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Title: Structural Characterization of Two CO Molecules Bound to the Nitrogenase Active Site

Journal Article · · Angewandte Chemie (International Edition)
ORCiD logo [1];  [2];  [2]; ORCiD logo [1]; ORCiD logo [2]
  1. California Institute of Technology (CalTech), Pasadena, CA (United States). Division of Chemistry and Chemical Engineering; California Institute of Technology (CalTech), Pasadena, CA (United States). Howard Hughes Medical Inst.
  2. California Institute of Technology (CalTech), Pasadena, CA (United States). Division of Chemistry and Chemical Engineering

As an approach towards unraveling the nitrogenase mechanism, we have studied the binding of CO to the activesite FeMo-cofactor. CO is not only an inhibitor of nitrogenase, but it is also a substrate, undergoing reduction to hydrocarbons (Fischer–Tropsch-type chemistry). The CC bond forming capabilities of nitrogenase suggest that multiple CO or COderived ligands bind to the active site. Herein, we report a crystal structure with two CO ligands coordinated to the FeMo-cofactor of the molybdenum nitrogenase at 1.33 resolution. In addition to the previously observed bridging CO ligand between Fe2 and Fe6 of the FeMo-cofactor, a new ligand binding mode is revealed through a second CO ligand coordinated terminally to Fe6. While the relevance of this state to nitrogenase-catalyzed reactions remains to be established, it highlights the privileged roles for Fe2 and Fe6 in ligand binding, with multiple coordination modes available depending on the ligand and reaction conditions.

Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division
Grant/Contract Number:
AC02-76SF00515
OSTI ID:
1816336
Journal Information:
Angewandte Chemie (International Edition), Vol. 60, Issue 11; ISSN 1433-7851
Publisher:
WileyCopyright Statement
Country of Publication:
United States
Language:
English

References (45)

Evaluation of the Catalytic Relevance of the CO-Bound States of V-Nitrogenase journal March 2018
Investigation of CO bound to inhibited forms of nitrogenase MoFe protein by 13C ENDOR journal August 1995
Electron Inventory, Kinetic Assignment (E n ), Structure, and Bonding of Nitrogenase Turnover Intermediates with C 2 H 2 and CO journal November 2005
Photolysis of Hi-CO Nitrogenase - Observation of a Plethora of Distinct CO Species Using Infrared Spectroscopy journal March 2011
CO Binding to the FeV Cofactor of CO‐Reducing Vanadium Nitrogenase at Atomic Resolution journal October 2020
Electron Transfer in Nitrogenase journal January 2020
Rethinking the Nitrogenase Mechanism: Activating the Active Site journal November 2019
Examining the relationship between coordination mode and reactivity of dinitrogen journal March 2017
Structural evidence for a dynamic metallocofactor during N 2 reduction by Mo-nitrogenase journal June 2020
Terminal Iron Dinitrogen and Iron Imide Complexes Supported by a Tris(phosphino)borane Ligand journal January 2011
Reactivity, Mechanism, and Assembly of the Alternative Nitrogenases journal March 2020
SFCHECK : a unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model journal January 1999
Evaluation of the Catalytic Relevance of the CO-Bound States of V-Nitrogenase journal March 2018
Iron-sulfur clusters in the molybdenum-iron protein component of nitrogenase. Electron paramagnetic resonance of the carbon monoxide inhibited state journal October 1979
How does vanadium nitrogenase reduce CO to hydrocarbons? journal January 2011
Structure−Function Relationships of Alternative Nitrogenases journal January 1996
A Thermodynamic Model for Redox-Dependent Binding of Carbon Monoxide at Site-Differentiated, High Spin Iron Clusters journal March 2018
Catalysis-dependent selenium incorporation and migration in the nitrogenase active site iron-molybdenum cofactor journal December 2015
Metal-Ion Valencies of the FeMo Cofactor in CO-Inhibited and Resting State Nitrogenase by 57 Fe Q-Band ENDOR journal November 1997
Inhibition of nitrogenase-catalyzed reductions journal January 1973
Structural Enzymology of Nitrogenase Enzymes journal June 2020
Crystallographic Analysis of the MoFe Protein of Nitrogenase from a nifV Mutant of Klebsiella pneumoniae Identifies Citrate as a Ligand to the Molybdenum of Iron Molybdenum Cofactor (FeMoco) journal July 2002
Strategies Towards Capturing Nitrogenase Substrates and Intermediates via Controlled Alteration of Electron Fluxes journal December 2018
Evidence for Interstitial Carbon in Nitrogenase FeMo Cofactor journal November 2011
A bound reaction intermediate sheds light on the mechanism of nitrogenase journal March 2018
Nitrogenase reduction of carbon-containing compounds journal August 2013
Ligand binding to the FeMo-cofactor: Structures of CO-bound and reactivated nitrogenase journal September 2014
Extending the Carbon Chain: Hydrocarbon Formation Catalyzed by Vanadium/Molybdenum Nitrogenases journal August 2011
Mechanism of Molybdenum Nitrogenase journal January 1996
Triggering N2 uptake via redox-induced expulsion of coordinated NH3 and N2 silylation at trigonal bipyramidal iron journal May 2010
Reduction and Condensation of Aldehydes by the Isolated Cofactor of Nitrogenase journal October 2018
CO Coupling Chemistry of a Terminal Mo Carbide: Sequential Addition of Proton, Hydride, and CO Releases Ethenone journal September 2019
CO Binding to the FeMo Cofactor of CO-Inhibited Nitrogenase:  13 CO and 1 H Q-Band ENDOR Investigation journal October 1997
Remarks about protein structure precision journal March 1999
Terminal Iron Dinitrogen and Iron Imide Complexes Supported by a Tris(phosphino)borane Ligand journal January 2011
Interactions among substrates and inhibitors of nitrogenase. journal January 1975
IR-Monitored Photolysis of CO-Inhibited Nitrogenase: A Major EPR-Silent Species with Coupled Terminal CO Ligands journal November 2012
The structure of vanadium nitrogenase reveals an unusual bridging ligand journal July 2017
Molybdenum Nitrogenase Catalyzes the Reduction and Coupling of CO to Form Hydrocarbons journal March 2011
Substrate reduction properties of dinitrogenase activated in vitro are dependent upon the presence of homocitrate or its analogs during iron-molybdenum cofactor synthesis journal September 1989
Fe-N2/CO complexes that model a possible role for the interstitial C atom of FeMo-cofactor (FeMoco) journal September 2013
Identification of the CO-Binding Cluster in Nitrogenase MoFe Protein by ENDOR of 57 Fe Isotopomers journal January 1996
Catalytic Reduction of N 2 to NH 3 by an Fe–N 2 Complex Featuring a C-Atom Anchor journal January 2014
Reduction of Substrates by Nitrogenases journal March 2020
Nitrogenase FeMoco investigated by spatially resolved anomalous dispersion refinement journal March 2016