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Title: In-line three-dimensional holography of nanocrystalline objects at atomic resolution

Abstract

© 2016, Nature Publishing Group. All rights reserved. Resolution and sensitivity of the latest generation aberration-corrected transmission electron microscopes allow the vast majority of single atoms to be imaged with sub-Ångstrom resolution and their locations determined in an image plane with a precision that exceeds the 1.9-pm wavelength of 300 kV electrons. Such unprecedented performance allows expansion of electron microscopic investigations with atomic resolution into the third dimension. Here we report a general tomographic method to recover the three-dimensional shape of a crystalline particle from high-resolution images of a single projection without the need for sample rotation. The method is compatible with low dose rate electron microscopy, which improves on signal quality, while minimizing electron beam-induced structure modifications even for small particles or surfaces. We apply it to germanium, gold and magnesium oxide particles, and achieve a depth resolution of 1-2 Å, which is smaller than inter-atomic distances.

Authors:
 [1];  [2];  [3]
  1. National Tsing-Hua University, Hsin Chu (Taiwan)
  2. Univ. of Antwerp, Antwerpen (Belgium)
  3. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
Publication Date:
Research Org.:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Basic Energy Sciences (BES)
OSTI Identifier:
1255549
Alternate Identifier(s):
OSTI ID: 1379098
Grant/Contract Number:  
AC02-05CH11231; VF04812N; NSC 96-2628-E-007-017-MY3
Resource Type:
Accepted Manuscript
Journal Name:
Nature Communications
Additional Journal Information:
Journal Volume: 7; Journal ID: ISSN 2041-1723
Publisher:
Nature Publishing Group
Country of Publication:
United States
Language:
English
Subject:
36 MATERIALS SCIENCE

Citation Formats

Chen, F. -R., Van Dyck, D., and Kisielowski, C. In-line three-dimensional holography of nanocrystalline objects at atomic resolution. United States: N. p., 2016. Web. doi:10.1038/ncomms10603.
Chen, F. -R., Van Dyck, D., & Kisielowski, C. In-line three-dimensional holography of nanocrystalline objects at atomic resolution. United States. https://doi.org/10.1038/ncomms10603
Chen, F. -R., Van Dyck, D., and Kisielowski, C. Thu . "In-line three-dimensional holography of nanocrystalline objects at atomic resolution". United States. https://doi.org/10.1038/ncomms10603. https://www.osti.gov/servlets/purl/1255549.
@article{osti_1255549,
title = {In-line three-dimensional holography of nanocrystalline objects at atomic resolution},
author = {Chen, F. -R. and Van Dyck, D. and Kisielowski, C.},
abstractNote = {© 2016, Nature Publishing Group. All rights reserved. Resolution and sensitivity of the latest generation aberration-corrected transmission electron microscopes allow the vast majority of single atoms to be imaged with sub-Ångstrom resolution and their locations determined in an image plane with a precision that exceeds the 1.9-pm wavelength of 300 kV electrons. Such unprecedented performance allows expansion of electron microscopic investigations with atomic resolution into the third dimension. Here we report a general tomographic method to recover the three-dimensional shape of a crystalline particle from high-resolution images of a single projection without the need for sample rotation. The method is compatible with low dose rate electron microscopy, which improves on signal quality, while minimizing electron beam-induced structure modifications even for small particles or surfaces. We apply it to germanium, gold and magnesium oxide particles, and achieve a depth resolution of 1-2 Å, which is smaller than inter-atomic distances.},
doi = {10.1038/ncomms10603},
journal = {Nature Communications},
number = ,
volume = 7,
place = {United States},
year = {Thu Feb 18 00:00:00 EST 2016},
month = {Thu Feb 18 00:00:00 EST 2016}
}

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Cited by: 33 works
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Works referenced in this record:

Atom-by-atom structural and chemical analysis by annular dark-field electron microscopy
journal, March 2010

  • Krivanek, Ondrej L.; Chisholm, Matthew F.; Nicolosi, Valeria
  • Nature, Vol. 464, Issue 7288
  • DOI: 10.1038/nature08879

