DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Phosphotyrosine-mediated LAT assembly on membranes drives kinetic bifurcation in recruitment dynamics of the Ras activator SOS

Abstract

The assembly of cell surface receptors with downstream signaling molecules is a commonly occurring theme in multiple signaling systems. However, little is known about how these assemblies modulate reaction kinetics and the ultimate propagation of signals. Here, we reconstitute phosphotyrosine-mediated assembly of extended linker for the activation of T cells (LAT):growth factor receptor-bound protein 2 (Grb2):Son of Sevenless (SOS) networks, derived from the T-cell receptor signaling system, on supported membranes. Single-molecule dwell time distributions reveal two, well-differentiated kinetic species for both Grb2 and SOS on the LAT assemblies. The majority fraction of membrane-recruited Grb2 and SOS both exhibit fast kinetics and single exponential dwell time distributions, with average dwell times of hundreds of milliseconds. The minor fraction exhibits much slower kinetics, extending the dwell times to tens of seconds. Considering this result in the context of the multistep process by which the Ras GEF (guanine nucleotide exchange factor) activity of SOS is activated indicates that kinetic stabilization from the LAT assembly may be important. This kinetic proofreading effect would additionally serve as a stochastic noise filter by reducing the relative probability of spontaneous SOS activation in the absence of receptor triggering. In conclusion, the generality of receptor-mediated assembly suggests thatmore » such effects may play a role in multiple receptor proximal signaling processes.« less

Authors:
 [1];  [2];  [1];  [1];  [1];  [1];  [1];  [3];  [1]
  1. Univ. of California, Berkeley, CA (United States). Dept. of Chemistry
  2. Univ. of California, Berkeley, CA (United States). Howard Hughes Medical Inst.; Univ. of California, Berkeley, CA (United States). Dept. of Molecular and Cell Biology
  3. Univ. of California, Berkeley, CA (United States). Dept. of Chemistry; Univ. of California, Berkeley, CA (United States). Howard Hughes Medical Inst.; Univ. of California, Berkeley, CA (United States). Dept. of Molecular and Cell Biology
Publication Date:
Research Org.:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Org.:
USDOE; National Institutes of Health (NIH)
OSTI Identifier:
1379525
Grant/Contract Number:  
AC02-05CH11231; P01 AI091580
Resource Type:
Accepted Manuscript
Journal Name:
Proceedings of the National Academy of Sciences of the United States of America
Additional Journal Information:
Journal Volume: 113; Journal Issue: 29; Journal ID: ISSN 0027-8424
Publisher:
National Academy of Sciences, Washington, DC (United States)
Country of Publication:
United States
Language:
English
Subject:
60 APPLIED LIFE SCIENCES; 59 BASIC BIOLOGICAL SCIENCES; signal transduction; protein assembly; kinetic proofreading; membrane dwell time; single molecule

