A simple polarizable model of water based on classical Drude oscillators
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journal
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September 2003 |
Polarization effects in molecular mechanical force fields
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journal
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July 2009 |
UFF, a full periodic table force field for molecular mechanics and molecular dynamics simulations
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journal
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December 1992 |
Determination of Electrostatic Parameters for a Polarizable Force Field Based on the Classical Drude Oscillator
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journal
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October 2004 |
Anisotropic Shock Sensitivity of Cyclotrimethylene Trinitramine (RDX) from Compress-and-Shear Reactive Dynamics
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journal
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April 2012 |
Theoretical studies of enzymic reactions: Dielectric, electrostatic and steric stabilization of the carbonium ion in the reaction of lysozyme
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May 1976 |
Charge equilibration for molecular dynamics simulations
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April 1991 |
Shell model simulations by adiabatic dynamics
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February 1993 |
Special Issue on Polarization
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October 2007 |
Accurate spin-dependent electron liquid correlation energies for local spin density calculations: a critical analysis
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August 1980 |
A molecular-orbital derived polarization potential for liquid water
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journal
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August 1998 |
Evaluation and Reparametrization of the OPLS-AA Force Field for Proteins via Comparison with Accurate Quantum Chemical Calculations on Peptides †
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journal
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July 2001 |
Light scattering by alkali halides melts: a comparison of shell-model and rigid-ion computer simulation results
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November 1991 |
Fast Parallel Algorithms for Short-Range Molecular Dynamics
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journal
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March 1995 |
Molecular dynamics simulations of the d(CCAACGTTGG)2 decamer in crystal environment: Comparison of atomic point-charge, extra-point, and polarizable force fields
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journal
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October 2004 |
Templates for the Solution of Linear Systems: Building Blocks for Iterative Methods
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book
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January 1994 |
Design of a Next Generation Force Field: The X-POL Potential
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August 2007 |
Atomic charges derived from electrostatic potentials: A detailed study
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September 1987 |
Polarization effects and charge transfer in the KcsA potassium channel
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journal
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December 2006 |
Force fields, structures, and properties of poly(vinylidene fluoride) crystals
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December 1992 |
Density-functional exchange-energy approximation with correct asymptotic behavior
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September 1988 |
Scalable Algorithms for Molecular Dynamics Simulations on Commodity Clusters
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conference
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November 2006 |
Self‐consistent molecular orbital methods. XX. A basis set for correlated wave functions
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journal
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January 1980 |
The ferroelectric and cubic phases in BaTiO3 ferroelectrics are also antiferroelectric
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September 2006 |
Polarization model for water and its ionic dissociation products
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journal
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August 1978 |
All-Atom Empirical Potential for Molecular Modeling and Dynamics Studies of Proteins †
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journal
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April 1998 |
The M06 suite of density functionals for main group thermochemistry, thermochemical kinetics, noncovalent interactions, excited states, and transition elements: two new functionals and systematic testing of four M06-class functionals and 12 other functionals
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July 2007 |
CHARMM fluctuating charge force field for proteins: II Protein/solvent properties from molecular dynamics simulations using a nonadditive electrostatic model
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January 2004 |
Many-body effects and simulations of potassium channels
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journal
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March 2009 |
Accounting for polarization in molecular simulation
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journal
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November 2005 |
Development and testing of a general amber force field
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journal
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January 2004 |
Cooperative effects in simulated water
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journal
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November 1979 |
A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules
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journal
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May 1995 |
OPLS3: A Force Field Providing Broad Coverage of Drug-like Small Molecules and Proteins
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journal
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December 2015 |
Empirical force fields for biological macromolecules: Overview and issues
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January 2004 |
Electronic Population Analysis on LCAO–MO Molecular Wave Functions. I
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October 1955 |
Modeling induced polarization with classical Drude oscillators: Theory and molecular dynamics simulation algorithm
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journal
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August 2003 |
Can Water Polarizability Be Ignored in Hydrogen Bond Kinetics?
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journal
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February 2002 |
Accurate Calculation of Hydration Free Energies using Pair-Specific Lennard-Jones Parameters in the CHARMM Drude Polarizable Force Field
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journal
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March 2010 |
Reactive Molecular Dynamics: Numerical Methods and Algorithmic Techniques
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journal
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January 2012 |
Density‐functional thermochemistry. III. The role of exact exchange
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journal
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April 1993 |
A polarizable model for water using distributed charge sites
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journal
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December 1988 |
An overview of the Amber biomolecular simulation package: Amber biomolecular simulation package
- Salomon-Ferrer, Romelia; Case, David A.; Walker, Ross C.
