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Complete Genome Assembly of Corynebacterium sp. Strain ATCC 6931

Journal Article · · Genome Announcements
 [1];  [2];  [3];  [4];  [2];  [2];  [5];  [6];  [5];  [2];  [7];  [2];  [2];  [2];  [7];  [6];  [2]
  1. Los Alamos National Lab. (LANL), Los Alamos, NM (United States); DOE/OSTI
  2. Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
  3. U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Diagnostic Systems Division (DSD)
  4. Henry M. Jackson Foundation, Bethesda, MD (United States); U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Center for Genome Sciences (CGS)
  5. U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Diagnostic Systems Division (DSD)
  6. Henry M. Jackson Foundation, Bethesda, MD (United States); U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Center for Genome Sciences (CGS)
  7. U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, MD (United States). Center for Genome Sciences (CGS)
+ Show Author Affiliations

The genus Corynebacterium is best known for the pathogen C. diphtheriae; however, it contains mostly commensal and nonpathogenic, as well as several opportunistic, pathogens. Here, we present the 2.47-Mb scaffolded assembly of the type strain, Corynebacterium sp. ATCC 6931 (NCTC 1914), as deposited into GenBank under accession number CP008913.

Research Organization:
Los Alamos National Laboratory (LANL), Los Alamos, NM (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division; Defense Threat Reduction Agency (DTRA), Joint Science and Technology Office
OSTI ID:
1629261
Journal Information:
Genome Announcements, Journal Name: Genome Announcements Journal Issue: 5 Vol. 2; ISSN 2169-8287
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English

References (11)

Genome sequencing in microfabricated high-density picolitre reactors journal July 2005
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs journal September 1997
The Subsystems Approach to Genome Annotation and its Use in the Project to Annotate 1000 Genomes journal September 2005
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs journal February 2008
ALLPATHS: De novo assembly of whole-genome shotgun microreads journal February 2008
Base-Calling of Automated Sequencer Traces Using Phred.  I. Accuracy Assessment journal March 1998
Base-Calling of Automated Sequencer Traces Using Phred. II. Error Probabilities journal March 1998
Consed: A Graphical Tool for Sequence Finishing journal March 1998
Microbiological and clinical features of Corynebacterium urealyticum: urinary tract stones and genomics as the Rosetta Stone journal July 2008
The Genus Corynebacterium and Other Medically Relevant Coryneform-Like Bacteria journal July 2012
Solexa Ltd journal June 2004

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