Citation Formats

Huang, William Y. C., Yan, Qingrong, Lin, Wan-Chen, Chung, Jean K., Hansen, Scott D., Christensen, Sune M., Tu, Hsiung-Lin, Kuriyan, John, and Groves, Jay T. Phosphotyrosine-mediated LAT assembly on membranes drives kinetic bifurcation in recruitment dynamics of the Ras activator SOS. United States: N. p., 2016. Web. doi:10.1073/pnas.1602602113.
Huang, William Y. C., Yan, Qingrong, Lin, Wan-Chen, Chung, Jean K., Hansen, Scott D., Christensen, Sune M., Tu, Hsiung-Lin, Kuriyan, John, & Groves, Jay T. Phosphotyrosine-mediated LAT assembly on membranes drives kinetic bifurcation in recruitment dynamics of the Ras activator SOS. United States. https://doi.org/10.1073/pnas.1602602113
Huang, William Y. C., Yan, Qingrong, Lin, Wan-Chen, Chung, Jean K., Hansen, Scott D., Christensen, Sune M., Tu, Hsiung-Lin, Kuriyan, John, and Groves, Jay T. Fri . "Phosphotyrosine-mediated LAT assembly on membranes drives kinetic bifurcation in recruitment dynamics of the Ras activator SOS". United States. https://doi.org/10.1073/pnas.1602602113. https://www.osti.gov/servlets/purl/1379525.
@article{osti_1379525,
title = {Phosphotyrosine-mediated LAT assembly on membranes drives kinetic bifurcation in recruitment dynamics of the Ras activator SOS},
author = {Huang, William Y. C. and Yan, Qingrong and Lin, Wan-Chen and Chung, Jean K. and Hansen, Scott D. and Christensen, Sune M. and Tu, Hsiung-Lin and Kuriyan, John and Groves, Jay T.},
abstractNote = {The assembly of cell surface receptors with downstream signaling molecules is a commonly occurring theme in multiple signaling systems. However, little is known about how these assemblies modulate reaction kinetics and the ultimate propagation of signals. Here, we reconstitute phosphotyrosine-mediated assembly of extended linker for the activation of T cells (LAT):growth factor receptor-bound protein 2 (Grb2):Son of Sevenless (SOS) networks, derived from the T-cell receptor signaling system, on supported membranes. Single-molecule dwell time distributions reveal two, well-differentiated kinetic species for both Grb2 and SOS on the LAT assemblies. The majority fraction of membrane-recruited Grb2 and SOS both exhibit fast kinetics and single exponential dwell time distributions, with average dwell times of hundreds of milliseconds. The minor fraction exhibits much slower kinetics, extending the dwell times to tens of seconds. Considering this result in the context of the multistep process by which the Ras GEF (guanine nucleotide exchange factor) activity of SOS is activated indicates that kinetic stabilization from the LAT assembly may be important. This kinetic proofreading effect would additionally serve as a stochastic noise filter by reducing the relative probability of spontaneous SOS activation in the absence of receptor triggering. In conclusion, the generality of receptor-mediated assembly suggests that such effects may play a role in multiple receptor proximal signaling processes.},
doi = {10.1073/pnas.1602602113},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
number = 29,
volume = 113,
place = {United States},
year = {Fri Jul 01 00:00:00 EDT 2016},
month = {Fri Jul 01 00:00:00 EDT 2016}
}

Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record

Citation Metrics:
Cited by: 70 works
Citation information provided by
Web of Science

Save / Share:

Works referenced in this record:

Phase transitions in the assembly of multivalent signalling proteins
journal, March 2012

  • Li, Pilong; Banjade, Sudeep; Cheng, Hui-Chun
  • Nature, Vol. 483, Issue 7389
  • DOI: 10.1038/nature10879

Eph Receptor Signaling and Ephrins
journal, September 2013

  • Lisabeth, E. M.; Falivelli, G.; Pasquale, E. B.
  • Cold Spring Harbor Perspectives in Biology, Vol. 5, Issue 9
  • DOI: 10.1101/cshperspect.a009159

The Grb2-mSos1 Complex Binds Phosphopeptides with Higher Affinity than Grb2
journal, November 1996

  • Chook, Yuh Min; Gish, Gerald D.; Kay, Cyril M.
  • Journal of Biological Chemistry, Vol. 271, Issue 48
  • DOI: 10.1074/jbc.271.48.30472

Digital Signaling and Hysteresis Characterize Ras Activation in Lymphoid Cells
journal, January 2009


The role of T cell receptor signaling thresholds in guiding T cell fate decisions
journal, April 2015


Monitoring the Waiting Time Sequence of Single Ras GTPase Activation Events Using Liposome Functionalized Zero-Mode Waveguides
journal, March 2016


Oligomerization of signaling complexes by the multipoint binding of GRB2 to both LAT and SOS1
journal, August 2006

  • Houtman, Jon C. D.; Yamaguchi, Hiroshi; Barda-Saad, Mira
  • Nature Structural & Molecular Biology, Vol. 13, Issue 9
  • DOI: 10.1038/nsmb1133

Restriction of Receptor Movement Alters Cellular Response: Physical Force Sensing by EphA2
journal, March 2010


Receptor Signaling Clusters in the Immune Synapse
journal, June 2012


Aggregation of Membrane Proteins by Cytosolic Cross-Linkers: Theory and Simulation of the LAT-Grb2-SOS1 System
journal, April 2009


Membrane-dependent signal integration by the Ras activator Son of sevenless
journal, May 2008

