skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Lignin depolymerization by fungal secretomes and a microbial sink

Journal Article · · Green Chemistry
DOI:https://doi.org/10.1039/C6GC01531J· OSTI ID:1331971
 [1];  [1];  [1];  [1];  [1];  [1];  [2];  [2];  [3];  [3];  [3];  [4];  [5];  [1]
  1. National Renewable Energy Lab. (NREL), Golden, CO (United States)
  2. Pacific Northwest National Lab. (PNNL), Richland, WA (United States)
  3. Consejo Superior de Investigaciones Científicas (CSIC), Madrid (Spain)
  4. Joint BioEnergy Institute (JBEI), Emeryville, CA (United States); Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
  5. Joint BioEnergy Institute (JBEI), Emeryville, CA (United States); Sandia National Lab. (SNL-CA), Livermore, CA (United States)

Fungal ligninolytic enzymes are able to depolymerize solid lignin and the presence of an aromatic catabolic bacterium enhances this effect.

Research Organization:
National Renewable Energy Laboratory (NREL), Golden, CO (United States); Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Organization:
USDOE Office of Energy Efficiency and Renewable Energy (EERE), Sustainable Transportation Office. Bioenergy Technologies Office (BETO); USDOE Office of Science (SC), Biological and Environmental Research (BER)
Grant/Contract Number:
AC36-08GO28308; AC02-05CH11231
OSTI ID:
1331971
Alternate ID(s):
OSTI ID: 1440916
Report Number(s):
NREL/JA-5100-67108
Journal Information:
Green Chemistry, Vol. 18, Issue 22; ISSN 1463-9262
Publisher:
Royal Society of ChemistryCopyright Statement
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 69 works
Citation information provided by
Web of Science

References (68)

