Leucine-rich-repeat-containing variable lymphocyte receptors as modules to target plant-expressed proteins

Velásquez, André C.; Nomura, Kinya; Cooper, Max D.; Herrin, Brantley R.; He, Sheng Yang

doi:10.1186/s13007-017-0180-8

Leucine-rich-repeat-containing variable lymphocyte receptors as modules to target plant-expressed proteins

Journal Article · Wed Apr 19 00:00:00 EDT 2017 · Plant Methods

DOI:https://doi.org/10.1186/s13007-017-0180-8· OSTI ID:1618905

Velásquez, André C.; Nomura, Kinya; Cooper, Max D.; Herrin, Brantley R.; He, Sheng Yang

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Research Organization:: Michigan State Univ., East Lansing, MI (United States)

Sponsoring Organization:: USDOE; USDOE Office of Science (SC), Basic Energy Sciences (BES) (SC-22)

Grant/Contract Number:: FG02-91ER20021

OSTI ID:: 1618905

Alternate ID(s):: OSTI ID: 1368384

Journal Information:: Plant Methods, Journal Name: Plant Methods Journal Issue: 1 Vol. 13; ISSN 1746-4811

Publisher:: Springer Science + Business MediaCopyright Statement

Country of Publication:: United Kingdom

Language:: English

References (59)

