Control over single-cell distribution of G1 lengths by WNT governs pluripotency
Abstract
The link between single-cell variation and population-level fate choices lacks a mechanistic explanation despite extensive observations of gene expression and epigenetic variation among individual cells. Here, we found that single human embryonic stem cells (hESCs) have different and biased differentiation potentials toward either neuroectoderm or mesendoderm depending on their G1 lengths before the onset of differentiation. Single-cell variation in G1 length operates in a dynamic equilibrium that establishes a G1 length probability distribution for a population of hESCs and predicts differentiation outcome toward neuroectoderm or mesendoderm lineages. Although sister stem cells generally share G1 lengths, a variable proportion of cells have asymmetric G1 lengths, which maintains the population dispersion. Environmental Wingless-INT (WNT) levels can control the G1 length distribution, apparently as a means of priming the fate of hESC populations once they undergo differentiation. As a downstream mechanism, global 5-hydroxymethylcytosine levels are regulated by G1 length and thereby link G1 length to differentiation outcomes of hESCs. Overall, our findings suggest that intrapopulation heterogeneity in G1 length underlies the pluripotent differentiation potential of stem cell populations.
- Authors:
-
- Univ. of California, Santa Barbara, CA (United States)
- Publication Date:
- Research Org.:
- Univ. of California, Santa Barbara, CA (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC)
- OSTI Identifier:
- 1611177
- Grant/Contract Number:
- SC0008975
- Resource Type:
- Accepted Manuscript
- Journal Name:
- PLoS Biology (Online)
- Additional Journal Information:
- Journal Name: PLoS Biology (Online); Journal Volume: 17; Journal Issue: 9; Journal ID: ISSN 1545-7885
- Publisher:
- Public Library of Science
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 60 APPLIED LIFE SCIENCES; Biochemistry & Molecular Biology; Life Sciences & Biomedicine - Other Topics
Citation Formats
Jang, Jiwon, Han, Dasol, Golkaram, Mahdi, Audouard, Morgane, Liu, Guojing, Bridges, Daniel, Hellander, Stefan, Chialastri, Alex, Dey, Siddharth S., Petzold, Linda R., Kosik, Kenneth S., and Brickman, Joshua Mark. Control over single-cell distribution of G1 lengths by WNT governs pluripotency. United States: N. p., 2019.
Web. doi:10.1371/journal.pbio.3000453.
Jang, Jiwon, Han, Dasol, Golkaram, Mahdi, Audouard, Morgane, Liu, Guojing, Bridges, Daniel, Hellander, Stefan, Chialastri, Alex, Dey, Siddharth S., Petzold, Linda R., Kosik, Kenneth S., & Brickman, Joshua Mark. Control over single-cell distribution of G1 lengths by WNT governs pluripotency. United States. https://doi.org/10.1371/journal.pbio.3000453
Jang, Jiwon, Han, Dasol, Golkaram, Mahdi, Audouard, Morgane, Liu, Guojing, Bridges, Daniel, Hellander, Stefan, Chialastri, Alex, Dey, Siddharth S., Petzold, Linda R., Kosik, Kenneth S., and Brickman, Joshua Mark. Thu .
"Control over single-cell distribution of G1 lengths by WNT governs pluripotency". United States. https://doi.org/10.1371/journal.pbio.3000453. https://www.osti.gov/servlets/purl/1611177.
@article{osti_1611177,
title = {Control over single-cell distribution of G1 lengths by WNT governs pluripotency},
author = {Jang, Jiwon and Han, Dasol and Golkaram, Mahdi and Audouard, Morgane and Liu, Guojing and Bridges, Daniel and Hellander, Stefan and Chialastri, Alex and Dey, Siddharth S. and Petzold, Linda R. and Kosik, Kenneth S. and Brickman, Joshua Mark},
abstractNote = {The link between single-cell variation and population-level fate choices lacks a mechanistic explanation despite extensive observations of gene expression and epigenetic variation among individual cells. Here, we found that single human embryonic stem cells (hESCs) have different and biased differentiation potentials toward either neuroectoderm or mesendoderm depending on their G1 lengths before the onset of differentiation. Single-cell variation in G1 length operates in a dynamic equilibrium that establishes a G1 length probability distribution for a population of hESCs and predicts differentiation outcome toward neuroectoderm or mesendoderm lineages. Although sister stem cells generally share G1 lengths, a variable proportion of cells have asymmetric G1 lengths, which maintains the population dispersion. Environmental Wingless-INT (WNT) levels can control the G1 length distribution, apparently as a means of priming the fate of hESC populations once they undergo differentiation. As a downstream mechanism, global 5-hydroxymethylcytosine levels are regulated by G1 length and thereby link G1 length to differentiation outcomes of hESCs. Overall, our findings suggest that intrapopulation heterogeneity in G1 length underlies the pluripotent differentiation potential of stem cell populations.},
doi = {10.1371/journal.pbio.3000453},
journal = {PLoS Biology (Online)},
number = 9,
volume = 17,
place = {United States},
year = {Thu Sep 26 00:00:00 EDT 2019},
month = {Thu Sep 26 00:00:00 EDT 2019}
}
Web of Science
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- Grandy, Rodrigo A.; Whitfield, Troy W.; Wu, Hai
- Molecular and Cellular Biology, Vol. 36, Issue 4
Noncytotoxic orange and red/green derivatives of DsRed-Express2 for whole-cell labeling
journal, January 2009
- Strack, Rita L.; Bhattacharyya, Dibyendu; Glick, Benjamin S.
- BMC Biotechnology, Vol. 9, Issue 1
5-Hydroxymethylcytosine is associated with enhancers and gene bodies in human embryonic stem cells
journal, January 2011
- Stroud, Hume; Feng, Suhua; Morey Kinney, Shannon
- Genome Biology, Vol. 12, Issue 6
Identification and characterization of subpopulations in undifferentiated ES cell culture
journal, February 2008
- Toyooka, Y.; Shimosato, D.; Murakami, K.
- Development, Vol. 135, Issue 5
Wnt and FGF signals interact to coordinate growth with cell fate specification during limb development
journal, August 2008
- ten Berge, D.; Brugmann, S. A.; Helms, J. A.
- Development, Vol. 135, Issue 19
Functional Heterogeneity of Embryonic Stem Cells Revealed through Translational Amplification of an Early Endodermal Transcript
journal, May 2010
- Canham, Maurice A.; Sharov, Alexei A.; Ko, Minoru S. H.
- PLoS Biology, Vol. 8, Issue 5
Integrating 5-Hydroxymethylcytosine into the Epigenomic Landscape of Human Embryonic Stem Cells
journal, June 2011
- Szulwach, Keith E.; Li, Xuekun; Li, Yujing
- PLoS Genetics, Vol. 7, Issue 6
How the cell cycle impacts chromatin architecture and influences cell fate
journal, February 2015
- Ma, Yiqin; Kanakousaki, Kiriaki; Buttitta, Laura
- Frontiers in Genetics, Vol. 6