Label-free DNA biosensing by topological light confinement
Abstract
Large-area and transparent all-dielectric metasurfaces sustaining photonic bound states in the continuum (BICs) provide a set of fundamental advantages for ultrasensitive biosensing. BICs bridge the gap of large effective mode volume with large experimental quality factor. Relying on the transduction mechanism of reactive sensing principle, herein, we first numerically study the potential of subwavelength confinement driven by topological decoupling from free space radiation for BIC-based biosensing. Then, we experimentally combine this capability with minimal and low-cost optical setup, applying the devised quasi-BIC resonator for PNA/DNA selective biosensing with real-time monitoring of the binding event. A sensitivity of 20 molecules per micron squared is achieved, i.e. ≃0.01 pg. Further enhancement can easily be envisaged, pointing out the possibility of single-molecule regime. This work aims at a precise and ultrasensitive approach for developing low-cost point-of-care tools suitable for routine disease prescreening analyses in laboratory, also adaptable to industrial production control.
- Authors:
-
- National Research Council (CNR), Naples (Italy). Institute of Applied Sciences and Intelligent Systems
- Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Molecular Foundry
- National Research Council (CNR), Bari (Italy). Institute of Crystallography
- Univ. of Naples Federico II (Italy)
- Publication Date:
- Research Org.:
- Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Basic Energy Sciences (BES). Materials Sciences & Engineering Division
- OSTI Identifier:
- 1861396
- Grant/Contract Number:
- AC02-05CH11231
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Nanophotonics (Online)
- Additional Journal Information:
- Journal Name: Nanophotonics (Online); Journal Volume: 10; Journal Issue: 17; Journal ID: ISSN 2192-8614
- Publisher:
- de Gruyter
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES; biosensors; bound states in the continuum; DNA; photonic crystals
Citation Formats
Zito, Gianluigi, Sanità, Gennaro, Guilcapi Alulema, Bryan, Lara Yépez, Sofía N., Lanzio, Vittorino, Riminucci, Fabrizio, Cabrini, Stefano, Moccia, Maria, Avitabile, Concetta, Lamberti, Annalisa, Mocella, Vito, Rendina, Ivo, and Romano, Silvia. Label-free DNA biosensing by topological light confinement. United States: N. p., 2021.
Web. doi:10.1515/nanoph-2021-0396.
Zito, Gianluigi, Sanità, Gennaro, Guilcapi Alulema, Bryan, Lara Yépez, Sofía N., Lanzio, Vittorino, Riminucci, Fabrizio, Cabrini, Stefano, Moccia, Maria, Avitabile, Concetta, Lamberti, Annalisa, Mocella, Vito, Rendina, Ivo, & Romano, Silvia. Label-free DNA biosensing by topological light confinement. United States. https://doi.org/10.1515/nanoph-2021-0396
Zito, Gianluigi, Sanità, Gennaro, Guilcapi Alulema, Bryan, Lara Yépez, Sofía N., Lanzio, Vittorino, Riminucci, Fabrizio, Cabrini, Stefano, Moccia, Maria, Avitabile, Concetta, Lamberti, Annalisa, Mocella, Vito, Rendina, Ivo, and Romano, Silvia. Wed .
"Label-free DNA biosensing by topological light confinement". United States. https://doi.org/10.1515/nanoph-2021-0396. https://www.osti.gov/servlets/purl/1861396.