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Wiley Interdisciplinary Reviews: Computational Molecular Science, Vol. 3, Issue 2
https://doi.org/10.1002/wcms.1121
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journal
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September 2012 |
Molecular dynamics simulations of liquid methanol and methanol–water mixtures with polarizable models
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journal
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January 2006 |
Development and Testing of the OPLS All-Atom Force Field on Conformational Energetics and Properties of Organic Liquids
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journal
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January 1996 |
Shell model molecular dynamics calculations of the Raman spectra of molten NaI
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journal
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April 1989 |
Is the Induction Energy Important for Modeling Organic Crystals?
- Welch, Gareth W. A.; Karamertzanis, Panagiotis G.; Misquitta, Alston J.
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Journal of Chemical Theory and Computation, Vol. 4, Issue 3
https://doi.org/10.1021/ct700270d
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February 2008 |
Importance of accurate charges in molecular docking: Quantum mechanical/molecular mechanical (QM/MM) approach
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journal
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January 2005 |
Development of Many−Body Polarizable Force Fields for Li-Battery Applications: 2. LiTFSI-Doped Oligoether, Polyether, and Carbonate-Based Electrolytes
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journal
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March 2006 |
Polarizable force fields
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journal
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April 2001 |
Polarizable Atomic Multipole-Based AMOEBA Force Field for Proteins
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journal
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August 2013 |
Optimization of the Additive CHARMM All-Atom Protein Force Field Targeting Improved Sampling of the Backbone ϕ, ψ and Side-Chain χ 1 and χ 2 Dihedral Angles
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journal
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August 2012 |
CHARMM: A program for macromolecular energy, minimization, and dynamics calculations
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journal
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July 1983 |
NAMD: a Parallel, Object-Oriented Molecular Dynamics Program
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journal
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December 1996 |
Atom dipole interaction model for molecular polarizability. Application to polyatomic molecules and determination of atom polarizabilities
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journal
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May 1972 |
ReaxFF- l g: Correction of the ReaxFF Reactive Force Field for London Dispersion, with Applications to the Equations of State for Energetic Materials
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journal
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October 2011 |
ReaxFF: A Reactive Force Field for Hydrocarbons
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journal
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October 2001 |
Toward a Process-Based Molecular Model of SiC Membranes. 1. Development of a Reactive Force Field
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journal
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February 2013 |
Accurate Induction Energies for Small Organic Molecules. 2. Development and Testing of Distributed Polarizability Models against SAPT(DFT) Energies
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journal
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November 2007 |
Charge-on-spring polarizable water models revisited: From water clusters to liquid water to ice
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journal
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November 2004 |
Recent applications and developments of charge equilibration force fields for modeling dynamical charges in classical molecular dynamics simulations
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journal
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March 2012 |
Ab Initio Quantum Chemical and Mixed Quantum Mechanics/Molecular Mechanics (Qm/Mm) Methods for Studying Enzymatic Catalysis
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journal
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May 2005 |
Collective dynamics in super-ionic CaF 2 . II. Defect interpretation
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journal
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July 1986 |
The OPLS [optimized potentials for liquid simulations] potential functions for proteins, energy minimizations for crystals of cyclic peptides and crambin
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journal
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March 1988 |
Water and potassium dynamics inside the KcsA K + channel
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journal
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July 2000 |
Charge-dipole model to compute the polarization of fullerenes
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journal
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August 2006 |
Dispersion energies for small organic molecules: first row atoms
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journal
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June 2008 |
Charge equilibration force fields for molecular dynamics simulations of lipids, bilayers, and integral membrane protein systems
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journal
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February 2012 |
Self‐consistent molecular orbital methods 25. Supplementary functions for Gaussian basis sets
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journal
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April 1984 |
Accurate Induction Energies for Small Organic Molecules: 1. Theory
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journal
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November 2007 |
Parallel reactive molecular dynamics: Numerical methods and algorithmic techniques
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journal
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April 2012 |
Local polarization dynamics in ferroelectric materials
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journal
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April 2010 |
A mobile charge densities in harmonic oscillators (MCDHO) molecular model for numerical simulations: The water–water interaction
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journal
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December 2000 |
A polarizable model of water for molecular dynamics simulations of biomolecules
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journal
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January 2006 |
Development of Polarizable Models for Molecular Mechanical Calculations II: Induced Dipole Models Significantly Improve Accuracy of Intermolecular Interaction Energies
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journal
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March 2011 |
Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density
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journal
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January 1988 |
Polarizable Empirical Force Field for the Primary and Secondary Alcohol Series Based on the Classical Drude Model
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journal
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August 2007 |
Water liquid-vapor equilibria predicted by refined ab initio derived potentials
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journal
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July 2005 |
Electronic Structures of Molecules XI. Electroaffinity, Molecular Orbitals and Dipole Moments
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journal
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September 1935 |
Self—Consistent Molecular Orbital Methods. XII. Further Extensions of Gaussian—Type Basis Sets for Use in Molecular Orbital Studies of Organic Molecules
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March 1972 |