  • Gureasko, Jodi; Galush, William J.; Boykevisch, Sean
  • Nature Structural & Molecular Biology, Vol. 15, Issue 5
  • DOI: 10.1038/nsmb.1418

TCR and Lat are expressed on separate protein islands on T cell membranes and concatenate during activation
journal, December 2009

  • Lillemeier, Björn F.; Mörtelmaier, Manuel A.; Forstner, Martin B.
  • Nature Immunology, Vol. 11, Issue 1
  • DOI: 10.1038/ni.1832

Fiji: an open-source platform for biological-image analysis
journal, June 2012

  • Schindelin, Johannes; Arganda-Carreras, Ignacio; Frise, Erwin
  • Nature Methods, Vol. 9, Issue 7
  • DOI: 10.1038/nmeth.2019

Binding Specificity of Multiprotein Signaling Complexes Is Determined by Both Cooperative Interactions and Affinity Preferences
journal, April 2004

  • Houtman, Jon C. D.; Higashimoto, Yuichiro; Dimasi, Nazzareno
  • Biochemistry, Vol. 43, Issue 14
  • DOI: 10.1021/bi0357311

Kinetic Control of Histidine-Tagged Protein Surface Density on Supported Lipid Bilayers
journal, April 2008


Kinetic proofreading in T-cell receptor signal transduction.
journal, May 1995


Cell Signaling by Receptor Tyrosine Kinases
journal, October 2000


Spatial Organization of EphA2 at the Cell-Cell Interface Modulates Trans-Endocytosis of EphrinA1
journal, May 2014


The Ability of Sos1 to Oligomerize the Adaptor Protein LAT Is Separable from Its Guanine Nucleotide Exchange Activity in Vivo
journal, November 2013


Identification of the Minimal Tyrosine Residues Required for Linker for Activation of T Cell Function
journal, June 2001


Methods in Statistical Kinetics
book, January 2010


Ras activation by SOS: Allosteric regulation by altered fluctuation dynamics
journal, July 2014


Bayesian Detection of Intensity Changes in Single Molecule and Molecular Dynamics Trajectories
journal, January 2010

  • Ensign, Daniel L.; Pande, Vijay S.
  • The Journal of Physical Chemistry B, Vol. 114, Issue 1
  • DOI: 10.1021/jp906786b

H-Ras forms dimers on membrane surfaces via a protein-protein interface
journal, February 2014

  • Lin, W. -C.; Iversen, L.; Tu, H. -L.
  • Proceedings of the National Academy of Sciences, Vol. 111, Issue 8
  • DOI: 10.1073/pnas.1321155111

Dynamic multiple-target tracing to probe spatiotemporal cartography of cell membranes
journal, July 2008

  • Sergé, Arnauld; Bertaux, Nicolas; Rigneault, Hervé
  • Nature Methods, Vol. 5, Issue 8
  • DOI: 10.1038/nmeth.1233

Molecular mechanisms in signal transduction at the membrane
journal, May 2010

  • Groves, Jay T.; Kuriyan, John
  • Nature Structural & Molecular Biology, Vol. 17, Issue 6
  • DOI: 10.1038/nsmb.1844

Cell Signaling in Space and Time: Where Proteins Come Together and When They’re Apart
journal, November 2009


Size-Based Chromatography of Signaling Clusters in a Living Cell Membrane
journal, April 2014

  • Caculitan, Niña G.; Kai, Hiroyuki; Liu, Eulanca Y.
  • Nano Letters, Vol. 14, Issue 5
  • DOI: 10.1021/nl404514e

Fast rebinding increases dwell time of Src homology 2 (SH2)-containing proteins near the plasma membrane
journal, August 2012

  • Oh, D.; Ogiue-Ikeda, M.; Jadwin, J. A.
  • Proceedings of the National Academy of Sciences, Vol. 109, Issue 35
  • DOI: 10.1073/pnas.1203397109

Kinetic Proofreading: A New Mechanism for Reducing Errors in Biosynthetic Processes Requiring High Specificity
journal, October 1974


Minimal Requirement of Tyrosine Residues of Linker for Activation of T Cells in TCR Signaling and Thymocyte Development
journal, January 2003


On the Mechanism of Trolox as Antiblinking and Antibleaching Reagent
journal, April 2009

