Simultaneous 3D MR elastography of the in vivo mouse brain
Abstract
The feasibility of sample interval modulation (SLIM) magnetic resonance elastography (MRE) for the in vivo mouse brain is assessed, and an alternative SLIM-MRE encoding method is introduced. In SLIMMRE, the phase accumulation for each motion direction is encoded simultaneously by varying either the start time of the motion encoding gradient (MEG), SLIM-phase constant (SLIM-PC), or the initial phase of the MEG, SLIM-phase varying (SLIM-PV). SLIM-PC provides gradient moment nulling, but the mutual gradient shift necessitates increased echo time (TE). SLIM-PV requires no increased TE, but exhibits nonuniform flow compensation. Comparison was to conventional MRE using six C57BL/6 mice. For SLIMPC, the Spearman’s rank correlation to conventional MRE for the shear storage and loss modulus images were 80% and 76%, respectively, and likewise for SLIM-PV, 73% and 69%, respectively. The results of the Wilcoxon rank sum test showed that there were no statistically significant differences between the spatially averaged shear moduli derived from conventional-MRE, SLIM-PC, and SLIM-PV acquisitions. Both SLIM approaches were comparable to conventional MRE scans with Spearman’s rank correlation of 69%-80% and with 3 times reduction in scan time. As a result, the SLIM-PC method had the best correlation, and SLIM-PV may be a useful tool in experimental conditions,more »
- Authors:
-
- Univ. of Illinois at Chicago, Chicago, IL (United States); Argonne National Lab. (ANL), Argonne, IL (United States)
- Univ. of Illinois at Chicago, Chicago, IL (United States)
- Publication Date:
- Research Org.:
- Argonne National Laboratory (ANL), Argonne, IL (United States)
- Sponsoring Org.:
- Univ. of Illinois at Chicago, Chicago, IL (United States)
- OSTI Identifier:
- 1434246
- Grant/Contract Number:
- AC02-06CH11357
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Physics in Medicine and Biology (Online)
- Additional Journal Information:
- Journal Name: Physics in Medicine and Biology (Online); Journal Volume: 62; Journal Issue: 19; Journal ID: ISSN 1361-6560
- Publisher:
- IOP Publishing
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 60 APPLIED LIFE SCIENCES; MRE; SLIM; elastography; shear modulus; simultaneous; stiffness
Citation Formats
Kearney, Steven P., Majumdar, Shreyan, Royston, Thomas J., and Klatt, Dieter. Simultaneous 3D MR elastography of the in vivo mouse brain. United States: N. p., 2017.
Web. doi:10.1088/1361-6560/aa8444.
Kearney, Steven P., Majumdar, Shreyan, Royston, Thomas J., & Klatt, Dieter. Simultaneous 3D MR elastography of the in vivo mouse brain. United States. https://doi.org/10.1088/1361-6560/aa8444
Kearney, Steven P., Majumdar, Shreyan, Royston, Thomas J., and Klatt, Dieter. Fri .
"Simultaneous 3D MR elastography of the in vivo mouse brain". United States. https://doi.org/10.1088/1361-6560/aa8444. https://www.osti.gov/servlets/purl/1434246.
@article{osti_1434246,
title = {Simultaneous 3D MR elastography of the in vivo mouse brain},
author = {Kearney, Steven P. and Majumdar, Shreyan and Royston, Thomas J. and Klatt, Dieter},
abstractNote = {The feasibility of sample interval modulation (SLIM) magnetic resonance elastography (MRE) for the in vivo mouse brain is assessed, and an alternative SLIM-MRE encoding method is introduced. In SLIMMRE, the phase accumulation for each motion direction is encoded simultaneously by varying either the start time of the motion encoding gradient (MEG), SLIM-phase constant (SLIM-PC), or the initial phase of the MEG, SLIM-phase varying (SLIM-PV). SLIM-PC provides gradient moment nulling, but the mutual gradient shift necessitates increased echo time (TE). SLIM-PV requires no increased TE, but exhibits nonuniform flow compensation. Comparison was to conventional MRE using six C57BL/6 mice. For SLIMPC, the Spearman’s rank correlation to conventional MRE for the shear storage and loss modulus images were 80% and 76%, respectively, and likewise for SLIM-PV, 73% and 69%, respectively. The results of the Wilcoxon rank sum test showed that there were no statistically significant differences between the spatially averaged shear moduli derived from conventional-MRE, SLIM-PC, and SLIM-PV acquisitions. Both SLIM approaches were comparable to conventional MRE scans with Spearman’s rank correlation of 69%-80% and with 3 times reduction in scan time. As a result, the SLIM-PC method had the best correlation, and SLIM-PV may be a useful tool in experimental conditions, where both measurement time and T2 relaxation is critical.},
doi = {10.1088/1361-6560/aa8444},
journal = {Physics in Medicine and Biology (Online)},
number = 19,
volume = 62,
place = {United States},
year = {Fri Sep 15 00:00:00 EDT 2017},
month = {Fri Sep 15 00:00:00 EDT 2017}
}
Web of Science
Works referenced in this record:
Assessment of liver viscoelasticity using multifrequency MR elastography
journal, August 2008
- Asbach, Patrick; Klatt, Dieter; Hamhaber, Uwe
- Magnetic Resonance in Medicine, Vol. 60, Issue 2
Concomitant gradient terms in phase contrast MR: Analysis and correction
journal, February 1998
- Bernstein, Mat A.; Zhou, Xiaohong Joe; Polzin, Jason A.
