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Complete Genome Assembly of Escherichia coli ATCC 25922, a Serotype O6 Reference Strain

Journal Article · · Genome Announcements
 [1];  [2];  [2];  [3];  [4];  [5];  [2];  [2];  [5];  [5];  [3];  [4];  [5];  [3];  [4];  [2];  [2]
  1. U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Diagnostic Systems Division (DSD); DOE/OSTI
  2. Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
  3. Naval Medical Research Center (NMRC)-Frederick, Fort Detrick, MD (United States); Henry M. Jackson Foundation, Bethesda, MD (United States)
  4. U.S. Army Edgewood Chemical Biological Center (ECBC), Aberdeen Proving Ground, MD (United States)
  5. U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Diagnostic Systems Division (DSD)
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We present the complete genome assembly of Escherichia coli ATCC 25922 as submitted to NCBI under accession no. CP009072. This strain was originally isolated from a clinical sample in Seattle, Washington (1946), and is often used in quality control testing. The assembled genome is 5.20 Mb (50.4% GC content) and includes two plasmids.

Research Organization:
Los Alamos National Laboratory (LANL), Los Alamos, NM (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division; Defense Threat Reduction Agency (DTRA), Joint Science and Technology Office
OSTI ID:
1629267
Journal Information:
Genome Announcements, Journal Name: Genome Announcements Journal Issue: 5 Vol. 2; ISSN 2169-8287
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English

References (8)

Genome sequencing in microfabricated high-density picolitre reactors journal July 2005
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs journal February 2008
ALLPATHS: De novo assembly of whole-genome shotgun microreads journal February 2008
Base-Calling of Automated Sequencer Traces Using Phred.  I. Accuracy Assessment journal March 1998
Base-Calling of Automated Sequencer Traces Using Phred. II. Error Probabilities journal March 1998
Consed: A Graphical Tool for Sequence Finishing journal March 1998
Adaptive Evolution of Escherichia coli to an α-Peptide/β-Peptoid Peptidomimetic Induces Stable Resistance journal September 2013
Solexa Ltd journal June 2004

Cited By (4)

The Escherichia coli multiple antibiotic resistance activator protein represses transcription of the lac operon journal March 2019
Isolation and Characterization of NDM-Positive Escherichia coli from Municipal Wastewater in Jeddah, Saudi Arabia journal September 2016
Serine-Aspartate Repeat Protein D Increases Staphylococcus aureus Virulence and Survival in Blood journal January 2017
Genetic Analysis and Detection of fliCH1 and fliCH12 Genes Coding for Serologically Closely Related Flagellar Antigens in Human and Animal Pathogenic Escherichia coli journal February 2016

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Related Subjects

59 BASIC BIOLOGICAL SCIENCES