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Title: CD8+ T cells control SIV infection using both cytolytic effects and non-cytolytic suppression of virus production

Journal Article · · Nature Communications

Whether CD8+ T lymphocytes control human immunodeficiency virus infection by cytopathic or non-cytopathic mechanisms is not fully understood. Multiple studies highlighted non-cytopathic effects, but one hypothesis is that cytopathic effects of CD8+ T cells occur before viral production. Here, to examine the role of CD8+ T cells prior to virus production, we treated SIVmac251-infected macaques with an integrase inhibitor combined with a CD8-depleting antibody, or with either reagent alone. We analyzed the ensuing viral dynamics using a mathematical model that included infected cells pre- and post- viral DNA integration to compare different immune effector mechanisms. Macaques receiving the integrase inhibitor alone experienced greater viral load decays, reaching lower nadirs on treatment, than those treated also with the CD8-depleting antibody. Models including CD8+ cell-mediated reduction of viral production (non-cytolytic) were found to best explain the viral profiles across all macaques, in addition an effect in killing infected cells pre-integration (cytolytic) was supported in some of the best models. Our results suggest that CD8+ T cells have both a cytolytic effect on infected cells before viral integration, and a direct, non-cytolytic effect by suppressing viral production.

Research Organization:
Los Alamos National Laboratory (LANL), Los Alamos, NM (United States)
Sponsoring Organization:
USDOE National Nuclear Security Administration (NNSA); National Institutes of Health (NIH); Fundação para a Ciência e Tecnologia
Grant/Contract Number:
89233218CNA000001
OSTI ID:
2222620
Report Number(s):
LA-UR--21-32239
Journal Information:
Nature Communications, Journal Name: Nature Communications Journal Issue: 1 Vol. 14; ISSN 2041-1723
Publisher:
Nature Publishing GroupCopyright Statement
Country of Publication:
United States
Language:
English

References (65)