- Magnetic Resonance in Medicine, Vol. 39, Issue 2
Long-Term In Vivo Imaging of Viscoelastic Properties of the Mouse Brain after Controlled Cortical Impact
journal, September 2013
- Boulet, Thomas; Kelso, Matthew L.; Othman, Shadi F.
- Journal of Neurotrauma, Vol. 30, Issue 17
Frequency-dependent viscoelastic parameters of mouse brain tissue estimated by MR elastography
journal, March 2011
- Clayton, E. H.; Garbow, J. R.; Bayly, P. V.
- Physics in Medicine and Biology, Vol. 56, Issue 8
Measurement of signal-to-noise ratios in MR images: Influence of multichannel coils, parallel imaging, and reconstruction filters
journal, January 2007
- Dietrich, Olaf; Raya, José G.; Reeder, Scott B.
- Journal of Magnetic Resonance Imaging, Vol. 26, Issue 2
Cardiac Magnetic Resonance Elastography: Initial Results
journal, January 2008
- Elgeti, Thomas; Rump, Jens; Hamhaber, Uwe
- Investigative Radiology, Vol. 43, Issue 11
Alteration of brain viscoelasticity after shunt treatment in normal pressure hydrocephalus
journal, May 2011
- Freimann, Florian Baptist; Streitberger, Kaspar-Josche; Klatt, Dieter
- Neuroradiology, Vol. 54, Issue 3
Magnetic resonance elastography in the liver at 3 Tesla using a second harmonic approach: 3T Liver MRE Using a Second Harmonic Approach
journal, May 2009
- Herzka, D. A.; Kotys, M. S.; Sinkus, R.
- Magnetic Resonance in Medicine, Vol. 62, Issue 2
Exploring the Biomechanical Properties of Brain Malignancies and Their Pathologic Determinants In Vivo with Magnetic Resonance Elastography
journal, February 2015
- Jamin, Yann; Boult, Jessica K. R.; Li, Jin
- Cancer Research, Vol. 75, Issue 7
Simultaneous, multidirectional acquisition of displacement fields in magnetic resonance elastography of the in vivo human brain: SLIM-MRE of in Vivo Human Brain
journal, November 2014
- Klatt, Dieter; Johnson, Curtis L.; Magin, Richard L.
- Journal of Magnetic Resonance Imaging, Vol. 42, Issue 2
Sample interval modulation for the simultaneous acquisition of displacement vector data in magnetic resonance elastography: theory and application
journal, November 2013
- Klatt, Dieter; Yasar, Temel K.; Royston, Thomas J.
- Physics in Medicine and Biology, Vol. 58, Issue 24
A feasibility study of MR elastography in the diagnosis of prostate cancer at 3.0T
journal, April 2011
- Li, Saying; Chen, Min; Wang, Wenchao
- Acta Radiologica, Vol. 52, Issue 3
Magnetic resonance elastography: Non-invasive mapping of tissue elasticity
journal, December 2001
- Manduca, A.; Oliphant, T. E.; Dresner, M. A.
- Medical Image Analysis, Vol. 5, Issue 4
Magnetic resonance elastography: A review
journal, June 2010
- Mariappan, Yogesh K.; Glaser, Kevin J.; Ehman, Richard L.
- Clinical Anatomy, Vol. 23, Issue 5
MR elastography of human lung parenchyma: Technical development, theoretical modeling and in vivo validation
journal, May 2011
- Mariappan, Yogesh K.; Glaser, Kevin J.; Hubmayr, Rolf D.
- Journal of Magnetic Resonance Imaging, Vol. 33, Issue 6
Suitability of poroelastic and viscoelastic mechanical models for high and low frequency MR elastography: Poroelastic and viscoelastic models for MRE
journal, January 2015
- McGarry, M. D. J.; Johnson, C. L.; Sutton, B. P.
