Contribution of mobile genetic elements to Desulfovibrio vulgaris genome plasticity
- University of Washington, Seattle
- University of Washington
- Lawrence Berkeley National Laboratory (LBNL)
- University of Oklahoma
- ORNL
- University of Missouri, Columbia
The genome of Desulfovibrio vulgaris strain DePue, a sulfate-reducing Deltaproteobacterium isolated from heavy metal-impacted lake sediment, was completely sequenced and compared with the type strain D. vulgaris Hildenborough. The two genomes share a high degree of relatedness and synteny, but harbour distinct prophage and signatures of past phage encounters. In addition to a highly variable phage contribution, the genome of strain DePue contains a cluster of open-reading frames not found in strain Hildenborough coding for the production and export of a capsule exopolysaccharide, possibly of relevance to heavy metal resistance. Comparative whole-genome microarray analysis on four additional D. vulgaris strains established greater interstrain variation within regions associated with phage insertion and exopolysaccharide biosynthesis.
- Research Organization:
- Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
- Sponsoring Organization:
- USDOE Office of Science (SC)
- DOE Contract Number:
- DE-AC05-00OR22725
- OSTI ID:
- 963705
- Journal Information:
- Environmental Microbiology, Vol. 11, Issue 9; ISSN 1462-2912
- Country of Publication:
- United States
- Language:
- English
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