Complete genome sequence of Odoribacter splanchnicus type strain (1651/6T)

Journal Article · Sat Jan 01 00:00:00 EST 2011 · Standards in Genomic Sciences

DOI:https://doi.org/10.4056/sigs.1714269· OSTI ID:1018664

Goker, Markus ^[1]; Gronow, Sabine ^[1]; Zeytun, Ahmet ^[2]; Nolan, Matt ^[3]; Lucas, Susan ^[3]; Lapidus, Alla L ^[3]; Hammon, Nancy ^[3]; Deshpande, Shweta ^[3]; Cheng, Jan-Fang ^[3]; Pitluck, Sam ^[3]; Liolios, Konstantinos ^[3]; Pagani, Ioanna ^[3]; Ivanova, N ^[4]; Mavromatis, K ^[4]; Ovchinnikova, Galina ^[4]; Pati, Amrita ^[4]; Tapia, Roxanne ^[2]; Han, Cliff ^[2]; Goodwin, Lynne A ^[2]; Chen, Amy ^[3] ; Palaniappan, Krishna ^[3]; Land, Miriam L ^[5]; Hauser, Loren John ^[5]; Jeffries, Cynthia ^[6]; Brambilla, Evelyne-Marie ^[1]; Rohde, Christine ^[1]; Detter, J Chris ^[3]; Woyke, Tanja ^[3]; Bristow, James ^[3]; Markowitz, Victor ^[3]; Hugenholtz, Philip ^[4]; Eisen, Jonathan ^[3]; Kyrpides, Nikos C ^[3]; Klenk, Hans-Peter ^[1]

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1. DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany
2. Los Alamos National Laboratory (LANL)
3. Joint Genome Institute, Walnut Creek, California
4. U.S. Department of Energy, Joint Genome Institute
5. ORNL
6. Oak Ridge National Laboratory (ORNL)

Odoribacter splanchnicus (Werner et al. 1975) Hardham et al. 2008 is the type species of the genus Odoribacter, which belongs to the family Porphyromonadaceae in the order Bacteroidales . The species is of interest because members of the Odoribacter form an isolated cluster within the Porphyromonadaceae. This is the first completed genome sequence of a member of the genus Odoribacter and the fourth sequence from the family Porphyromonadaceae. The 4,392,288 bp long genome with its 3,672 protein-coding and 74 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

• Research Organization: Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
• Sponsoring Organization: Work for Others (WFO)
• DOE Contract Number: DE-AC05-00OR22725
• OSTI ID: 1018664
• Journal Information: Standards in Genomic Sciences, Vol. 4, Issue 2; ISSN 1944--3277
• Country of Publication: United States
• Language: English

Related Subjects

59 BASIC BIOLOGICAL SCIENCES
99 GENERAL AND MISCELLANEOUS//MATHEMATICS, COMPUTING, AND INFORMATION SCIENCE
BACTERIA
GENES
RNA
STRAINS
strictly anaerobic
non-motile
Gram-negative
opportunistic pathogen
mesophilic
chemoorganotrophic
Porphyromonadaceae
GEBA