@article{osti_1861396,
title = {Label-free DNA biosensing by topological light confinement},
author = {Zito, Gianluigi and Sanità, Gennaro and Guilcapi Alulema, Bryan and Lara Yépez, Sofía N. and Lanzio, Vittorino and Riminucci, Fabrizio and Cabrini, Stefano and Moccia, Maria and Avitabile, Concetta and Lamberti, Annalisa and Mocella, Vito and Rendina, Ivo and Romano, Silvia},
abstractNote = {Large-area and transparent all-dielectric metasurfaces sustaining photonic bound states in the continuum (BICs) provide a set of fundamental advantages for ultrasensitive biosensing. BICs bridge the gap of large effective mode volume with large experimental quality factor. Relying on the transduction mechanism of reactive sensing principle, herein, we first numerically study the potential of subwavelength confinement driven by topological decoupling from free space radiation for BIC-based biosensing. Then, we experimentally combine this capability with minimal and low-cost optical setup, applying the devised quasi-BIC resonator for PNA/DNA selective biosensing with real-time monitoring of the binding event. A sensitivity of 20 molecules per micron squared is achieved, i.e. ≃0.01 pg. Further enhancement can easily be envisaged, pointing out the possibility of single-molecule regime. This work aims at a precise and ultrasensitive approach for developing low-cost point-of-care tools suitable for routine disease prescreening analyses in laboratory, also adaptable to industrial production control.},
doi = {10.1515/nanoph-2021-0396},
journal = {Nanophotonics (Online)},
number = 17,
volume = 10,
place = {United States},
year = {Wed Nov 10 00:00:00 EST 2021},
month = {Wed Nov 10 00:00:00 EST 2021}
}
Works referenced in this record:
Refractive index sensing with optical bound states in the continuum
journal, January 2020
- Maksimov, Dmitrii N.; Gerasimov, Valeriy S.; Romano, Silvia
- Optics Express, Vol. 28, Issue 26
Ultrasensitive hyperspectral imaging and biodetection enabled by dielectric metasurfaces
journal, April 2019
- Yesilkoy, Filiz; Arvelo, Eduardo R.; Jahani, Yasaman
- Nature Photonics, Vol. 13, Issue 6
MicroParticle photophysics illuminates viral bio-sensing
journal, January 2008
- Arnold, S.; Ramjit, R.; Keng, D.
- Faraday Discuss., Vol. 137
Optical response induced by bound states in the continuum in arrays of dielectric spheres
journal, January 2018
- Bulgakov, E. N.; Maksimov, D. N.
- Journal of the Optical Society of America B, Vol. 35, Issue 10
Shift of whispering-gallery modes in microspheres by protein adsorption
journal, January 2003
- Arnold, S.; Khoshsima, M.; Teraoka, I.
- Optics Letters, Vol. 28, Issue 4
Peptide Nucleic Acid-Based Biosensors for Cancer Diagnosis
journal, November 2017
- D’Agata, Roberta; Giuffrida, Maria; Spoto, Giuseppe
- Molecules, Vol. 22, Issue 11
Dark spots along slowly scaling chains of plasmonic nanoparticles
journal, January 2016
- Zito, Gianluigi; Rusciano, Giulia; Sasso, Antonio
- Optics Express, Vol. 24, Issue 12
Bound states in the continuum
journal, July 2016
- Hsu, Chia Wei; Zhen, Bo; Stone, A. Douglas
- Nature Reviews Materials, Vol. 1, Issue 9
Tuning the exponential sensitivity of a bound-state-in-continuum optical sensor
journal, January 2019
- Romano, Silvia; Zito, Gianluigi; Lara Yépez, Sofía N.
- Optics Express, Vol. 27, Issue 13
A review for optical sensors based on photonic crystal cavities
journal, September 2015
- Zhang, Ya-nan; Zhao, Yong; Lv, Ri-qing
- Sensors and Actuators A: Physical, Vol. 233
Surface-Enhanced Raman and Fluorescence Spectroscopy with an All-Dielectric Metasurface
journal, July 2018
- Romano, Silvia; Zito, Gianluigi; Managò, Stefano
- The Journal of Physical Chemistry C, Vol. 122, Issue 34
Giant field enhancement in photonic resonant lattices
journal, October 2015
- Mocella, V.; Romano, S.
- Physical Review B, Vol. 92, Issue 15
Enhancement factor statistics of surface enhanced Raman scattering in multiscale heterostructures of nanoparticles
journal, August 2016
- Zito, Gianluigi; Rusciano, Giulia; Sasso, Antonio
- The Journal of Chemical Physics, Vol. 145, Issue 5
Topological Nature of Optical Bound States in the Continuum
journal, December 2014
- Zhen, Bo; Hsu, Chia Wei; Lu, Ling
- Physical Review Letters, Vol. 113, Issue 25
Topologically enabled ultrahigh-Q guided resonances robust to out-of-plane scattering
journal, October 2019
- Jin, Jicheng; Yin, Xuefan; Ni, Liangfu
- Nature, Vol. 574, Issue 7779
Bloch bound states in the radiation continuum in a periodic array of dielectric rods
journal, November 2014
- Bulgakov, Evgeny N.; Sadreev, Almas F.
