Cellulolytic potential under environmental changes in microbial communities from grassland litter
Abstract
We report that in many ecosystems, global changes are likely to profoundly affect microorganisms. In Southern California, changes in precipitation and nitrogen deposition may influence the composition and functional potential of microbial communities and their resulting ability to degrade plant material. To test whether such environmental changes impact the distribution of functional groups involved in leaf litter degradation, we determined how the genomic diversity of microbial communities in a semi-arid grassland ecosystem changed under reduced precipitation or increased N deposition. We monitored communities seasonally over a period of 2 years to place environmental change responses into the context of natural variation. Fungal and bacterial communities displayed strong seasonal patterns, Fungi being mostly detected during the dry season whereas Bacteria were common during wet periods. Most putative cellulose degraders were associated with 33 bacterial genera and predicted to constitute 18% of the microbial community. Precipitation reduction reduced bacterial abundance and cellulolytic potential whereas nitrogen addition did not affect the cellulolytic potential of the microbial community. Finally, we detected a strong correlation between the frequencies of genera of putative cellulose degraders and cellulase genes. Thus, microbial taxonomic composition was predictive of cellulolytic potential. This work provides a framework for how environmental changesmore »
- Authors:
-
- Univ. of California, Irvine, CA (United States). Dept. of Earth System Science; California State Univ. (CalState), Long Beach, CA (United States)
- Univ. of California, Irvine, CA (United States). Dept. of Earth System Science; Univ. of California, Irvine, CA (United States). Dept. of Ecology and Evolutionary Biology
- Univ. of California, Irvine, CA (United States). Dept. of Ecology and Evolutionary Biology
- Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Earth Sciences Division; Univ. of California, Berkeley, CA (United States). Dept. of Environmental Science
- Publication Date:
- Research Org.:
- University of California, Berkeley, CA (United States); Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Biological and Environmental Research (BER)
- OSTI Identifier:
- 1254001
- Alternate Identifier(s):
- OSTI ID: 1256963
- Grant/Contract Number:
- PS02-09ER09-25; OCE-1046297
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Frontiers in Microbiology
- Additional Journal Information:
- Journal Volume: 5; Journal ID: ISSN 1664-302X
- Publisher:
- Frontiers Research Foundation
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 60 APPLIED LIFE SCIENCES; cellulase; metagenomics; leaf litter; global change; microbial community composition; 54 ENVIRONMENTAL SCIENCES; leaflitter
Citation Formats
Berlemont, Renaud, Allison, Steven D., Weihe, Claudia, Lu, Ying, Brodie, Eoin L., Martiny, Jennifer B. H., and Martiny, Adam C. Cellulolytic potential under environmental changes in microbial communities from grassland litter. United States: N. p., 2014.
Web. doi:10.3389/fmicb.2014.00639.
Berlemont, Renaud, Allison, Steven D., Weihe, Claudia, Lu, Ying, Brodie, Eoin L., Martiny, Jennifer B. H., & Martiny, Adam C. Cellulolytic potential under environmental changes in microbial communities from grassland litter. United States. https://doi.org/10.3389/fmicb.2014.00639
Berlemont, Renaud, Allison, Steven D., Weihe, Claudia, Lu, Ying, Brodie, Eoin L., Martiny, Jennifer B. H., and Martiny, Adam C. Tue .
"Cellulolytic potential under environmental changes in microbial communities from grassland litter". United States. https://doi.org/10.3389/fmicb.2014.00639. https://www.osti.gov/servlets/purl/1254001.
@article{osti_1254001,
title = {Cellulolytic potential under environmental changes in microbial communities from grassland litter},
author = {Berlemont, Renaud and Allison, Steven D. and Weihe, Claudia and Lu, Ying and Brodie, Eoin L. and Martiny, Jennifer B. H. and Martiny, Adam C.},
abstractNote = {We report that in many ecosystems, global changes are likely to profoundly affect microorganisms. In Southern California, changes in precipitation and nitrogen deposition may influence the composition and functional potential of microbial communities and their resulting ability to degrade plant material. To test whether such environmental changes impact the distribution of functional groups involved in leaf litter degradation, we determined how the genomic diversity of microbial communities in a semi-arid grassland ecosystem changed under reduced precipitation or increased N deposition. We monitored communities seasonally over a period of 2 years to place environmental change responses into the context of natural variation. Fungal and bacterial communities displayed strong seasonal patterns, Fungi being mostly detected during the dry season whereas Bacteria were common during wet periods. Most putative cellulose degraders were associated with 33 bacterial genera and predicted to constitute 18% of the microbial community. Precipitation reduction reduced bacterial abundance and cellulolytic potential whereas nitrogen addition did not affect the cellulolytic potential of the microbial community. Finally, we detected a strong correlation between the frequencies of genera of putative cellulose degraders and cellulase genes. Thus, microbial taxonomic composition was predictive of cellulolytic potential. This work provides a framework for how environmental changes affect microorganisms responsible for plant litter deconstruction.},
doi = {10.3389/fmicb.2014.00639},
journal = {Frontiers in Microbiology},
number = ,
volume = 5,
place = {United States},
year = {Tue Nov 25 00:00:00 EST 2014},
month = {Tue Nov 25 00:00:00 EST 2014}
}
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Above and belowground community strategies respond to different global change drivers
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- Adair, Karen L.; Lindgreen, Stinus; Poole, Anthony M.
- Freie Universität Berlin
Microbial legacies alter decomposition in response to simulated global change
journal, October 2016
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A genomic perspective on stoichiometric regulation of soil carbon cycling
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Cellulose and hemicellulose decomposition by forest soil bacteria proceeds by the action of structurally variable enzymatic systems
journal, April 2016
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Decoding the complete arsenal for cellulose and hemicellulose deconstruction in the highly efficient cellulose decomposer Paenibacillus O199
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Natural diversity of cellulases, xylanases, and chitinases in bacteria
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Glycoside Hydrolases across Environmental Microbial Communities
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Above and belowground community strategies respond to different global change drivers
text, January 2019
- Adair, Karen L.; Lindgreen, Stinus; Poole, Anthony M.
- Freie Universität Berlin
Editorial: Microbial Responses to Environmental Changes
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Evidence for Ecological Flexibility in the Cosmopolitan Genus Curtobacterium
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