Recent functional insights into the role of (p)ppGpp in bacterial physiology
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journal
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April 2015 |
Posttranscriptional Control of Quorum-Sensing-Dependent Virulence Genes by DksA in Pseudomonas aeruginosa
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June 2003 |
DksA potentiates direct activation of amino acid promoters by ppGpp
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May 2005 |
The Seattle Structural Genomics Center for Infectious Disease (SSGCID)
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October 2009 |
Direct interactions between the coiled-coil tip of DksA and the trigger loop of RNA polymerase mediate transcriptional regulation
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December 2012 |
Developmental stage-specific metabolic and transcriptional activity of Chlamydia trachomatis in an axenic medium
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November 2012 |
Role of the (p)ppGpp Synthase RSH, a RelA/SpoT Homolog, in Stringent Response and Virulence of Staphylococcus aureus
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journal
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May 2010 |
Translational gene expression control in Chlamydia trachomatis
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journal
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January 2022 |
The Influence of Certain Salts, Amino Acids, Sugars, and Proteins on the Stability of Rickettsiae
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journal
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April 1950 |
phenix.mr_rosetta: molecular replacement and model rebuilding with Phenix and Rosetta
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March 2012 |
The 4-cysteine zinc-finger motif of the RNA polymerase regulator DksA serves as a thiol switch for sensing oxidative and nitrosative stress: DksA thiol switch
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January 2014 |
On the relationship between sequence and structure similarities in proteomics
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January 2007 |
Redox-Active Sensing by Bacterial DksA Transcription Factors Is Determined by Cysteine and Zinc Content
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May 2016 |
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
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January 1994 |
Effects on Growth by Changes of the Balance between GreA, GreB, and DksA Suggest Mutual Competition and Functional Redundancy in Escherichia coli
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January 2012 |
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants the Keio collection
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February 2006 |
MolProbity: More and better reference data for improved all-atom structure validation: PROTEIN SCIENCE.ORG
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November 2017 |
The Stringent Response and Cell Cycle Arrest in Escherichia coli
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December 2008 |
Allosteric Effector ppGpp Potentiates the Inhibition of Transcript Initiation by DksA
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March 2018 |
Adenosine Triphosphate and Other Requirements for the Utilization of Glucose by Agents of the Psittacosis-Trachoma Group
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July 1965 |
Following the Footsteps of Chlamydial Gene Regulation
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September 2015 |
DksA Affects ppGpp Induction of RpoS at a Translational Level
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August 2002 |
Purification on Renografin Density Gradients of Chlamydia trachomatis Grown in the Yolk Sac of Eggs
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journal
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January 1974 |
MEGA11: Molecular Evolutionary Genetics Analysis Version 11
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journal
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April 2021 |
NMR contributions to structural dynamics studies of intrinsically disordered proteins
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journal
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April 2014 |
Regulation through the Secondary Channel—Structural Framework for ppGpp-DksA Synergism during Transcription
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journal
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August 2004 |
Sulfur-rich proteins of Chlamydia trachomatis: developmentally regulated transcription of polycistromic mRNA from tandem promoters
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journal
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March 1990 |
DksA regulates RNA polymerase in Escherichia coli through a network of interactions in the secondary channel that includes Sequence Insertion 1
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journal
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November 2015 |
Interrogating Genes That Mediate Chlamydia trachomatis Survival in Cell Culture Using Conditional Mutants and Recombination
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journal
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May 2016 |
Two Compounds implicated in the Function of the RC Gene of Escherichia coli
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March 1969 |
Integrative genomics viewer
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journal
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January 2011 |
High-throughput protein production and purification at the Seattle Structural Genomics Center for Infectious Disease
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journal
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August 2011 |
GenBank
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journal
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November 2015 |
The global, ppGpp-mediated stringent response to amino acid starvation in Escherichia coli
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journal
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June 2008 |
Identical, Independent, and Opposing Roles of ppGpp and DksA in Escherichia coli
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journal
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July 2007 |
Floxed-Cassette Allelic Exchange Mutagenesis Enables Markerless Gene Deletion in Chlamydia trachomatis and Can Reverse Cassette-Induced Polar Effects
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journal
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December 2018 |
Role of a Zn-independent DksA in Zn homeostasis and stringent response: Role of a DksA homolog in Zn homeostasis
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journal
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December 2010 |
How Well is Enzyme Function Conserved as a Function of Pairwise Sequence Identity?
