skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Improved molecular level identification of organic compounds using comprehensive two-dimensional chromatography, dual ionization energies and high resolution mass spectrometry

Journal Article · · Analyst
DOI:https://doi.org/10.1039/c7an00625j· OSTI ID:1456975

A new analytical methodology combining comprehensive two-dimensional gas chromatography (GC×GC), dual ionization energies and high resolution time of flight mass spectrometry has been developed that improves molecular level identification of organic compounds in complex environmental samples. GC×GC maximizes compound separation providing cleaner mass spectra by minimizing erroneous fragments from interferences and co-eluting peaks. Traditional electron ionization (EI, 70 eV) provides MS fragmentation patterns that can be matched to published EI MS libraries while vacuum ultraviolet photoionization (VUV, 10.5 eV) yields MS with reduced fragmentation enhancing the abundance of the molecular ion providing molecular formulas when combined with high resolution mass spectrometry. We demonstrate this new approach by applying it to a sample of organic aerosol. In this sample, 238 peaks were matched to EI MS library data with FM ≥ 800 but a fifth (42 compounds) were determined to be incorrectly identified because the molecular formula was not confirmed by the VUV MS data. This highlights the importance of using a complementary technique to confirm compound identifications even for peaks with very good matching statistics. In total, 171 compounds were identified by EI MS matching to library spectra with confirmation of the molecular formula from the high resolution VUV MS data and were not dependent on the matching statistics being above a threshold value. A large number of unidentified peaks were still observed with FM < 800, which in routine analysis would typically be neglected. Where possible, these peaks were assigned molecular formulas from the VUV MS data (211 in total). In total, the combination of EI and VUV MS data provides more than twice as much molecular level peak information than traditional approaches and improves confidence in the identification of individual organic compounds. The molecular formula data from the VUV MS data was used, in conjunction with GC×GC retention times and the observed EI MS, to generate a new, searchable EI MS library compatible with the standard NIST MS search program. This library is deliberately dynamic and editable so that other end users can add new entries and update existing entries as new information becomes available.A new analytical methodology has been developed to improve molecular level identification of organic compounds in complex samples.

Research Organization:
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Basic Energy Sciences (BES). Chemical Sciences, Geosciences, and Biosciences Division; National Science Foundation (NSF)
Grant/Contract Number:
AC02-05CH11231; 0922562
OSTI ID:
1456975
Journal Information:
Analyst, Vol. 142, Issue 13; ISSN 0003-2654
Publisher:
Royal Society of ChemistryCopyright Statement
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 27 works
Citation information provided by
Web of Science

References (30)

A review of current applications of mass spectrometry for biomarker/molecular tracer elucidations journal January 2005
Oil Weathering after the Deepwater Horizon Disaster Led to the Formation of Oxygenated Residues journal August 2012
Carbon oxidation state as a metric for describing the chemistry of atmospheric organic aerosol journal January 2011
Heterogeneous OH Oxidation of Motor Oil Particles Causes Selective Depletion of Branched and Less Cyclic Hydrocarbons journal September 2012
A Mass Scale Based on CH 2 = 14.0000 for High Resolution Mass Spectrometry of Organic Compounds. journal December 1963
Estimating probabilities of correct identification from results of mass spectral library searches journal April 1994
Origins and composition of fine atmospheric carbonaceous aerosol in the Sierra Nevada Mountains, California journal January 2011
Observational Insights into Aerosol Formation from Isoprene journal September 2013
Known and Unexplored Organic Constituents in the Earth's Atmosphere journal March 2007
The Influence of Molecular Structure and Aerosol Phase on the Heterogeneous Oxidation of Normal and Branched Alkanes by OH journal May 2013
Improved Resolution of Hydrocarbon Structures and Constitutional Isomers in Complex Mixtures Using Gas Chromatography-Vacuum Ultraviolet-Mass Spectrometry journal February 2012
Field-Deployable, High-Resolution, Time-of-Flight Aerosol Mass Spectrometer journal December 2006
Gas-chromatographische Charakterisierung organischer Verbindungen. Teil 1: Retentionsindices aliphatischer Halogenide, Alkohole, Aldehyde und Ketone journal January 1958
OH-Initiated Heterogeneous Oxidation of Cholestane: A Model System for Understanding the Photochemical Aging of Cyclic Alkane Aerosols journal November 2013
Thermal desorption comprehensive two-dimensional gas chromatography for in-situ measurements of organic aerosols journal April 2008
Search criteria and rules for comprehensive two-dimensional gas chromatography–time-of-flight mass spectrometry analysis of airborne particulate matter journal November 2003
Light and Molecular Ions: The Emergence of Vacuum UV Single-Photon Ionization in MS journal June 2009
Thermal Desorption Comprehensive Two-Dimensional Gas Chromatography: An Improved Instrument for In-Situ Speciated Measurements of Organic Aerosols journal April 2012
Comprehensive two-dimensional gas chromatography coupled to time-of-flight mass spectrometry in the identification of organic compounds in atmospheric aerosols from coniferous forest journal September 2006
Comprehensive multidimensional separation methods by hyphenation of single-photon ionization time-of-flight mass spectrometry (SPI-TOF-MS) with GC and GC×GC journal July 2010
Using Comprehensive Two-Dimensional Gas Chromatography to Study the Atmosphere journal April 2010
Comprehensive Chemical Characterization of Hydrocarbons in NIST Standard Reference Material 2779 Gulf of Mexico Crude Oil journal October 2015
Optimization and testing of mass spectral library search algorithms for compound identification journal September 1994
Source apportionment of airborne particulate matter using organic compounds as tracers journal November 1996
Bioremediation approaches for organic pollutants: A critical perspective journal November 2011
Understanding evolution of product composition and volatility distribution through in-situ GC × GC analysis: a case study of longifolene ozonolysis journal January 2011
Comprehensive Two-Dimensional Gas Chromatography using an On-Column Thermal Modulator Interface journal June 1991
Volatilizable Biogenic Organic Compounds (VBOCs) with two dimensional Gas Chromatography-Time of Flight Mass Spectrometry (GC × GC-TOFMS): sampling methods, VBOC complexity, and chromatographic retention data journal January 2012
Major components of atmospheric organic aerosol in southern California as determined by hourly measurements of source marker compounds journal January 2010
Performance of the vacuum ultraviolet high-resolution and high-flux beamline for chemical dynamics studies at the Advanced Light Source journal May 1997

Cited By (5)

Facile Preparation of Hydrophilic-Bifunctional-Groups Modified Magnetic Microspheres as a Novel Matrix for Detection of Phthalate Esters from Human Plasma Samples journal September 2018
Monoterpenes are the largest source of summertime organic aerosol in the southeastern United States journal February 2018
Observations of sesquiterpenes and their oxidation products in central Amazonia during the wet and dry seasons journal January 2018
Measurements of I/SVOCs in biomass-burning smoke using solid-phase extraction disks and two-dimensional gas chromatography journal January 2018
Speciated and total emission factors of particulate organics from burning western US wildland fuels and their dependence on combustion efficiency journal January 2019