Synechococcus sp. Strain PCC 7002 Transcriptome: Acclimation to Temperature, Salinity, Oxidative Stress, and Mixotrophic Growth Conditions

Ludwig, Marcus; Bryant, Donald A.

doi:10.3389/fmicb.2012.00354

Title: Synechococcus sp. Strain PCC 7002 Transcriptome: Acclimation to Temperature, Salinity, Oxidative Stress, and Mixotrophic Growth Conditions

Journal Article · Thu Oct 11 00:00:00 EDT 2012 · Frontiers in Microbiology

DOI:https://doi.org/10.3389/fmicb.2012.00354· OSTI ID:1628071

Ludwig, Marcus ^[1]; Bryant, Donald A. ^[1]

Pennsylvania State Univ., University Park, PA (United States). Dept. of Biochemistry and Molecular Biology

Synechococcus sp. strain PCC 7002 is a unicellular, euryhaline cyanobacterium. It is a model organism for studies of cyanobacterial metabolism and has great potential for biotechnological applications. It exhibits an exceptional tolerance of high-light irradiation and shows very rapid growth.The habitats from which this and closely related strains were isolated are subject to changes in several environmental factors, including light, nutrient supply, temperature, and salinity. In this study global transcriptome profiling via RNAseq has been used to perform a comparative and integrated study of global changes in cells grown at different temperatures, at different salinities, and under mixotrophic conditions, when a metabolizable organic carbon source was present. Furthermore, the transcriptomes were investigated for cells that were subjected to a heat shock and that were exposed to oxidative stress. Lower growth temperatures caused relatively minor changes of the transcriptome; the most prominent changes affected fatty acid desaturases. A heat shock caused severe changes of the transcriptome pattern; transcripts for genes associated with major metabolic pathways declined and those for different chaperones increased dramatically. Oxidative stress, however, left the transcript pattern almost unaffected. When grown at high salinity, Synechococcus sp. PCC 7002 had increased expression of genes involved in compatible solute biosynthesis and showed increased mRNA levels for several genes involved in electron transport. Transcripts of two adjacent genes dramatically increased upon growth at high salinity; the respective proteins are putatively involved in coping with oxidative stress and in triggering ion channels. Only minor changes were observed when cells were grown at low salinity or when the growth medium was supplemented with glycerol. However, the transcriptome data suggest that cells must acclimate to excess reducing equivalents when a reduced C-source is present.

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Research Organization:: Pennsylvania State Univ., University Park, PA (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER); US Air Force Office of Scientific Research (AFOSR)

Contributing Organization:: Pacific Northwest National Laboratory (PNNL), Richland, WA (United States)

Grant/Contract Number:: FA9550-05-1-0365

OSTI ID:: 1628071

Journal Information:: Frontiers in Microbiology, Vol. 3; ISSN 1664-302X

Publisher:: Frontiers Research FoundationCopyright Statement

Country of Publication:: United States

Language:: English

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Journal Article · Tue Apr 29 00:00:00 EDT 2014 · The ISME Journal, 8(11):2243-2255 · OSTI ID:1628071

Beliaev, Alex S.; Romine, Margaret F.; Serres, Margaret; +12 more

The ecology and genomics of C02 fixation in oceanic river plumes

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Tabita, F Robert

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59 BASIC BIOLOGICAL SCIENCES
microbiology
cyanobacteria
transcription profiling
RNAseq
temperature
heat shock
salinity
mixotrophy
photosynthesis

Title: Synechococcus sp. Strain PCC 7002 Transcriptome: Acclimation to Temperature, Salinity, Oxidative Stress, and Mixotrophic Growth Conditions

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