Properties, production, and applications of camelid single-domain antibody fragments Harmsen, M. M.; De Haard, H. J. Applied Microbiology and Biotechnology, Vol. 77, Issue 1 https://doi.org/10.1007/s00253-007-1142-2	journal	August 2007
PIRL1 and PIRL9, encoding members of a novel plant-specific family of leucine-rich repeat proteins, are essential for differentiation of microspores into pollen Forsthoefel, Nancy R.; Dao, Thuy P.; Vernon, Daniel M. Planta, Vol. 232, Issue 5 https://doi.org/10.1007/s00425-010-1242-6	journal	August 2010
High-level expression of Camelid nanobodies in Nicotiana benthamiana Teh, Yi-Hui Audrey; Kavanagh, Tony A. Transgenic Research, Vol. 19, Issue 4 https://doi.org/10.1007/s11248-009-9338-0	journal	October 2009
Tail-Anchored Proteins in Plants Pedrazzini, Emanuela Journal of Plant Biology, Vol. 52, Issue 2 https://doi.org/10.1007/s12374-009-9014-1	journal	March 2009
The leucine-rich repeat as a protein recognition motif Kobe, B. Current Opinion in Structural Biology, Vol. 11, Issue 6 https://doi.org/10.1016/S0959-440X(01)00266-4	journal	December 2001
How to build a pathogen detector: structural basis of NB-LRR function Takken, Frank LW; Goverse, Aska Current Opinion in Plant Biology, Vol. 15, Issue 4 https://doi.org/10.1016/j.pbi.2012.05.001	journal	August 2012
Variable Lymphocyte Receptor Recognition of the Immunodominant Glycoprotein of Bacillus anthracis Spores Kirchdoerfer, Robert N.; Herrin, Brantley R.; Han, Byung Woo Structure, Vol. 20, Issue 3 https://doi.org/10.1016/j.str.2012.01.009	journal	March 2012
Intracellular expression of TMV-specific single-chain Fv fragments leads to improved virus resistance in shape Nicotiana tabacum Zimmermann, Sabine; Schillberg, Stefan; Liao, Yu-Cai Molecular Breeding, Vol. 4, Issue 4, p. 369-379 https://doi.org/10.1023/A:1009638600492	journal	January 1998
Transgenic plants expressing a functional single-chain Fv antibody are specifically protected from virus attack Tavladoraki, Paraskevi; Benvenuto, Eugenio; Trinca, Stefania Nature, Vol. 366, Issue 6454 https://doi.org/10.1038/366469a0	journal	December 1993
A structural basis of the interactions between leucine-rich repeats and protein ligands Kobe, Bostjan; Deisenhofer, Johann Nature, Vol. 374, Issue 6518 https://doi.org/10.1038/374183a0	journal	March 1995
Somatic diversification of variable lymphocyte receptors in the agnathan sea lamprey Pancer, Zeev; Amemiya, Chris T.; Ehrhardt, Götz R. A. Nature, Vol. 430, Issue 6996 https://doi.org/10.1038/nature02740	journal	July 2004
Mechanism of auxin perception by the TIR1 ubiquitin ligase Tan, Xu; Calderon-Villalobos, Luz Irina A.; Sharon, Michal Nature, Vol. 446, Issue 7136 https://doi.org/10.1038/nature05731	journal	April 2007
Dual nature of the adaptive immune system in lampreys Guo, Peng; Hirano, Masayuki; Herrin, Brantley R. Nature, Vol. 459, Issue 7248 https://doi.org/10.1038/nature08068	journal	May 2009
Jasmonate perception by inositol-phosphate-potentiated COI1–JAZ co-receptor Sheard, Laura B.; Tan, Xu; Mao, Haibin Nature, Vol. 468, Issue 7322 https://doi.org/10.1038/nature09430	journal	October 2010
Structural insight into brassinosteroid perception by BRI1 She, Ji; Han, Zhifu; Kim, Tae-Wuk Nature, Vol. 474, Issue 7352 https://doi.org/10.1038/nature10178	journal	June 2011
Evolutionary implications of a third lymphocyte lineage in lampreys Hirano, Masayuki; Guo, Peng; McCurley, Nathanael Nature, Vol. 501, Issue 7467 https://doi.org/10.1038/nature12467	journal	August 2013
Redox State of Single Chain Fv Fragments Targeted to the Endoplasmic Reticulum, Cytosol and Mitochondria Biocca, Silvia; Ruberti, Francesca; Tafani, Marco Bio/Technology, Vol. 13, Issue 10 https://doi.org/10.1038/nbt1095-1110	journal	October 1995
Immunomodulation of enzyme function in plants by single-domain antibody fragments Jobling, Stephen A.; Jarman, Carl; Teh, Min-Min Nature Biotechnology, Vol. 21, Issue 1 https://doi.org/10.1038/nbt772	journal	December 2002
Fusion proteins comprising a Fusarium-specific antibody linked to antifungal peptides protect plants against a fungal pathogen Peschen, Dieter; Li, He-Ping; Fischer, Rainer Nature Biotechnology, Vol. 22, Issue 6 https://doi.org/10.1038/nbt970	journal	May 2004
Single-chain antibodies against a plant viral RNA-dependent RNA polymerase confer virus resistance Boonrod, KaJohn; Galetzka, Danuta; Nagy, Peter D. Nature Biotechnology, Vol. 22, Issue 7 https://doi.org/10.1038/nbt983	journal	June 2004
Antibody responses of variable lymphocyte receptors in the lamprey Alder, Matthew N.; Herrin, Brantley R.; Sadlonova, Andrea Nature Immunology, Vol. 9, Issue 3 https://doi.org/10.1038/ni1562	journal	February 2008
V-ATPase activity in the TGN/EE is required for exocytosis and recycling in Arabidopsis Luo, Yu; Scholl, Stefan; Doering, Anett Nature Plants, Vol. 1, Issue 7 https://doi.org/10.1038/nplants.2015.94	journal	July 2015