  • Cordes, Thorben; Vogelsang, Jan; Tinnefeld, Philip
  • Journal of the American Chemical Society, Vol. 131, Issue 14
  • DOI: 10.1021/ja809117z

Nanoscale Obstacle Arrays Frustrate Transport of EphA2–Ephrin-A1 Clusters in Cancer Cell Lines
journal, June 2013

  • Lohmüller, Theobald; Xu, Qian; Groves, Jay T.
  • Nano Letters, Vol. 13, Issue 7
  • DOI: 10.1021/nl400874v

Photobleaching kinetics of fluorescein in quantitative fluorescence microscopy
journal, June 1995


Single-Molecule Michaelis−Menten Equations
journal, October 2005

  • Kou, S. C.; Cherayil, Binny J.; Min, Wei
  • The Journal of Physical Chemistry B, Vol. 109, Issue 41
  • DOI: 10.1021/jp051490q

Concepts and consequences of Eph receptor clustering
journal, February 2012

  • Janes, Peter W.; Nievergall, Eva; Lackmann, Martin
  • Seminars in Cell & Developmental Biology, Vol. 23, Issue 1
  • DOI: 10.1016/j.semcdb.2012.01.001

Role of the histone domain in the autoinhibition and activation of the Ras activator Son of Sevenless
journal, February 2010

  • Gureasko, Jodi; Kuchment, Olga; Makino, Debora Lika
  • Proceedings of the National Academy of Sciences, Vol. 107, Issue 8
  • DOI: 10.1073/pnas.0913915107

Voltage-Gated Ion Channels
book, January 2008


Voltage-Gated Ion Channels
book, January 2014


The Grb2-mSos1 complex binds phosphopeptides with higher affinity than Grb2.
journal, February 1997


Voltage-gated ion channels
book, January 2011


Works referencing / citing this record:

Multicomponent Supported Membrane Microarray for Monitoring Spatially Resolved Cellular Signaling Reactions
journal, February 2018

  • Biswas, Kabir H.; Zhongwen, Chen; Dubey, Alok Kumar
  • Advanced Biosystems, Vol. 2, Issue 4
  • DOI: 10.1002/adbi.201800015

Integrin and cadherin clusters: A robust way to organize adhesions for cell mechanics
journal, December 2016


Regulatory mechanisms in T cell receptor signalling
journal, May 2018

  • Gaud, Guillaume; Lesourne, Renaud; Love, Paul E.
  • Nature Reviews Immunology, Vol. 18, Issue 8
  • DOI: 10.1038/s41577-018-0020-8

Understanding T cell signaling using membrane reconstitution
journal, August 2019


A molecular assembly phase transition and kinetic proofreading modulate Ras activation by SOS
journal, March 2019


Stoichiometry controls activity of phase-separated clusters of actin signaling proteins
journal, March 2019


Mapping the stochastic sequence of individual ligand-receptor binding events to cellular activation: T cells act on the rare events
journal, January 2019

  • Lin, Jenny J. Y.; Low-Nam, Shalini T.; Alfieri, Katherine N.
  • Science Signaling, Vol. 12, Issue 564
  • DOI: 10.1126/scisignal.aat8715

More from less – bottom-up reconstitution of cell biology
journal, February 2019

  • Ganzinger, Kristina A.; Schwille, Petra
  • Journal of Cell Science, Vol. 132, Issue 4
  • DOI: 10.1242/jcs.227488

Light-based tuning of ligand half-life supports kinetic proofreading model of T cell signaling
journal, April 2019


Kinetics of cytokine receptor trafficking determine signaling and functional selectivity
journal, November 2019

  • Martinez-Fabregas, Jonathan; Wilmes, Stephan; Wang, Luopin
  • eLife, Vol. 8
  • DOI: 10.7554/elife.49314

Multiple sources of signal amplification within the B cell Ras/MAPK pathway
journal, September 2018

  • McLaurin, Justin D.; Weiner, Orion D.
  • Molecular Biology of the Cell
  • DOI: 10.1101/415737

Kinetics of cytokine receptor trafficking determine signaling and functional selectivity
journal, November 2019

  • Martinez-Fabregas, Jonathan; Wilmes, Stephan; Wang, Luopin
  • eLife, Vol. 8
  • DOI: 10.7554/elife.49314