Differential Impact of In Vivo CD8 + T Lymphocyte Depletion in Controller versus Progressor Simian Immunodeficiency Virus-Infected Macaques journal June 2015
Functional Cure of SIVagm Infection in Rhesus Macaques Results in Complete Recovery of CD4+ T Cells and Is Reverted by CD8+ Cell Depletion journal August 2011
A Nonhuman Primate Model for the Selective Elimination of CD8+ Lymphocytes Using a Mouse-Human Chimeric Monoclonal Antibody journal June 1999
Modeling the within-host dynamics of HIV infection journal September 2013
Biologically-Directed Modeling Reflects Cytolytic Clearance of SIV-Infected Cells In Vivo in Macaques journal September 2012
Dramatic Rise in Plasma Viremia after CD8 + T Cell Depletion in Simian Immunodeficiency Virus–infected Macaques journal March 1999
CD8 + Lymphocytes Are Required for Maintaining Viral Suppression in SIV-Infected Macaques Treated with Short-Term Antiretroviral Therapy journal September 2016
Does Cytolysis by CD8 + T Cells Drive Immune Escape in HIV Infection? journal September 2010
Characterization of CD56/CD16+natural killer (NK) cells: A highly dysfunctional NK subset expanded in HIV-infected viremic individuals journal February 2005
24 Hours in the Life of HIV-1 in a T Cell Line journal January 2013
Distinct HIV-1 Escape Patterns Selected by Cytotoxic T Cells with Identical Epitope Specificity journal February 2013
In Vivo CD8+ T-Cell Suppression of SIV Viremia Is Not Mediated by CTL Clearance of Productively Infected Cells journal January 2010
Model Selection and Multimodel Inference: A Practical Information-Theoretic Approach book January 2002
NK cells in HIV-1 infection: evidence for their role in the control of HIV-1 infection journal January 2009
CD8 + Cell Depletion of SHIV89.6P-Infected Macaques Induces CD4 + T Cell Proliferation that Contributes to Increased Viral Loads journal September 2009
Modeling SIV kinetics supports that cytotoxic response drives natural control and unravels heterogeneous populations of infected cells posted_content January 2020
Administration of an Anti-CD8 Monoclonal Antibody Interferes with the Clearance of Chimeric Simian/Human Immunodeficiency Virus during Primary Infections of Rhesus Macaques journal January 1998
Virus-specific CD8+ cytotoxic T-lymphocyte activity associated with control of viremia in primary human immunodeficiency virus type 1 infection. journal January 1994
Increased Natural Killer Cell Activity in Viremic HIV-1 Infection journal October 2004
Human immunodeficiency virus genetic variation that can escape cytotoxic T cell recognition journal December 1991
CD8+ Lymphocytes Control Viral Replication in SIVmac239-Infected Rhesus Macaques without Decreasing the Lifespan of Productively Infected Cells journal January 2010
Treatment with integrase inhibitor suggests a new interpretation of HIV RNA decay curves that reveals a subset of cells with slow integration journal July 2017
Structural and practical identifiability analysis of partially observed dynamical models by exploiting the profile likelihood journal June 2009
The dynamics of simian immunodeficiency virus after depletion of CD8+ cells journal August 2018
Testing structural identifiability by a simple scaling method journal November 2020
CD8+ T cells promote HIV latency by remodeling CD4+ T cell metabolism to enhance their survival, quiescence, and stemness journal May 2023
HIV-1 Nef protein protects infected primary cells against killing by cytotoxic T lymphocytes journal January 1998
Mechanisms of CD8 + T cell-mediated suppression of HIV/SIV replication journal March 2018
Simian Immunodeficiency Virus Evades a Dominant Epitope-Specific Cytotoxic T Lymphocyte Response Through a Mutation Resulting in the Accelerated Dissociation of Viral Peptide and MHC Class I journal June 2000
Canonical Wnts Mediate CD8 + T Cell Noncytolytic Anti–HIV-1 Activity and Correlate with HIV-1 Clinical Status journal September 2020
Can Non-lytic CD8+ T Cells Drive HIV-1 Escape? journal November 2013
CD8+ lymphocytes can control HIV infection in vitro by suppressing virus replication journal December 1986
The search for the CD8+ cell anti-HIV factor (CAF) journal December 2003
Role of CD8+ Lymphocytes in Control of Simian Immunodeficiency Virus Infection and Resistance to Rechallenge after Transient Early Antiretroviral Treatment journal November 2001
CD8+ lymphocyte control of SIV infection during antiretroviral therapy journal October 2018
Temporal association of cellular immune responses with the initial control of viremia in primary human immunodeficiency virus type 1 syndrome. journal January 1994
Experimental depletion of CD8+ cells in acutely SIVagm-Infected African Green Monkeys results in increased viral replication journal January 2010
Escape of Human Immunodeficiency Virus from Immune Control journal April 1997
Escape Mutations in HIV Infection and its Impact on CD8+ T Cell Responses journal August 2007
Implications of CTL-Mediated Killing of HIV-Infected Cells during the Non-Productive Stage of Infection journal February 2011
Multi-dose Romidepsin Reactivates Replication Competent SIV in Post-antiretroviral Rhesus Macaque Controllers journal September 2016
Parameter estimation and uncertainty quantification for systems biology models journal December 2019
Early Antigen Presentation of Protective HIV-1 KF11Gag and KK10Gag Epitopes from Incoming Viral Particles Facilitates Rapid Recognition of Infected Cells by Specific CD8+T Cells journal March 2013
Determination of virus burst size in vivo using a single-cycle SIV in rhesus macaques journal November 2007
Control of Viremia in Simian Immunodeficiency Virus Infection by CD8+ Lymphocytes journal February 1999
Expression of Chemokine and Inhibitory Receptors on Natural Killer Cells: Effect of Immune Activation and HIV Viremia journal April 2004
Inhibition of adaptive immune responses leads to a fatal clinical outcome in SIV-infected pigtailed macaques but not vervet African green monkeys journal December 2009
Notwithstanding Circumstantial Alibis, Cytotoxic T Cells Can Be Major Killers of HIV-1-Infected Cells journal May 2016
Antiviral pressure exerted by HIV-l-specific cytotoxic T lymphocytes (CTLs) during primary infection demonstrated by rapid selection of CTL escape virus journal February 1997
Innate, non-cytolytic CD8+ T cell-mediated suppression of HIV replication by MHC-independent inhibition of virus transcription journal September 2020
Suppression of simian immunodeficiency virus replication in vitro by CD8+ lymphocytes. journal April 1988
Gag-Specific CD8 + T Lymphocytes Recognize Infected Cells before AIDS-Virus Integration and Viral Protein Expression journal February 2007
CAF-Mediated Human Immunodeficiency Virus (HIV) Type 1 Transcriptional Inhibition Is Distinct from α-Defensin-1 HIV Inhibition journal June 2003
HIV preferentially infects HIV-specific CD4+ T cells journal May 2002
Fas and Fas ligand: lpr and gld mutations journal January 1995
Identification of RANTES, MIP-1alpha, and MIP-1beta as the Major HIV-Suppressive Factors Produced by CD8+ T Cells journal December 1995
Driving the Model to Its Limit: Profile Likelihood Based Model Reduction journal September 2016
Decreased perforin and granzyme B expression in senescent HIV-1-specific cytotoxic T lymphocytes journal February 2005
The presence of protective cytotoxic T lymphocytes does not correlate with shorter lifespans of productively infected cells in HIV-1 infection journal January 2016
Dynamics of Simian Immunodeficiency Virus Two-Long-Terminal-Repeat Circles in the Presence and Absence of CD8 + Cells journal April 2018
Why Don't CD8+ T Cells Reduce the Lifespan of SIV-Infected Cells In Vivo? journal September 2011
Selection and Accumulation of an HIV-1 Escape Mutant by Three Types of HIV-1-Specific Cytotoxic T Lymphocytes Recognizing Wild-Type and/or Escape Mutant Epitopes journal February 2012
Perforin and the granule exocytosis cytotoxicity pathway journal October 2003
CD8 + Memory T Cells Appear Exhausted within Hours of Acute Virus Infection journal September 2013
Inhibition of Adaptive Immune Responses Leads to a Fatal Clinical Outcome in SIV-Infected Pigtailed Macaques but Not Vervet African Green Monkeys journal December 2009