Isolating and engineering human antibodies using yeast surface display Chao, Ginger; Lau, Wai L.; Hackel, Benjamin J. Nature Protocols, Vol. 1, Issue 2 https://doi.org/10.1038/nprot.2006.94	journal	July 2006
Structure of a lamprey variable lymphocyte receptor in complex with a protein antigen Velikovsky, C. Alejandro; Deng, Lu; Tasumi, Satoshi Nature Structural & Molecular Biology, Vol. 16, Issue 7 https://doi.org/10.1038/nsmb.1619	journal	June 2009
Expression of a single-chain Fv antibody against abscisic acid creates a wilty phenotype in transgenic tobacco Artsaenko, Olga; Peisker, Martin; Nieden, Uta The Plant Journal, Vol. 8, Issue 5 https://doi.org/10.1046/j.1365-313X.1995.08050745.x	journal	November 1995
Structure and specificity of lamprey monoclonal antibodies Herrin, B. R.; Alder, M. N.; Roux, K. H. Proceedings of the National Academy of Sciences, Vol. 105, Issue 6 https://doi.org/10.1073/pnas.0711619105	journal	January 2008
High-affinity lamprey VLRA and VLRB monoclonal antibodies Tasumi, S.; Velikovsky, C. A.; Xu, G. Proceedings of the National Academy of Sciences, Vol. 106, Issue 31 https://doi.org/10.1073/pnas.0904443106	journal	July 2009
A domain swap approach reveals a role of the plant wall-associated kinase 1 (WAK1) as a receptor of oligogalacturonides Brutus, A.; Sicilia, F.; Macone, A. Proceedings of the National Academy of Sciences, Vol. 107, Issue 20 https://doi.org/10.1073/pnas.1000675107	journal	May 2010
Identification of a third variable lymphocyte receptor in the lamprey Kasamatsu, J.; Sutoh, Y.; Fugo, K. Proceedings of the National Academy of Sciences, Vol. 107, Issue 32 https://doi.org/10.1073/pnas.1001910107	journal	July 2010
Tomato Cf resistance proteins mediate recognition of cognate homologous effectors from fungi pathogenic on dicots and monocots Stergiopoulos, I.; van den Burg, H. A.; Okmen, B. Proceedings of the National Academy of Sciences, Vol. 107, Issue 16 https://doi.org/10.1073/pnas.1002910107	journal	April 2010
Effector-triggered immunity blocks pathogen degradation of an immunity-associated vesicle traffic regulator in Arabidopsis Nomura, K.; Mecey, C.; Lee, Y. -N. Proceedings of the National Academy of Sciences, Vol. 108, Issue 26 https://doi.org/10.1073/pnas.1103338108	journal	June 2011
The crystal structure of polygalacturonase-inhibiting protein (PGIP), a leucine-rich repeat protein involved in plant defense Di Matteo, A.; Federici, L.; Mattei, B. Proceedings of the National Academy of Sciences, Vol. 100, Issue 17 https://doi.org/10.1073/pnas.1733690100	journal	August 2003
Receptor-like kinases from Arabidopsis form a monophyletic gene family related to animal receptor kinases Shiu, S. -H.; Bleecker, A. B. Proceedings of the National Academy of Sciences, Vol. 98, Issue 19 https://doi.org/10.1073/pnas.181141598	journal	August 2001
The Pseudomonas syringae Hrp pathogenicity island has a tripartite mosaic structure composed of a cluster of type III secretion genes bounded by exchangeable effector and conserved effector loci that contribute to parasitic fitness and pathogenicity in plants Alfano, J. R.; Charkowski, A. O.; Deng, W. -L. Proceedings of the National Academy of Sciences, Vol. 97, Issue 9 https://doi.org/10.1073/pnas.97.9.4856	journal	April 2000
Recognition of the Thomsen-Friedenreich Pancarcinoma Carbohydrate Antigen by a Lamprey Variable Lymphocyte Receptor Luo, Ming; Velikovsky, C. Alejandro; Yang, Xinbo Journal of Biological Chemistry, Vol. 288, Issue 32 https://doi.org/10.1074/jbc.M113.480467	journal	June 2013
SDS-resistant Active and Thermostable Dimers Are Obtained from the Dissociation of Homotetrameric β-Glycosidase from Hyperthermophilic Sulfolobus solfataricus in SDS : STABILIZING ROLE OF THE A-C INTERMONOMERIC INTERFACE Gentile, Fabrizio; Amodeo, Pietro; Febbraio, Ferdinando Journal of Biological Chemistry, Vol. 277, Issue 46 https://doi.org/10.1074/jbc.M206761200	journal	September 2002
Protein Disulfide Bond Formation in the Cytoplasm during Oxidative Stress Cumming, Robert C.; Andon, Nancy L.; Haynes, Paul A. Journal of Biological Chemistry, Vol. 279, Issue 21 https://doi.org/10.1074/jbc.M312267200	journal	March 2004
Interactions between Syntaxins Identify at Least Five SNARE Complexes within the Golgi/Prevacuolar System of the Arabidopsis Cell Sanderfoot, Anton A.; Kovaleva, Valya; Bassham, Diane C. Molecular Biology of the Cell, Vol. 12, Issue 12 https://doi.org/10.1091/mbc.12.12.3733	journal	December 2001
Live imaging of intra- and extracellular pH in plants using pHusion, a novel genetically encoded biosensor Gjetting, Sisse Krag; Ytting, Cecilie Karkov; Schulz, Alexander Journal of Experimental Botany, Vol. 63, Issue 8 https://doi.org/10.1093/jxb/ers040	journal	March 2012
A simple and rapid method for the preparation of plant genomic DNA for PCR analysis Edwards, K.; Johnstone, C.; Thompson, C. Nucleic Acids Research, Vol. 19, Issue 6 https://doi.org/10.1093/nar/19.6.1349	journal	January 1991
