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Title: Meeting report: GSC M5 roundtable at the 13th International Society for Microbial Ecology meeting in Seattle, WA, USA August 22-27, 2010

Journal Article · · Standards in Genomic Sciences
DOI:https://doi.org/10.4056/sigs.1333437· OSTI ID:1629409
 [1];  [2];  [3];  [4];  [5];  [6];  [7]
  1. Argonne National Lab. (ANL), Argonne, IL (United States); Univ. of Chicago, Chicago, IL (United States). Dept. of Ecology and Evolution
  2. Argonne National Lab. (ANL), Argonne, IL (United States); Univ. of Chicago, Chicago, IL (United States). Computation Inst.
  3. Univ. of Colorado, Boulder, CO (United States). Dept. of Chemistry and Biochemistry
  4. NERC Centre for Ecology & Hydrology, Wallingford, Oxford (United Kingdom)
  5. USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
  6. Max Planck Inst. for Marine Microbiology, Bremen (Germany). Microbial Genomics Group
  7. Univ. of California San Diego, La Jolla, CA (United States)
+ Show Author Affiliations

This report summarizes the proceedings of the Metagenomics, Metadata, Metaanalysis, Models and Metainfrastructure (M5) Roundtable at the 13th International Society for Microbial Ecology Meeting in Seattle, WA, USA August 22-27, 2010. The Genomic Standards Consortium (GSC) hosted this meeting as a community engagement exercise to describe the GSC to the microbial ecology community during this important international meeting. The roundtable included five talks given by members of the GSC, and was followed by audience participation in the form of a roundtable discussion. This report summarizes this event. Further information on the GSC and its range of activities can be found at http://www.gensc.org.

Research Organization:
Argonne National Laboratory (ANL), Argonne, IL (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division; National Science Foundation (NSF)
OSTI ID:
1629409
Journal Information:
Standards in Genomic Sciences, Vol. 3, Issue 3; Conference: 13.International Society for Microbial Ecology Meeting (ISME13), Seattle, WA (United States), 22-27 Aug 2010; ISSN 1944-3277
Publisher:
BioMed CentralCopyright Statement
Country of Publication:
United States
Language:
English

References (10)

The minimum information about a genome sequence (MIGS) specification journal May 2008
The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes journal September 2008
Habitat-Lite: A GSC Case Study Based on Free Text Terms for Environmental Metadata journal June 2008
A changing of the guard journal March 2009
The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata journal November 2009
The microbial pan-genome journal December 2005
Laying the Foundation for a Genomic Rosetta Stone: Creating Information Hubs through the Use of Consensus Identifiers journal June 2008
The integrated microbial genomes system: an expanding comparative analysis resource journal October 2009
A Standard MIGS/MIMS Compliant XML Schema: Toward the Development of the Genomic Contextual Data Markup Language (GCDML) journal June 2008
Community cyberinfrastructure for Advanced Microbial Ecology Research and Analysis: the CAMERA resource journal November 2010

Cited By (5)

A preliminary metagenomic study of puer tea during pile fermentation: Metagenomic study of puer tea during pile fermentation journal April 2013
A preliminary metagenomic study of puer tea during pile fermentation: A preliminary metagenomic study of puer tea during pile fermentation journal July 2013
The first special issue of Standards in Genomic Sciences from the Genomic Standards Consortium journal January 2010
Conceptualizing a Genomics Software Institute (GSI) journal March 2012
Report of the 13th Genomic Standards Consortium Meeting, Shenzhen, China, March 4–7, 2012. journal May 2012

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Related Subjects

59 BASIC BIOLOGICAL SCIENCES
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