Genome Assembly of Serratia marcescens Type Strain ATCC 13880

Daligault, H. E.; Davenport, K. W.; Minogue, T. D.; Broomall, S. M.; Bruce, D. C.; Chain, P. S.; Coyne, S. R.; Gibbons, H. S.; Jaissle, J.; Rosenzweig, C. N.; Scholz, M.; Teshima, H.; Johnson, S. L.

doi:10.1128/genomeA.00967-14

Genome Assembly of Serratia marcescens Type Strain ATCC 13880

Journal Article · Thu Sep 04 00:00:00 EDT 2014 · Genome Announcements

DOI:https://doi.org/10.1128/genomeA.00967-14· OSTI ID:1629268

Daligault, H. E. ^[1]; Davenport, K. W. ^[2]; Minogue, T. D. ^[3]; Broomall, S. M. ^[4]; Bruce, D. C. ^[2]; Chain, P. S. ^[2]; Coyne, S. R. ^[3]; Gibbons, H. S. ^[4]; Jaissle, J. ^[3]; Rosenzweig, C. N. ^[4]; Scholz, M. ^[2]; Teshima, H. ^[2]; Johnson, S. L. ^[2]

U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Diagnostic Systems Division (DSD); DOE/OSTI
U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Diagnostic Systems Division (DSD)
Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
U.S. Army Edgewood Chemical Biological Center (ECBC), Aberdeen Proving Ground, MD (United States)

Serratia marcescens ATCC 13880 is the type strain of the species and a commonly used quality control strain. Here, we present the annotated genome assembly of 5.13 Mbp (59.8% GC content) as submitted to NCBI under accession no. JOVM00000000.

Research Organization:: Los Alamos National Laboratory (LANL), Los Alamos, NM (United States)

Sponsoring Organization:: Defense Threat Reduction Agency (DTRA), Joint Science and Technology Office; USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division

OSTI ID:: 1629268

Journal Information:: Genome Announcements, Journal Name: Genome Announcements Journal Issue: 5 Vol. 2; ISSN 2169-8287

Publisher:: American Society for MicrobiologyCopyright Statement

Country of Publication:: United States

Language:: English

References (11)

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Serratia marcescens No authors listed New England Journal of Medicine, Vol. 301, Issue 7, p. 388-388 https://doi.org/10.1056/nejm197908163010722	journal	August 1979
Serratia marcescens harbouring SME-type class A carbapenemases in Canada and the presence of blaSME on a novel genomic island, SmarGI1-1 Mataseje, L. F.; Boyd, D. A.; Delport, J. Journal of Antimicrobial Chemotherapy, Vol. 69, Issue 7 https://doi.org/10.1093/jac/dku040	journal	March 2014
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Velvet: Algorithms for de novo short read assembly using de Bruijn graphs Zerbino, D. R.; Birney, E. Genome Research, Vol. 18, Issue 5 https://doi.org/10.1101/gr.074492.107	journal	February 2008
ALLPATHS: De novo assembly of whole-genome shotgun microreads Butler, J.; MacCallum, I.; Kleber, M. Genome Research, Vol. 18, Issue 5 https://doi.org/10.1101/gr.7337908	journal	February 2008
Base-Calling of Automated Sequencer Traces Using Phred. I. Accuracy Assessment Ewing, Brent; Hillier, LaDeana; Wendl, Michael C. Genome Research, Vol. 8, Issue 3 https://doi.org/10.1101/gr.8.3.175	journal	March 1998
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Влияние мутаций по внеклеточной нуклеазе на свойства пигментообразующего и беспигментного штаммов Serratia marcescens Низамутдинова, Э. Х.; Ширшикова, Т. В.; Марданова, А. М. Микробиология, Vol. 85, Issue 1 https://doi.org/10.7868/s0026365616010067	journal	January 2016

Cited By (1)

Mixta gen. nov., a new genus in the Erwiniaceae Palmer, Marike; Steenkamp, Emma T.; Coetzee, Martin P. A. International Journal of Systematic and Evolutionary Microbiology, Vol. 68, Issue 4 https://doi.org/10.1099/ijsem.0.002540	journal	April 2018

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