- Medical Physics, Vol. 42, Issue 2
Multiresolution MR elastography using nonlinear inversion: Multiresolution MR elastography using nonlinear inversion
journal, October 2012
- McGarry, M. D. J.; Van Houten, E. E. W.; Johnson, C. L.
- Medical Physics, Vol. 39, Issue 10
Magnetic resonance elastography of the brain in a mouse model of Alzheimer's disease: initial results
journal, May 2012
- Murphy, Matthew C.; Curran, Geoffrey L.; Glaser, Kevin J.
- Magnetic Resonance Imaging, Vol. 30, Issue 4
Decreased brain stiffness in Alzheimer's disease determined by magnetic resonance elastography
journal, July 2011
- Murphy, Matthew C.; Huston, John; Jack, Clifford R.
- Journal of Magnetic Resonance Imaging, Vol. 34, Issue 3
Magnetic resonance elastography by direct visualization of propagating acoustic strain waves
journal, September 1995
- Muthupillai, R.; Lomas, D.; Rossman, P.
- Science, Vol. 269, Issue 5232
A framework for optimization-based design of motion encoding in magnetic resonance elastography: Optimization-Based Design of Motion Encoding in MRE
journal, May 2014
- Nir, Guy; Sahebjavaher, Ramin S.; Sinkus, Ralph
- Magnetic Resonance in Medicine, Vol. 73, Issue 4
Fractional encoding of harmonic motions in MR elastography
journal, January 2007
- Rump, Jens; Klatt, Dieter; Braun, Jürgen
- Magnetic Resonance in Medicine, Vol. 57, Issue 2
Non-invasive measurement of brain viscoelasticity using magnetic resonance elastography
journal, January 2008
- Sack, Ingolf; Beierbach, Bernd; Hamhaber, Uwe
- NMR in Biomedicine, Vol. 21, Issue 3
Demyelination reduces brain parenchymal stiffness quantified in vivo by magnetic resonance elastography
journal, April 2012
- Schregel, K.; Wuerfel nee Tysiak, E.; Garteiser, P.
- Proceedings of the National Academy of Sciences, Vol. 109, Issue 17
Feasibility of using 3D MR elastography to determine pancreatic stiffness in healthy volunteers: 3D MRE of the Pancreas
journal, February 2014
- Shi, Yu; Glaser, Kevin J.; Venkatesh, Sudhakar K.
- Journal of Magnetic Resonance Imaging, Vol. 41, Issue 2
Viscoelastic shear properties of in vivo breast lesions measured by MR elastography
journal, February 2005
- Sinkus, Ralph; Tanter, Mickael; Xydeas, Tanja
- Magnetic Resonance Imaging, Vol. 23, Issue 2
In vivo viscoelastic properties of the brain in normal pressure hydrocephalus
journal, January 2010
- Streitberger, Kaspar-Josche; Wiener, Edzard; Hoffmann, Jan
- NMR in Biomedicine
MR Elastography of Liver Tumors: Preliminary Results
journal, June 2008
- Venkatesh, Sudhakar K.; Yin, Meng; Glockner, James F.
- American Journal of Roentgenology, Vol. 190, Issue 6
MR-elastography reveals degradation of tissue integrity in multiple sclerosis
journal, February 2010
- Wuerfel, Jens; Paul, Friedemann; Beierbach, Bernd
- NeuroImage, Vol. 49, Issue 3
Assessment of Hepatic Fibrosis With Magnetic Resonance Elastography
journal, October 2007
- Yin, Meng; Talwalkar, Jayant A.; Glaser, Kevin J.
- Clinical Gastroenterology and Hepatology, Vol. 5, Issue 10
Simultaneous MR elastography and diffusion acquisitions: Diffusion-MRE (dMRE): Simultaneous MRE and Diffusion Acquisitions
journal, March 2014
- Yin, Ziying; Magin, Richard L.; Klatt, Dieter
- Magnetic Resonance in Medicine, Vol. 71, Issue 5
Works referencing / citing this record:
The apparent mechanical effect of isolated amyloid‐β and α‐synuclein aggregates revealed by multi‐frequency MRE
journal, November 2019
- Bigot, Mathilde; Chauveau, Fabien; Amaz, Camille
- NMR in Biomedicine, Vol. 33, Issue 1
Simultaneous multislice rapid magnetic resonance elastography of the liver
journal, January 2020
- Majeed, Waqas; Kalra, Prateek; Kolipaka, Arunark
- NMR in Biomedicine, Vol. 33, Issue 4