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Complete Genome Assembly of Streptococcus pyogenes ATCC 19615, a Group A  -Hemolytic Reference Strain

Journal Article · · Genome Announcements
 [1];  [2];  [2];  [3];  [4];  [5];  [2];  [2];  [5];  [5];  [3];  [4];  [5];  [5];  [4];  [2];  [2]
  1. U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Diagnostic Systems Division (DSD); DOE/OSTI
  2. Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
  3. Naval Medical Research Center (NMRC)-Frederick, Fort Detrick, MD (United States); Henry M. Jackson Foundation, Bethesda, MD (United States)
  4. U.S. Army Edgewood Chemical Biological Center (ECBC), Aberdeen Proving Ground, Aberdeen, MD (United States)
  5. U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Diagnostic Systems Division (DSD)

We present the complete genome assembly of Streptococcus pyogenes ATCC 19615 (Rosenbach) as submitted to GenBank under accession number CP008926. This group A nonmotile -hemolytic clinical isolate is used for quality control in a variety of commercially available tests. The assembled genome is 1.84 Mb (38.5% GC content) and contains 1,788 coding regions.

Research Organization:
Los Alamos National Laboratory (LANL), Los Alamos, NM (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division; Defense Threat Reduction Agency (DTRA), Joint Science and Technology Office
OSTI ID:
1629265
Journal Information:
Genome Announcements, Journal Name: Genome Announcements Journal Issue: 5 Vol. 2; ISSN 2169-8287
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English

References (9)

Genome sequencing in microfabricated high-density picolitre reactors journal July 2005
Executive Summary: Clinical Practice Guideline for the Diagnosis and Management of Group A Streptococcal Pharyngitis: 2012 Update by the Infectious Diseases Society of America journal September 2012
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs journal February 2008
ALLPATHS: De novo assembly of whole-genome shotgun microreads journal February 2008
Base-Calling of Automated Sequencer Traces Using Phred.  I. Accuracy Assessment journal March 1998
Base-Calling of Automated Sequencer Traces Using Phred. II. Error Probabilities journal March 1998
Consed: A Graphical Tool for Sequence Finishing journal March 1998
Solexa Ltd journal June 2004
Invasive infections due to Streptococcus pyogenes: seasonal variation of severity and clinical characteristics, Iceland, 1975 to 2012 journal May 2014

Cited By (1)

Human TRAV1-2-negative MR1-restricted T cells detect S. pyogenes and alternatives to MAIT riboflavin-based antigens journal August 2016

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