- Physical Review A, Vol. 90, Issue 5
Patterning of electrically tunable light-emitting photonic structures demonstrating bound states in the continuum
journal, November 2017
- Penzo, Erika; Romano, Silvia; Wang, Yu
- Journal of Vacuum Science & Technology B, Nanotechnology and Microelectronics: Materials, Processing, Measurement, and Phenomena, Vol. 35, Issue 6
Optical Biosensors Based on Photonic Crystals Supporting Bound States in the Continuum
journal, March 2018
- Romano, Silvia; Lamberti, Annalisa; Masullo, Mariorosario
- Materials, Vol. 11, Issue 4
Observation of trapped light within the radiation continuum
journal, July 2013
- Hsu, Chia Wei; Zhen, Bo; Lee, Jeongwon
- Nature, Vol. 499, Issue 7457, p. 188-191
Electrophoretic mobility shift assay (EMSA) for detecting protein–nucleic acid interactions
journal, July 2007
- Hellman, Lance M.; Fried, Michael G.
- Nature Protocols, Vol. 2, Issue 8
Quasi-BIC Resonant Enhancement of Second-Harmonic Generation in WS 2 Monolayers
journal, June 2020
- Bernhardt, Nils; Koshelev, Kirill; White, Simon J. U.
- Nano Letters, Vol. 20, Issue 7
Single virus detection from the reactive shift of a whispering-gallery mode
journal, December 2008
- Vollmer, F.; Arnold, S.; Keng, D.
- Proceedings of the National Academy of Sciences, Vol. 105, Issue 52, p. 20701-20704
Ultrasensitive Surface Refractive Index Imaging Based on Quasi-Bound States in the Continuum
journal, November 2020
- Romano, Silvia; Mangini, Maria; Penzo, Erika
- ACS Nano, Vol. 14, Issue 11
Surface Bound States in the Continuum
journal, February 2012
- Molina, Mario I.; Miroshnichenko, Andrey E.; Kivshar, Yuri S.
- Physical Review Letters, Vol. 108, Issue 7
Frontiers of light manipulation in natural, metallic, and dielectric nanostructures
journal, January 2021
- De Tommasi, E.; Esposito, E.; Romano, S.
- La Rivista del Nuovo Cimento, Vol. 44, Issue 1
Development of an efficient and low-cost protocol for the manual PNA synthesis by Fmoc chemistry
journal, July 2010
- Avitabile, Concetta; Moggio, Loredana; D’Andrea, Luca D.
- Tetrahedron Letters, Vol. 51, Issue 29
Anisotropy-induced photonic bound states in the continuum
journal, March 2017
- Gomis-Bresco, Jordi; Artigas, David; Torner, Lluis
- Nature Photonics, Vol. 11, Issue 4
Label-free sensing of ultralow-weight molecules with all-dielectric metasurfaces supporting bound states in the continuum
journal, January 2018
- Romano, Silvia; Zito, Gianluigi; Torino, Stefania
- Photonics Research, Vol. 6, Issue 7
Meta-optics and bound states in the continuum
journal, June 2019
- Koshelev, Kirill; Bogdanov, Andrey; Kivshar, Yuri
- Science Bulletin, Vol. 64, Issue 12
Experimental Observation of Optical Bound States in the Continuum
journal, October 2011
- Plotnik, Yonatan; Peleg, Or; Dreisow, Felix
- Physical Review Letters, Vol. 107, Issue 18
Bound states in the continuum in photonic waveguides inspired by defects
journal, August 2008
- Bulgakov, Evgeny N.; Sadreev, Almas F.
- Physical Review B, Vol. 78, Issue 7