Electron tomography at 2.4-ångström resolution
journal, March 2012

  • Scott, M. C.; Chen, Chien-Chun; Mecklenburg, Matthew
  • Nature, Vol. 483, Issue 7390
  • DOI: 10.1038/nature10934

Three-dimensional imaging by optical sectioning in the aberration-corrected scanning transmission electron microscope
journal, September 2009

  • Behan, G.; Cosgriff, E. C.; Kirkland, Angus I.
  • Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, Vol. 367, Issue 1903
  • DOI: 10.1098/rsta.2009.0074

Do you believe that atoms stay in place when you observe them in HREM?
journal, January 2015


Quantitative Contrast Evaluation of an Industry-Style Rhodium Nanocatalyst with Single Atom Sensitivity
journal, May 2011


Preface
journal, January 2015


The properties of SIRT, TVM, and DART for 3D imaging of tubular domains in nanocomposite thin-films and sections
journal, December 2014


Aberration-Corrected Imaging of Active Sites on Industrial Catalyst Nanoparticles
journal, May 2007

  • Gontard, Lionel Cervera; Chang, Lan-Yun; Hetherington, Crispin J. D.
  • Angewandte Chemie International Edition, Vol. 46, Issue 20
  • DOI: 10.1002/anie.200604811

Direct structure inversion from exit waves
journal, April 2010


Atomic Dispacement Parameter Nomenclature. Report of a Subcommittee on Atomic Displacement Parameter Nomenclature
journal, September 1996

  • Trueblood, K. N.; Bürgi, H. B.; Burzlaff, H.
  • Acta Crystallographica Section A Foundations of Crystallography, Vol. 52, Issue 5
  • DOI: 10.1107/S0108767396005697

Multiphase Nanostructure of a Quinary Metal Oxide Electrocatalyst Reveals a New Direction for OER Electrocatalyst Design
journal, February 2015

  • Haber, Joel A.; Anzenburg, Eitan; Yano, Junko
  • Advanced Energy Materials, Vol. 5, Issue 10
  • DOI: 10.1002/aenm.201402307

‘Big Bang’ tomography as a new route to atomic-resolution electron tomography
journal, June 2012

  • Van Dyck, Dirk; Jinschek, Joerg R.; Chen, Fu-Rong
  • Nature, Vol. 486, Issue 7402
  • DOI: 10.1038/nature11074

Real-time sub- Å ngstrom imaging of reversible and irreversible conformations in rhodium catalysts and graphene
journal, July 2013


Resolution extension and exit wave reconstruction in complex HREM
journal, January 2004


Dynamic Atomic-Level Rearrangements in Small Gold Particles
journal, August 1986


Radiation damage in the TEM and SEM
journal, August 2004


PVD Growth of FCC Metal Films On Single Crystal Si And Ge Substrates
journal, January 1999

  • Westmacott, K. H.; Hinderberger, S.; Radetic, T.
  • MRS Proceedings, Vol. 562
  • DOI: 10.1557/PROC-562-93

Measuring the Influence of Grain-Boundary Misorientation on Thermal Groove Geometry in Ceramic Polycrystals
journal, June 1999


The Possibility and Implications of Dynamic Nanoparticle Surfaces
journal, September 2013

  • McBride, James R.; Pennycook, Timothy J.; Pennycook, Stephen J.
  • ACS Nano, Vol. 7, Issue 10
  • DOI: 10.1021/nn403478h

Amorphisation and surface morphology development at low-energy ion milling
journal, January 1998


Determining the location and nearest neighbours of aluminium in zeolites with atom probe tomography
journal, July 2015

  • Perea, Daniel E.; Arslan, Ilke; Liu, Jia
  • Nature Communications, Vol. 6, Issue 1
  • DOI: 10.1038/ncomms8589

Depth sectioning with the aberration-corrected scanning transmission electron microscope
journal, February 2006