SMART: recent updates, new developments and status in 2015 Letunic, Ivica; Doerks, Tobias; Bork, Peer Nucleic Acids Research, Vol. 43, Issue D1 https://doi.org/10.1093/nar/gku949	journal	October 2014
The chimeric leucine-rich repeat/extensin cell wall protein LRX1 is required for root hair morphogenesis in Arabidopsis thaliana Baumberger, N. Genes & Development, Vol. 15, Issue 9 https://doi.org/10.1101/gad.200201	journal	May 2001
In-Depth Proteome Analysis of Arabidopsis Leaf Peroxisomes Combined with in Vivo Subcellular Targeting Verification Indicates Novel Metabolic and Regulatory Functions of Peroxisomes Reumann, Sigrun; Quan, Sheng; Aung, Kyaw Plant Physiology, Vol. 150, Issue 1 https://doi.org/10.1104/pp.109.137703	journal	March 2009
Genome-Wide Analysis of NBS-LRR–Encoding Genes in Arabidopsis Meyers, Blake C.; Kozik, Alexander; Griego, Alyssa The Plant Cell, Vol. 15, Issue 4 https://doi.org/10.1105/tpc.009308	journal	March 2003
The Arabidopsis CLAVATA2 Gene Encodes a Receptor-like Protein Required for the Stability of the CLAVATA1 Receptor-like Kinase Jeong, Sangho; Trotochaud, Amy E.; Clark, Steven E. The Plant Cell, Vol. 11, Issue 10 https://doi.org/10.1105/tpc.11.10.1925	journal	October 1999
GAP Activity, but Not Subcellular Targeting, Is Required for Arabidopsis RanGAP Cellular and Developmental Functions Boruc, Joanna; Griffis, Anna H. N.; Rodrigo-Peiris, Thushani The Plant Cell, Vol. 27, Issue 7 https://doi.org/10.1105/tpc.114.135780	journal	June 2015
AGD5 is a GTPase-activating protein at the trans-Golgi network: AGD5’s role at the TGN in vivo Stefano, Giovanni; Renna, Luciana; Rossi, Marika The Plant Journal, Vol. 64, Issue 5 https://doi.org/10.1111/j.1365-313X.2010.04369.x	journal	November 2010
Diversity and Function of Adaptive Immune Receptors in a Jawless Vertebrate Alder, M. N. Science, Vol. 310, Issue 5756 https://doi.org/10.1126/science.1119420	journal	December 2005
A Bacterial Virulence Protein Suppresses Host Innate Immunity to Cause Plant Disease Nomura, K. Science, Vol. 313, Issue 5784 https://doi.org/10.1126/science.1129523	journal	July 2006
Antigen Recognition by Variable Lymphocyte Receptors Han, B. W.; Herrin, B. R.; Cooper, M. D. Science, Vol. 321, Issue 5897 https://doi.org/10.1126/science.1162484	journal	September 2008
Structural Basis of TLR5-Flagellin Recognition and Signaling Yoon, S. -i.; Kurnasov, O.; Natarajan, V. Science, Vol. 335, Issue 6070 https://doi.org/10.1126/science.1215584	journal	February 2012
Structural Basis for flg22-Induced Activation of the Arabidopsis FLS2-BAK1 Immune Complex Sun, Y.; Li, L.; Macho, A. P. Science, Vol. 342, Issue 6158 https://doi.org/10.1126/science.1243825	journal	October 2013
Directed Evolution of Brain-Derived Neurotrophic Factor for Improved Folding and Expression in Saccharomyces cerevisiae Burns, Michael L.; Malott, Thomas M.; Metcalf, Kevin J. Applied and Environmental Microbiology, Vol. 80, Issue 18 https://doi.org/10.1128/AEM.01466-14	journal	July 2014
VLR-Based Adaptive Immunity Boehm, Thomas; McCurley, Nathanael; Sutoh, Yoichi Annual Review of Immunology, Vol. 30, Issue 1 https://doi.org/10.1146/annurev-immunol-020711-075038	journal	April 2012
Oxidative Protein-Folding Systems in Plant Cells Onda, Yayoi International Journal of Cell Biology, Vol. 2013 https://doi.org/10.1155/2013/585431	journal	January 2013
Expression of a Functional Single-chain Antibody against GA _24/19 in Transgenic Tobacco Shimada, Naoki; Suzuki, Yoshihito; Nakajima, Masatoshi Bioscience, Biotechnology, and Biochemistry, Vol. 63, Issue 4 https://doi.org/10.1271/bbb.63.779	journal	January 1999
Improved Gateway Binary Vectors: High-Performance Vectors for Creation of Fusion Constructs in Transgenic Analysis of Plants Nakagawa, Tsuyoshi; Suzuki, Takamasa; Murata, Satoko Bioscience, Biotechnology, and Biochemistry, Vol. 71, Issue 8 https://doi.org/10.1271/bbb.70216	journal	August 2007
Dynamic Evolution of Pathogenicity Revealed by Sequencing and Comparative Genomics of 19 Pseudomonas syringae Isolates Baltrus, David A.; Nishimura, Marc T.; Romanchuk, Artur PLoS Pathogens, Vol. 7, Issue 7 https://doi.org/10.1371/journal.ppat.1002132	journal	July 2011
PVY-Resistant Transgenic Potato Plants Expressing an Anti-NIa Protein scFv Antibody Gargouri-Bouzid, Radhia; Jaoua, Leïla; Rouis, Souad Molecular Biotechnology, Vol. 33, Issue 2 https://doi.org/10.1385/MB:33:2:133	journal	January 2006

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Leucine-rich repeat
Modules HopM1
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Leucine-rich-repeat-containing variable lymphocyte receptors as modules to target plant-expressed proteins

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References (59)

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