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Draft Genome Assembly of Neisseria lactamica Type Strain A7515

Journal Article · · Genome Announcements
 [1];  [2];  [2];  [3];  [2];  [2];  [2];  [4];  [4];  [3];  [4];  [5];  [5];  [5];  [3];  [2];  [2]
  1. U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Diagnostic Systems Division (DSD); DOE/OSTI
  2. Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
  3. Naval Medical Research Center (NMRC), Frederick, Fort Detrick, MD (United States); Henry M. Jackson Foundation, Bethesda, MD (United States)
  4. U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Diagnostic Systems Division (DSD)
  5. U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Center for Genome Sciences (CGS)
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We present the scaffolded genome assembly of Neisseria lactamica type strain A7515 (ATCC 23970) as submitted to NCBI under accession no. JOVI00000000. This type strain of the lactose-fermenting Neisseria species is often used in quality control testing and intra-genus phylogenetic analyses. The assembly includes four contigs placed into a single scaffold.

Research Organization:
Los Alamos National Laboratory (LANL), Los Alamos, NM (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division
OSTI ID:
1629330
Journal Information:
Genome Announcements, Journal Name: Genome Announcements Journal Issue: 5 Vol. 2; ISSN 2169-8287
Publisher:
American Society for Microbiology
Country of Publication:
United States
Language:
English

References (11)

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Base-Calling of Automated Sequencer Traces Using Phred.  I. Accuracy Assessment journal March 1998
Solexa Ltd journal June 2004
Base-Calling of Automated Sequencer Traces Using Phred. II. Error Probabilities journal March 1998
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs journal February 2008
Conservation of Meningococcal Antigens in the Genus Neisseria journal July 2013
Genome sequencing in microfabricated high-density picolitre reactors journal July 2005
Neisseria lactamicus sp. n., a Lactose-fermenting Species Resembling Neisseria meningitidis journal January 1969
Genome Sequencing Reveals Widespread Virulence Gene Exchange among Human Neisseria Species journal July 2010
ALLPATHS: De novo assembly of whole-genome shotgun microreads journal February 2008
Independent evolution of the core and accessory gene sets in the genus Neisseria: insights gained from the genome of Neisseria lactamica isolate 020-06 journal November 2010

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59 BASIC BIOLOGICAL SCIENCES