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Draft Genome Assembly of Ralstonia pickettii Type Strain K-288 (ATCC 27853)

Journal Article · · Genome Announcements
 [1];  [2];  [3];  [4];  [2];  [2];  [3];  [4];  [3];  [2];  [2];  [2];  [4];  [2]
  1. U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Diagnostic Systems Division (DSD); DOE/OSTI
  2. U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Diagnostic Systems Division (DSD)
  3. Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
  4. U.S. Army Edgewood Chemical Biological Center (ECBC), Aberdeen Proving Ground, Aberdeen, MD (United States)
We present the genome assembly of Ralstonia pickettii K-288 (ATCC 27511), consisting of 27 contigs placed into a single scaffold. This 4.76-Mbp genome has 64.0% GC content and 4,425 coding sequences. Because this is the type strain, inclusion of its data set among other Ralstonia genomes should provide a historical genomic perspective.
Research Organization:
Los Alamos National Laboratory (LANL), Los Alamos, NM (United States)
Sponsoring Organization:
Defense Threat Reduction Agency (DTRA), Joint Science and Technology Office; USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division
OSTI ID:
1629266
Journal Information:
Genome Announcements, Journal Name: Genome Announcements Journal Issue: 5 Vol. 2; ISSN 2169-8287
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English

References (8)

Ralstonia pickettii: a persistent Gram-negative nosocomial infectious organism journal March 2006
Pseudomonas pickettii, a New Species of Clinical Origin Related to Pseudomonas solanacearum journal January 1973
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs journal February 2008
ALLPATHS: De novo assembly of whole-genome shotgun microreads journal February 2008
Base-Calling of Automated Sequencer Traces Using Phred.  I. Accuracy Assessment journal March 1998
Base-Calling of Automated Sequencer Traces Using Phred. II. Error Probabilities journal March 1998
Consed: A Graphical Tool for Sequence Finishing journal March 1998
Ralstonia pickettii in environmental biotechnology: potential and applications journal October 2007

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