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journal
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October 2003 |
Feasibility of a Conditional Knockout System for Chlamydia Based on CRISPR Interference
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journal
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February 2018 |
Application of a time-delay neural network to promoter annotation in the Drosophila melanogaster genome
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December 2001 |
The early gene product EUO is a transcriptional repressor that selectively regulates promoters of Chlamydia late genes: EUO is a repressor of Chlamydia late genes
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May 2012 |
DksA
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journal
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August 2004 |
Impact of Active Metabolism on Chlamydia trachomatis Elementary Body Transcript Profile and Infectivity
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July 2018 |
MView: a web-compatible database search or multiple alignment viewer
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journal
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May 1998 |
The Phenix software for automated determination of macromolecular structures
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September 2011 |
ppGpp: a global regulator in Escherichia coli
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May 2005 |
The transcription fidelity factor GreA impedes DNA break repair
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October 2017 |
Features and development of Coot
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journal
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March 2010 |
The Global Burden of Trachoma: A Review
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journal
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October 2009 |
Predicting functionally important residues from sequence conservation
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journal
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May 2007 |
Three temporal classes of gene expression during the Chlamydia trachomatis developmental cycle
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journal
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August 2000 |
Stringent Response Regulators Contribute to Recovery from Glucose Phosphate Stress in Escherichia coli
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journal
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December 2017 |
Identification of Chlamydia pneumoniae Proteins in the Transition from Reticulate to Elementary Body Formation
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journal
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December 2006 |
Deep sequencing-based discovery of the Chlamydia trachomatis transcriptome
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journal
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November 2009 |
DksA2, a zinc-independent structural analog of the transcription factor DksA
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journal
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February 2013 |
IUPred2A: context-dependent prediction of protein disorder as a function of redox state and protein binding
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June 2018 |
Chlamydia trachomatis Infections: Progress and Problems
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journal
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March 1999 |
Synthetic Riboswitches That Induce Gene Expression in Diverse Bacterial Species
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October 2010 |
The Transcription Factor DksA Prevents Conflicts between DNA Replication and Transcription Machinery
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May 2010 |
The transcriptional landscape of Chlamydia pneumoniae
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January 2011 |
(p)ppGpp: Still Magical?
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October 2008 |
Quantitative Proteomics of the Infectious and Replicative Forms of Chlamydia trachomatis
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February 2016 |
Utilization of protein intrinsic disorder knowledge in structural proteomics
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journal
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February 2013 |
Genomic transcriptional profiling of the developmental cycle of Chlamydia trachomatis
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journal
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June 2003 |
Genome Sequence of an Obligate Intracellular Pathogen of Humans: Chlamydia trachomatis
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journal
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October 1998 |
CRISPR Interference To Inducibly Repress Gene Expression in Chlamydia trachomatis
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journal
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June 2021 |
DksA represses ribosomal gene transcription in Pseudomonas aeruginosa by interacting with RNA polymerase on ribosomal promoters: DksA regulates ribosomal gene transcription
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journal
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March 2005 |
Analyzing Protein Disorder with IUPred2A
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journal
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April 2020 |
Effects of DksA, GreA, and GreB on Transcription Initiation: Insights into the Mechanisms of Factors that Bind in the Secondary Channel of RNA Polymerase
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journal
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March 2007 |
Automated Structure Solution with the PHENIX Suite
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book
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January 2008 |
Expression and Targeting of Secreted Proteins from Chlamydia trachomatis
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journal
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January 2014 |
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
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journal
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December 2014 |
Distinct roles of ppGpp and DksA in Legionella pneumophila differentiation
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journal
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April 2010 |