Complete Genome Sequence of Terriglobus albidus Strain ORNL, an Acidobacterium Isolated from the Populus deltoides Rhizosphere

Podar, Mircea; Turner, Joel; Burdick, Leah H.; Pelletier, Dale

doi:10.1128/MRA.01065-19

Complete Genome Sequence of Terriglobus albidus Strain ORNL, an Acidobacterium Isolated from the Populus deltoides Rhizosphere

Journal Article · Wed Nov 13 23:00:00 EST 2019 · Microbiology Resource Announcements

DOI:https://doi.org/10.1128/MRA.01065-19· OSTI ID:1606969

^[1]; Turner, Joel ^[1]; Burdick, Leah H. ^[1]; ^[1]

Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)

Terriglobus albidus strain ORNL is a heterotrophic soil acidobacterium isolated from the rhizosphere of an Eastern cottonwood tree (Populus deltoides) in Tennessee. Its 6.4-Mb chromosome was completely sequenced using PacBio long reads, and it encodes 5,010 proteins and 53 RNAs.

Research Organization:: Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER) (SC-23)

Grant/Contract Number:: AC05-00OR22725

OSTI ID:: 1606969

Journal Information:: Microbiology Resource Announcements, Journal Name: Microbiology Resource Announcements Journal Issue: 46 Vol. 8; ISSN 2576-098X

Publisher:: SSPA - American Society for MicrobiologyCopyright Statement

Country of Publication:: United States

Language:: English

References (12)

IND-enzymes: a repository for hydrolytic enzymes derived from thermophilic and psychrophilic bacterial species with potential industrial usage Sunny, Jithin S.; Nisha, Khairun; Natarajan, Anuradha Extremophiles, Vol. 25, Issue 4 https://doi.org/10.1007/s00792-021-01231-2	journal	May 2021
KBase: The United States Department of Energy Systems Biology Knowledgebase Arkin, Adam P.; Cottingham, Robert W.; Henry, Christopher S. Nature Biotechnology, Vol. 36, Issue 7 https://doi.org/10.1038/nbt.4163	journal	July 2018
A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life Parks, Donovan H.; Chuvochina, Maria; Waite, David W. Nature Biotechnology, Vol. 36, Issue 10 https://doi.org/10.1038/nbt.4229	journal	August 2018
Evolutionary stasis of a deep subsurface microbial lineage Becraft, Eric D.; Lau Vetter, Maggie C. Y.; Bezuidt, Oliver K. I. The ISME Journal https://doi.org/10.1038/s41396-021-00965-3	journal	April 2021
Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data Kearse, M.; Moir, R.; Wilson, A. Bioinformatics, Vol. 28, Issue 12 https://doi.org/10.1093/bioinformatics/bts199	journal	April 2012
NCBI prokaryotic genome annotation pipeline Tatusova, Tatiana; DiCuccio, Michael; Badretdin, Azat Nucleic Acids Research, Vol. 44, Issue 14 https://doi.org/10.1093/nar/gkw569	journal	June 2016
Terriglobus albidus sp. nov., a member of the family Acidobacteriaceae isolated from Namibian semiarid savannah soil Huber, Katharina J.; Overmann, Jörg; Pascual, Javier International Journal of Systematic and Evolutionary Microbiology, Vol. 65, Issue 10 https://doi.org/10.1099/ijsem.0.000411	journal	October 2015
Enrichment of Root Endophytic Bacteria from Populus deltoides and Single-Cell-Genomics Analysis Utturkar, Sagar M.; Cude, W. Nathan; Robeson, Michael S. Applied and Environmental Microbiology, Vol. 82, Issue 18 https://doi.org/10.1128/AEM.01285-16	journal	July 2016
Identifying the Dominant Soil Bacterial Taxa in Libraries of 16S rRNA and 16S rRNA Genes Janssen, P. H. Applied and Environmental Microbiology, Vol. 72, Issue 3 https://doi.org/10.1128/AEM.72.3.1719-1728.2006	journal	March 2006
Fine-scale population structure and evidence for local adaptation in Australian giant black tiger shrimp (Penaeus monodon) using SNP analysis Vu, Nga T. T.; Zenger, Kyall R.; Guppy, Jarrod L. BMC Genomics, Vol. 21, Issue 1 https://doi.org/10.1186/s12864-020-07084-x	journal	September 2020
Complete Genome Sequence of Terriglobus albidus Strain ORNL, an Acidobacterium Isolated from the Populus deltoides Rhizosphere Podar, Mircea; Crockett, Zachary Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States); U.S. Department of Energy Systems Biology Knowledgebase https://doi.org/10.25982/44746.21/1635640	dataset	January 2020
The Ecology of Acidobacteria: Moving beyond Genes and Genomes Kielak, Anna M.; Barreto, Cristine C.; Kowalchuk, George A. Frontiers in Microbiology, Vol. 7 https://doi.org/10.3389/fmicb.2016.00744	journal	May 2016

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Complete Genome Sequence of Terriglobus albidus Strain ORNL, an Acidobacterium Isolated from the Populus deltoides Rhizosphere Podar, Mircea; Crockett, Zachary Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States); U.S. Department of Energy Systems Biology Knowledgebase https://doi.org/10.25982/44746.21/1635640	dataset	January 2020

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