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Title: Light-Stress Influences the Composition of the Murine Gut Microbiome, Memory Function, and Plasma Metabolome

Abstract

The gut microbiome plays an important role in the mammalian host and when in proper balance helps protect health and prevent disease. Host environmental stress and its influence on the gut microbiome, health, and disease is an emerging area of research. Exposures to unnatural light cycles are becoming increasingly common due to travel and shift work. However, much remains unknown about how these changes influence the microbiome and host health. This information is needed to understand and predict the relationship between the microbiome and host response to altered sleep cycles. In the present study, we exposed three cohorts of mice to different light cycle regimens for 12 consecutive weeks; including continuous light, continuous dark, and a standard light dark regimen consisting of 12 h light followed by 12 h of dark. After exposure, motor and memory behavior, and the composition of the fecal microbiome and plasma metabolome were measured. Memory potential was significantly reduced in mice exposed to continuous light, whereas rotarod performance was minimally affected. The overall composition of the microbiome was relatively constant over time. However, Bacteroidales Rikenellaceae was relatively more abundant in mice exposed to continuous dark, while Bacteroidales S24-7 was relatively more abundant in mice exposedmore » to continuous light. The plasma metabolome after the continuous dark exposure differed from the other exposure conditions. Several plasma metabolites, including glycolic acid, tryptophan, pyruvate, and several unidentified metabolites, were correlated to continuous dark and light exposure conditions. Networking analyses showed that serotonin was positively correlated with three microbial families (Rikenellaceae, Ruminococcaceae, and Turicibacteraceae), while tryptophan was negatively correlated with abundance of Bacteroidales S24-7 based on light exposure. This study provides the foundation for future studies into the mechanisms underlying the role of the gut microbiome on the murine host during light-dark stress.« less

Authors:
ORCiD logo [1];  [2]; ORCiD logo [1]; ORCiD logo [3]; ORCiD logo [1];  [1]; ORCiD logo [1];  [2];  [1]
  1. Pacific Northwest National Lab. (PNNL), Richland, WA (United States). Biological Sciences Div.
  2. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Biological Systems and Engineering Div.
  3. Pacific Northwest National Lab. (PNNL), Richland, WA (United States). Computing and Analytics Div.
Publication Date:
Research Org.:
Pacific Northwest National Laboratory (PNNL), Richland, WA (United States); Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Org.:
USDOE Office of Science (SC)
OSTI Identifier:
1574891
Alternate Identifier(s):
OSTI ID: 1581324
Report Number(s):
PNNL-SA-144001
Journal ID: ISSN 2296-889X
Grant/Contract Number:  
AC05-76RL01830; AC02-05CH11231
Resource Type:
Accepted Manuscript
Journal Name:
Frontiers in Molecular Biosciences
Additional Journal Information:
Journal Volume: 6; Journal ID: ISSN 2296-889X
Publisher:
Frontiers Media SA
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES; light stress; sleep cycle; gut microbiome; plasma metabolome; behavior change; memory function

Citation Formats

Kim, Young -Mo, Snijders, Antoine M., Brislawn, Colin J., Stratton, Kelly G., Zink, Erika M., Fansler, Sarah J., Metz, Thomas O., Mao, Jian -Hua, and Jansson, Janet K. Light-Stress Influences the Composition of the Murine Gut Microbiome, Memory Function, and Plasma Metabolome. United States: N. p., 2019. Web. doi:10.3389/fmolb.2019.00108.
Kim, Young -Mo, Snijders, Antoine M., Brislawn, Colin J., Stratton, Kelly G., Zink, Erika M., Fansler, Sarah J., Metz, Thomas O., Mao, Jian -Hua, & Jansson, Janet K. Light-Stress Influences the Composition of the Murine Gut Microbiome, Memory Function, and Plasma Metabolome. United States. https://doi.org/10.3389/fmolb.2019.00108
Kim, Young -Mo, Snijders, Antoine M., Brislawn, Colin J., Stratton, Kelly G., Zink, Erika M., Fansler, Sarah J., Metz, Thomas O., Mao, Jian -Hua, and Jansson, Janet K. Fri . "Light-Stress Influences the Composition of the Murine Gut Microbiome, Memory Function, and Plasma Metabolome". United States. https://doi.org/10.3389/fmolb.2019.00108. https://www.osti.gov/servlets/purl/1574891.
@article{osti_1574891,
title = {Light-Stress Influences the Composition of the Murine Gut Microbiome, Memory Function, and Plasma Metabolome},
author = {Kim, Young -Mo and Snijders, Antoine M. and Brislawn, Colin J. and Stratton, Kelly G. and Zink, Erika M. and Fansler, Sarah J. and Metz, Thomas O. and Mao, Jian -Hua and Jansson, Janet K.},
abstractNote = {The gut microbiome plays an important role in the mammalian host and when in proper balance helps protect health and prevent disease. Host environmental stress and its influence on the gut microbiome, health, and disease is an emerging area of research. Exposures to unnatural light cycles are becoming increasingly common due to travel and shift work. However, much remains unknown about how these changes influence the microbiome and host health. This information is needed to understand and predict the relationship between the microbiome and host response to altered sleep cycles. In the present study, we exposed three cohorts of mice to different light cycle regimens for 12 consecutive weeks; including continuous light, continuous dark, and a standard light dark regimen consisting of 12 h light followed by 12 h of dark. After exposure, motor and memory behavior, and the composition of the fecal microbiome and plasma metabolome were measured. Memory potential was significantly reduced in mice exposed to continuous light, whereas rotarod performance was minimally affected. The overall composition of the microbiome was relatively constant over time. However, Bacteroidales Rikenellaceae was relatively more abundant in mice exposed to continuous dark, while Bacteroidales S24-7 was relatively more abundant in mice exposed to continuous light. The plasma metabolome after the continuous dark exposure differed from the other exposure conditions. Several plasma metabolites, including glycolic acid, tryptophan, pyruvate, and several unidentified metabolites, were correlated to continuous dark and light exposure conditions. Networking analyses showed that serotonin was positively correlated with three microbial families (Rikenellaceae, Ruminococcaceae, and Turicibacteraceae), while tryptophan was negatively correlated with abundance of Bacteroidales S24-7 based on light exposure. This study provides the foundation for future studies into the mechanisms underlying the role of the gut microbiome on the murine host during light-dark stress.},
doi = {10.3389/fmolb.2019.00108},
journal = {Frontiers in Molecular Biosciences},
number = ,
volume = 6,
place = {United States},
year = {Fri Oct 18 00:00:00 EDT 2019},
month = {Fri Oct 18 00:00:00 EDT 2019}
}

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Circadian rhythm disturbances in depression
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Transkingdom Control of Microbiota Diurnal Oscillations Promotes Metabolic Homeostasis
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Human Genetics Shape the Gut Microbiome
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Diet and Feeding Pattern Affect the Diurnal Dynamics of the Gut Microbiome
journal, December 2014


The future of NMR-based metabolomics
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Stress as a Normal Cue in the Symbiotic Environment
journal, May 2016


MetaboliteDetector: Comprehensive Analysis Tool for Targeted and Nontargeted GC/MS Based Metabolome Analysis
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Constant darkness is a circadian metabolic signal in mammals
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Functional interactions between the gut microbiota and host metabolism
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Endogenous circadian time genes expressions in the liver of mice under constant darkness
journal, March 2020


Endogenous circadian time genes expressions in the liver of mice under constant darkness
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