  • Borisevich, A. Y.; Lupini, A. R.; Pennycook, S. J.
  • Proceedings of the National Academy of Sciences, Vol. 103, Issue 9
  • DOI: 10.1073/pnas.0507105103

Graphene at the Edge: Stability and Dynamics
journal, March 2009


Phase imaging and the evolution of a gold-vacuum interface at atomic resolution
journal, November 2006


Three-Dimensional Elemental Mapping at the Atomic Scale in Bimetallic Nanocrystals
journal, August 2013

  • Goris, Bart; De Backer, Annick; Van Aert, Sandra
  • Nano Letters, Vol. 13, Issue 9
  • DOI: 10.1021/nl401945b

Visualizing and identifying single atoms using electron energy-loss spectroscopy with low accelerating voltage
journal, July 2009

  • Suenaga, Kazu; Sato, Yuta; Liu, Zheng
  • Nature Chemistry, Vol. 1, Issue 5
  • DOI: 10.1038/nchem.282

Three-dimensional atomic imaging of crystalline nanoparticles
journal, February 2011

  • Van Aert, Sandra; Batenburg, Kees J.; Rossell, Marta D.
  • Nature, Vol. 470, Issue 7334
  • DOI: 10.1038/nature09741

Determination of the 3D shape of a nanoscale crystal with atomic resolution from a single image
journal, September 2014

  • Jia, C. L.; Mi, S. B.; Barthel, J.
  • Nature Materials, Vol. 13, Issue 11
  • DOI: 10.1038/nmat4087

Electron channelling based crystallography
journal, June 2007


3D reconstruction of nanocrystalline particles from a single projection
journal, January 2015


Relativistic Hartree–Fock X-ray and electron scattering factors
journal, May 1968


Shape and surface structure of gold nanoparticles under oxidizing conditions
journal, March 2008


Detection of Single Atoms and Buried Defects in Three Dimensions by Aberration-Corrected Electron Microscope with 0.5-Å Information Limit
journal, September 2008


Z-Contrast tomography: a technique in three-dimensional nanostructural analysis based on Rutherford scattering
journal, January 2001

  • Midgley, Paul A.; Weyland, Matthew; Thomas, John Meurig
  • Chemical Communications, Issue 10
  • DOI: 10.1039/b101819c

Maximum-likelihood method for focus-variation image reconstruction in high resolution transmission electron microscopy
journal, August 1996


Aberration-Corrected Imaging of Active Sites on Industrial Catalyst Nanoparticles
journal, May 2007

  • Gontard, Lionel Cervera; Chang, Lan-Yun; Hetherington, Crispin J. D.
  • Angewandte Chemie, Vol. 119, Issue 20
  • DOI: 10.1002/ange.200604811

Multiphase Nanostructure of a Quinary Metal Oxide Electrocatalyst Reveals a New Direction for OER Electrocatalyst Design
journal, February 2015

  • Haber, Joel A.; Anzenburg, Eitan; Yano, Junko
  • Advanced Energy Materials, Vol. 5, Issue 10
  • DOI: 10.1002/aenm.201402307

Aberration-Corrected Imaging of Active Sites on Industrial Catalyst Nanoparticles
journal, May 2007

  • Gontard, Lionel Cervera; Chang, Lan-Yun; Hetherington, Crispin J. D.
  • Angewandte Chemie International Edition, Vol. 46, Issue 20
  • DOI: 10.1002/anie.200604811

An approach to quantitative high-resolution transmission electron microscopy of crystalline materials
journal, May 1995


Radiation damage in the TEM and SEM
journal, August 2004


3D reconstruction of nanocrystalline particles from a single projection
journal, January 2015


Do you believe that atoms stay in place when you observe them in HREM?
journal, January 2015


Electron channelling based crystallography
journal, June 2007


The properties of SIRT, TVM, and DART for 3D imaging of tubular domains in nanocomposite thin-films and sections
journal, December 2014


Three-Dimensional Elemental Mapping at the Atomic Scale in Bimetallic Nanocrystals
journal, August 2013