Cell wall modifications triggered by the down-regulation of Coumarate 3-hydroxylase-1 in maize journal July 2015
Laccase detoxification of steam-exploded wheat straw for second generation bioethanol journal December 2009
Fungal Laccases and Their Applications in Bioremediation journal January 2014
Fungal Cellulases journal January 2015
Lignin Changes after Steam Explosion and Laccase-Mediator Treatment of Eucalyptus Wood Chips journal August 2011
Towards lignin consolidated bioprocessing: simultaneous lignin depolymerization and product generation by bacteria journal January 2015
Sugar recoveries from wheat straw following treatments with the fungus Irpex lacteus journal March 2013
Identification of DypB from Rhodococcus jostii RHA1 as a Lignin Peroxidase journal June 2011
Upgrading of an industrial lignin by using laccase produced by Fusarium proliferatum and different laccase-mediator systems journal January 2006
Oxidative upgrade of lignin – Recent routes reviewed journal June 2013
Specific degradation ofβ-aryl ether linkage in synthetic lignin (dehydrogenative polymerizate) by bacterial enzymes ofSphingomonas paucimobilis SYK-6 produced in recombinantEscherichia coli journal October 2002
Efficient bleaching of non-wood high-quality paper pulp using laccase-mediator system journal August 2004
Purification and characterization of peroxidases from the dye-decolorizing fungus Bjerkandera adusta journal August 1998
Ligninolytic peroxidase genes in the oyster mushroom genome: heterologous expression, molecular structure, catalytic and stability properties, and lignin-degrading ability journal January 2014
Helically agitated mixing in dry dilute acid pretreatment enhances the bioconversion of corn stover into ethanol journal January 2014
DeconMSn: a software tool for accurate parent ion monoisotopic mass determination for tandem mass spectra journal February 2008
Pretreatment with laccase and a phenolic mediator degrades lignin and enhances saccharification of Eucalyptus feedstock journal January 2014
A method for the quantitative recovery of protein in dilute solution in the presence of detergents and lipids journal April 1984
Application of the Accurate Mass and Time Tag Approach to the Proteome Analysis of Sub-cellular Fractions Obtained from Rhodobacter s phaeroides 2.4.1. Aerobic and Photosynthetic Cell Cultures journal August 2006
SignalP 4.0: discriminating signal peptides from transmembrane regions journal September 2011
Bacterial versus fungal laccase: potential for micropollutant degradation journal January 2013
Chemically Etched Open Tubular and Monolithic Emitters for Nanoelectrospray Ionization Mass Spectrometry journal November 2006
Differential proteomic analysis of the secretome of Irpex lacteus and other white-rot fungi during wheat straw pretreatment journal January 2013
Paper pulp delignification using laccase and natural mediators journal April 2007
Solution-state 2D NMR of Ball-milled Plant Cell Wall Gels in DMSO-d 6 journal March 2008
Characterization of a Novel Dye-Decolorizing Peroxidase (DyP)-Type Enzyme from Irpex lacteus and Its Application in Enzymatic Hydrolysis of Wheat Straw journal May 2013
Laccases and their natural mediators: Biotechnological tools for sustainable eco-friendly processes journal November 2010
Lignin valorization through integrated biological funneling and chemical catalysis journal August 2014
Enzymatic and Fungal Treatments on Sugarcane Bagasse for the Production of Mechanical Pulps journal July 2004
Basidiomycete DyPs: Genomic diversity, structural–functional aspects, reaction mechanism and environmental significance journal May 2015
Fungal aryl-alcohol oxidase: a peroxide-producing flavoenzyme involved in lignin degradation journal January 2012
The emerging role for bacteria in lignin degradation and bio-product formation journal June 2011
A secretomic view of woody and nonwoody lignocellulose degradation by Pleurotus ostreatus journal February 2016
Lignin Valorization: Improving Lignin Processing in the Biorefinery journal May 2014
A Mechanistic Investigation of Acid-Catalyzed Cleavage of Aryl-Ether Linkages: Implications for Lignin Depolymerization in Acidic Environments journal November 2013
Demonstration of laccase-based removal of lignin from wood and non-wood plant feedstocks journal September 2012
Improved ethanol yield and reduced minimum ethanol selling price (MESP) by modifying low severity dilute acid pretreatment with deacetylation and mechanical refining: 2) Techno-economic analysis journal January 2012
Peroxidases depolymerize lignin in organic media but not in water journal September 1986
Pathways for degradation of lignin in bacteria and fungi journal January 2011
New insights into the structure and composition of technical lignins: a comparative characterisation study journal January 2016
Demonstration of Lignin-to-Peroxidase Direct Electron Transfer: A TRANSIENT-STATE KINETICS, DIRECTED MUTAGENESIS, EPR, AND NMR STUDY journal August 2015
Structural modification of eucalypt pulp lignin in a totally chlorine-free bleaching sequence including a laccase-mediator stage journal November 2007
Veratryl Alcohol Oxidase from Pleurotus ostreatus Participates in Lignin Biodegradation and Prevents Polymerization of Laccase-oxidized Substrates journal February 1995
Whole plant cell wall characterization using solution-state 2D NMR journal August 2012
Versatile peroxidase as a valuable tool for generating new biomolecules by homogeneous and heterogeneous cross-linking journal May 2013
Kinetic analysis of regional agro-industrial waste combustion journal July 2016
Opportunities and challenges in biological lignin valorization journal December 2016
Adipic acid production from lignin journal January 2015
Target-Decoy Search Strategy for Mass Spectrometry-Based Proteomics book December 2009
Fungal pretreatment: An alternative in second-generation ethanol from wheat straw journal August 2011
Basic local alignment search tool journal October 1990
DMR (deacetylation and mechanical refining) processing of corn stover achieves high monomeric sugar concentrations (230 g L −1 ) during enzymatic hydrolysis and high ethanol concentrations (>10% v/v) during fermentation without hydrolysate purification or concentration journal January 2016
Molecular biology and structure-function of lignin-degrading heme peroxidases journal April 2002
Synergistic enzymatic and microbial lignin conversion journal January 2016
From gene to biorefinery: microbial β-etherases as promising biocatalysts for lignin valorization journal September 2015
Effects of laccase on lignin depolymerization and enzymatic hydrolysis of ensiled corn stover journal August 2012
Conversion of Milled Pine Wood by Manganese Peroxidase from Phlebia radiata journal October 2001
Biomass Fractionation for the Biorefinery: Heteronuclear Multiple Quantum Coherence–Nuclear Magnetic Resonance Investigation of Lignin Isolated from Solvent Fractionation of Switchgrass journal September 2011
In vitro degradation of natural insoluble lignin in aqueous media by the extracellular peroxidases of Phanerochaete chrysosporium journal March 1998
Novel multienzyme oxidative biocatalyst for lignin bioprocessing journal August 2011
p -Hydroxycinnamic Acids as Natural Mediators for Laccase Oxidation of Recalcitrant Compounds journal September 2008
Oxidation of milled wood lignin with laccase, tyrosinase and horseradish peroxidase journal December 2004
Improved Xylan Hydrolysis of Corn Stover by Deacetylation with High Solids Dilute Acid Pretreatment journal December 2011
Can laccases catalyze bond cleavage in lignin? journal January 2015
Towards industrially-feasible delignification and pitch removal by treating paper pulp with Myceliophthora thermophila laccase and a phenolic mediator journal June 2011
Self-made frits for nanoscale columns in proteomics journal October 2005
Fungal cellulases journal February 1992
Demonstration of lignin-to-peroxidase direct electron transfer. A TRANSIENT-STATE KINETICS, DIRECTED MUTAGENESIS, EPR AND NMR STUDY. journal December 2015

Cited By (10)

Biotransformation of lignin: Mechanisms, applications and future work journal October 2019
Bioethanol Mill Wastewater Purification by Combination of Coagulation-Flocculation and Microbial Treatment of Trametes versicolor INACC F200 journal August 2019
Lignin Depolymerization to BTXs journal September 2019
Enabling microbial syringol conversion through structure-guided protein engineering journal June 2019
Metabolic engineering of Pseudomonas putida for increased polyhydroxyalkanoate production from lignin journal January 2020
Enzyme biotechnology in degradation and modification of plant cell wall polymers journal August 2018
Development of a genetically programed vanillin-sensing bacterium for high-throughput screening of lignin-degrading enzyme libraries journal February 2017
Differential β-glucosidase expression as a function of carbon source availability in Talaromyces amestolkiae: a genomic and proteomic approach journal June 2017
A bionic system with Fenton reaction and bacteria as a model for bioprocessing lignocellulosic biomass journal February 2018
Lignin Depolymerization to BTXs book September 2019

Figures / Tables (10)