High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea
Abstract
Nakamurella lactea DLS-10 T , isolated from rock in Korea, is one of the four type strains of the genus Nakamurella. In this study, we describe the high quality draft genome of N. lactea DLS-10 T and its annotation. A summary of phenotypic data collected from previously published studies was also included. The genome of strain DLS-10 T presents a size of 5.82 Mpb, 5100 protein coding genes, and a C + G content of 68.9%. Based on the genome analysis, emended description of N. lactea in terms of G + C content was also proposed.
- Authors:
-
- Newcastle Univ., Tyne (United Kingdom). School of Biology
- Leibniz Inst. for German Collection of Microorganisms and Cell Cultures, Braunschweig (Germany)
- Helmholtz Centre for Infection Research, Braunschweig (Germany). Central Facility for Microscopy
- USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
- USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); King Abdulaziz Univ., Jeddah (Saudi Arabia). Dept. of Biological Sciences
- Publication Date:
- Research Org.:
- Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Biological and Environmental Research (BER)
- OSTI Identifier:
- 1379675
- Grant/Contract Number:
- AC02-05CH11231
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Standards in Genomic Sciences
- Additional Journal Information:
- Journal Volume: 12; Journal Issue: 1; Journal ID: ISSN 1944-3277
- Publisher:
- BioMed Central
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES; frankineae; rare actinobacteria; nakamurellaceae; bioactive natural product; next generation sequencing
Citation Formats
Nouioui, Imen, Göker, Markus, Carro, Lorena, Montero-Calasanz, Maria del Carmen, Rohde, Manfred, Woyke, Tanja, Kyrpides, Nikos C., and Klenk, Hans-Peter. High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea. United States: N. p., 2017.
Web. doi:10.1186/s40793-016-0216-0.
Nouioui, Imen, Göker, Markus, Carro, Lorena, Montero-Calasanz, Maria del Carmen, Rohde, Manfred, Woyke, Tanja, Kyrpides, Nikos C., & Klenk, Hans-Peter. High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea. United States. https://doi.org/10.1186/s40793-016-0216-0
Nouioui, Imen, Göker, Markus, Carro, Lorena, Montero-Calasanz, Maria del Carmen, Rohde, Manfred, Woyke, Tanja, Kyrpides, Nikos C., and Klenk, Hans-Peter. Fri .
"High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea". United States. https://doi.org/10.1186/s40793-016-0216-0. https://www.osti.gov/servlets/purl/1379675.
@article{osti_1379675,
title = {High quality draft genome of Nakamurella lactea type strain, a rock actinobacterium, and emended description of Nakamurella lactea},
author = {Nouioui, Imen and Göker, Markus and Carro, Lorena and Montero-Calasanz, Maria del Carmen and Rohde, Manfred and Woyke, Tanja and Kyrpides, Nikos C. and Klenk, Hans-Peter},
abstractNote = {Nakamurella lactea DLS-10 T , isolated from rock in Korea, is one of the four type strains of the genus Nakamurella. In this study, we describe the high quality draft genome of N. lactea DLS-10 T and its annotation. A summary of phenotypic data collected from previously published studies was also included. The genome of strain DLS-10 T presents a size of 5.82 Mpb, 5100 protein coding genes, and a C + G content of 68.9%. Based on the genome analysis, emended description of N. lactea in terms of G + C content was also proposed.},
doi = {10.1186/s40793-016-0216-0},
journal = {Standards in Genomic Sciences},
number = 1,
volume = 12,
place = {United States},
year = {Fri Jan 06 00:00:00 EST 2017},
month = {Fri Jan 06 00:00:00 EST 2017}
}
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