DOI: 10.1021/jp4060704

Unimolecular decay strongly limits the atmospheric impact of Criegee intermediates
journal, January 2017

  • Vereecken, L.; Novelli, A.; Taraborrelli, D.
  • Physical Chemistry Chemical Physics, Vol. 19, Issue 47
  • DOI: 10.1039/C7CP05541B

Experimental and theoretical studies of the doubly substituted methyl-ethyl Criegee intermediate: Infrared action spectroscopy and unimolecular decay to OH radical products
journal, March 2020

  • Barber, Victoria P.; Hansen, Anne S.; Georgievskii, Yuri
  • The Journal of Chemical Physics, Vol. 152, Issue 9
  • DOI: 10.1063/5.0002422

UV absorption probing of the conformer-dependent reactivity of a Criegee intermediate CH 3 CHOO
journal, January 2014

  • Sheps, Leonid; Scully, Ashley M.; Au, Kendrew
  • Phys. Chem. Chem. Phys., Vol. 16, Issue 48
  • DOI: 10.1039/C4CP04408H

Oxidation capacity of the city air of Santiago, Chile
journal, January 2009

  • Elshorbany, Y. F.; Kurtenbach, R.; Wiesen, P.
  • Atmospheric Chemistry and Physics, Vol. 9, Issue 6
  • DOI: 10.5194/acp-9-2257-2009

Direct Measurements of Conformer-Dependent Reactivity of the Criegee Intermediate CH3CHOO
journal, April 2013


Unimolecular Reaction Rate Measurement of syn -CH 3 CHOO
journal, August 2019

  • Zhou, Xiaohu; Liu, Yiqiang; Dong, Wenrui
  • The Journal of Physical Chemistry Letters, Vol. 10, Issue 17
  • DOI: 10.1021/acs.jpclett.9b01740

Theoretical studies of atmospheric reaction mechanisms in the troposphere
journal, January 2012

  • Vereecken, Luc; Francisco, Joseph S.
  • Chemical Society Reviews, Vol. 41, Issue 19
  • DOI: 10.1039/c2cs35070j

Infrared-driven unimolecular reaction of CH3CHOO Criegee intermediates to OH radical products
journal, September 2014


Direct observation of unimolecular decay of CH 3 CH 2 CHOO Criegee intermediates to OH radical products
journal, July 2016

  • Fang, Yi; Liu, Fang; Klippenstein, Stephen J.
  • The Journal of Chemical Physics, Vol. 145, Issue 4
  • DOI: 10.1063/1.4958992

Anharmonic modeling of the conformation-specific IR spectra of ethyl, n -propyl, and n -butylbenzene
journal, June 2016

  • Tabor, Daniel P.; Hewett, Daniel M.; Bocklitz, Sebastian
  • The Journal of Chemical Physics, Vol. 144, Issue 22
  • DOI: 10.1063/1.4953181

Reactivity Trends within Alkoxy Radical Reactions Responsible for Chain Branching
journal, November 2011

  • Davis, Alexander C.; Francisco, Joseph S.
  • Journal of the American Chemical Society, Vol. 133, Issue 45
  • DOI: 10.1021/ja204806b

Communication: Real time observation of unimolecular decay of Criegee intermediates to OH radical products
journal, February 2016

  • Fang, Yi; Liu, Fang; Barber, Victoria P.
  • The Journal of Chemical Physics, Vol. 144, Issue 6
  • DOI: 10.1063/1.4941768

Direct production of OH radicals upon CH overtone activation of (CH 3 ) 2 COO Criegee intermediates
journal, December 2014

  • Liu, Fang; Beames, Joseph M.; Lester, Marsha I.
  • The Journal of Chemical Physics, Vol. 141, Issue 23
  • DOI: 10.1063/1.4903961

Free radical modelling studies during the UK TORCH Campaign in Summer 2003
journal, January 2007

  • Emmerson, K. M.; Carslaw, N.; Carslaw, D. C.
  • Atmospheric Chemistry and Physics, Vol. 7, Issue 1
  • DOI: 10.5194/acp-7-167-2007

Unimolecular reaction of acetone oxide and its reaction with water in the atmosphere
journal, May 2018

  • Long, Bo; Bao, Junwei Lucas; Truhlar, Donald G.
  • Proceedings of the National Academy of Sciences, Vol. 115, Issue 24
  • DOI: 10.1073/pnas.1804453115

General method for removing resonance singularities in quantum mechanical perturbation theory
journal, March 1996

  • Kuhler, Kathleen M.; Truhlar, Donald G.; Isaacson, Alan D.
  • The Journal of Chemical Physics, Vol. 104, Issue 12
  • DOI: 10.1063/1.471161