  • Goris, Bart; De Backer, Annick; Van Aert, Sandra
  • Nano Letters, Vol. 13, Issue 9
  • DOI: 10.1021/nl401945b

Atom-by-atom structural and chemical analysis by annular dark-field electron microscopy
journal, March 2010

  • Krivanek, Ondrej L.; Chisholm, Matthew F.; Nicolosi, Valeria
  • Nature, Vol. 464, Issue 7288
  • DOI: 10.1038/nature08879

Electron tomography at 2.4-ångström resolution
journal, March 2012

  • Scott, M. C.; Chen, Chien-Chun; Mecklenburg, Matthew
  • Nature, Vol. 483, Issue 7390
  • DOI: 10.1038/nature10934

Visualizing and identifying single atoms using electron energy-loss spectroscopy with low accelerating voltage
journal, July 2009

  • Suenaga, Kazu; Sato, Yuta; Liu, Zheng
  • Nature Chemistry, Vol. 1, Issue 5
  • DOI: 10.1038/nchem.282

Determining the location and nearest neighbours of aluminium in zeolites with atom probe tomography
journal, July 2015

  • Perea, Daniel E.; Arslan, Ilke; Liu, Jia
  • Nature Communications, Vol. 6, Issue 1
  • DOI: 10.1038/ncomms8589

Depth sectioning with the aberration-corrected scanning transmission electron microscope
journal, February 2006

  • Borisevich, A. Y.; Lupini, A. R.; Pennycook, S. J.
  • Proceedings of the National Academy of Sciences, Vol. 103, Issue 9
  • DOI: 10.1073/pnas.0507105103

Three-dimensional imaging by optical sectioning in the aberration-corrected scanning transmission electron microscope
journal, September 2009

  • Behan, G.; Cosgriff, E. C.; Kirkland, Angus I.
  • Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, Vol. 367, Issue 1903
  • DOI: 10.1098/rsta.2009.0074

Dynamic Atomic-Level Rearrangements in Small Gold Particles
journal, August 1986


Works referencing / citing this record:

Discovering Hidden Material Properties of MgCl 2 at Atomic Resolution with Structured Temporal Electron Illumination of Picosecond Time Resolution
journal, January 2019

  • Kisielowski, Christian; Specht, Petra; Freitag, Bert
  • Advanced Functional Materials, Vol. 29, Issue 11
  • DOI: 10.1002/adfm.201807818

Localization of Yttrium Segregation within YSZ Grain Boundary Dislocation Cores
journal, August 2018

  • Sánchez-Santolino, Gabriel; Salafranca, Juan; Pantelides, Sokrates T.
  • physica status solidi (a), Vol. 215, Issue 19
  • DOI: 10.1002/pssa.201800349

On the pressing need to address beam–sample interactions in atomic resolution electron microscopy
journal, November 2015


Step edge structures on the anatase TiO 2 (001) surface studied by atomic-resolution TEM and STM
journal, January 2018


Depth sensitive imaging of graphene with an atomic resolution microscope
journal, December 2018

  • Morishita, Shigeyuki; Senga, Ryosuke; Lin, Yung-Chang
  • Applied Physics Letters, Vol. 113, Issue 23
  • DOI: 10.1063/1.5053926

Prospects for atomic resolution in-line holography for a 3D determination of atomic structures from single projections
journal, February 2017

  • Chen, F. -R.; Kisielowski, C.; Van Dyck, D.
  • Advanced Structural and Chemical Imaging, Vol. 3, Issue 1
  • DOI: 10.1186/s40679-017-0041-6

Atomic Configuration of Point Defect Clusters in Ion-Irradiated Silicon Carbide
journal, November 2017


Prospects for atomic resolution in-line holography for a 3D determination of atomic structures from single projections
journal, February 2017

  • Chen, F. -R.; Kisielowski, C.; Van Dyck, D.
  • Advanced Structural and Chemical Imaging, Vol. 3, Issue 1
  • DOI: 10.1186/s40679-017-0041-6