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Characterization and molecular simulation of lignin in Cyrene pretreatment of switchgrass
Abstract
Biomass-derived solvents have been proposed as a novel pathway in biorefining for the realization of biofuels and bioproducts derived from lignocellulosic biomass. Cyrene derived from cellulose has recently been shown to have a high potential as a green organic solvent for pretreating poplar biomass. However, due to its high dynamic viscosity nature, high Cyrene concentration could cause negative effects on the sugar release of the pretreated biomass as well as driving up the operational cost of the lignin recovery. In this study, we combine experimental and computational approaches to examine the impact of Cyrene pretreatment with reduced Cyrene concentration under mild conditions on switchgrass lignin. Our experimental studies indicated correlation between pretreatment condition and recovery and structure modification of lignin. Switchgrass lignin extracted by Cyrene pretreatment possessed high preservation of β-O-4 ether inter-unit linkage, which could provide versatility in the integration of downstream lignin valorization into the modern biorefinery industries. Molecular modeling examining the solvation of switchgrass lignin polymer and the disaggregation of low-molecular weight lignin aggregates under pretreatment conditions indicated that a preferential interaction exists between Cyrene and lignin, which likely drives lignin release, and that the disruption of inter-lignin contacts can be modulated as a non-monotonic function ofmore »
- Authors:
-
- University of Tennessee, Knoxville, TN (United States)
- University of Tennessee, Knoxville, TN (United States); Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
- Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
- Publication Date:
- Research Org.:
- Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Advanced Scientific Computing Research (ASCR)
- OSTI Identifier:
- 2267627
- Alternate Identifier(s):
- OSTI ID: 2202491
- Grant/Contract Number:
- AC05-00OR22725; ERCAP0025417
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Green Chemistry
- Additional Journal Information:
- Journal Volume: 26; Journal Issue: 6; Journal ID: ISSN 1463-9262
- Publisher:
- Royal Society of Chemistry
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 09 BIOMASS FUELS
Citation Formats
Wang, Yun-Yan, Wang, Yunxuan, Liang, Luna, Smith, Micholas Dean, Meng, Xianzhi, Pu, Yunqiao, Mazarei, Mitra, Agarwal, Rupesh, Rukmani, Shalini J., Davison, Brian H., and Ragauskas, Arthur J. Characterization and molecular simulation of lignin in Cyrene pretreatment of switchgrass. United States: N. p., 2023.
Web. doi:10.1039/d3gc02239k.
Wang, Yun-Yan, Wang, Yunxuan, Liang, Luna, Smith, Micholas Dean, Meng, Xianzhi, Pu, Yunqiao, Mazarei, Mitra, Agarwal, Rupesh, Rukmani, Shalini J., Davison, Brian H., & Ragauskas, Arthur J. Characterization and molecular simulation of lignin in Cyrene pretreatment of switchgrass. United States. https://doi.org/10.1039/d3gc02239k
Wang, Yun-Yan, Wang, Yunxuan, Liang, Luna, Smith, Micholas Dean, Meng, Xianzhi, Pu, Yunqiao, Mazarei, Mitra, Agarwal, Rupesh, Rukmani, Shalini J., Davison, Brian H., and Ragauskas, Arthur J. Wed .
"Characterization and molecular simulation of lignin in Cyrene pretreatment of switchgrass". United States. https://doi.org/10.1039/d3gc02239k.
@article{osti_2267627,
title = {Characterization and molecular simulation of lignin in Cyrene pretreatment of switchgrass},
author = {Wang, Yun-Yan and Wang, Yunxuan and Liang, Luna and Smith, Micholas Dean and Meng, Xianzhi and Pu, Yunqiao and Mazarei, Mitra and Agarwal, Rupesh and Rukmani, Shalini J. and Davison, Brian H. and Ragauskas, Arthur J.},
abstractNote = {Biomass-derived solvents have been proposed as a novel pathway in biorefining for the realization of biofuels and bioproducts derived from lignocellulosic biomass. Cyrene derived from cellulose has recently been shown to have a high potential as a green organic solvent for pretreating poplar biomass. However, due to its high dynamic viscosity nature, high Cyrene concentration could cause negative effects on the sugar release of the pretreated biomass as well as driving up the operational cost of the lignin recovery. In this study, we combine experimental and computational approaches to examine the impact of Cyrene pretreatment with reduced Cyrene concentration under mild conditions on switchgrass lignin. Our experimental studies indicated correlation between pretreatment condition and recovery and structure modification of lignin. Switchgrass lignin extracted by Cyrene pretreatment possessed high preservation of β-O-4 ether inter-unit linkage, which could provide versatility in the integration of downstream lignin valorization into the modern biorefinery industries. Molecular modeling examining the solvation of switchgrass lignin polymer and the disaggregation of low-molecular weight lignin aggregates under pretreatment conditions indicated that a preferential interaction exists between Cyrene and lignin, which likely drives lignin release, and that the disruption of inter-lignin contacts can be modulated as a non-monotonic function of Cyrene : water ratio. Further, while Cyrene–lignin interactions permit the solubilization of lignin, simulations with proxy reactive-species reveal that changes to the diffusion of these reactive proxies and their localization near linkage sites under Cyrene conditions may inhibit chemical processes. In conclusion, the results indicated that loss of pretreatment efficacy caused by low Cyrene concentration could be compensated by prolonged pretreatment time and high catalyst dosage.},
doi = {10.1039/d3gc02239k},
journal = {Green Chemistry},
number = 6,
volume = 26,
place = {United States},
year = {Wed Oct 04 00:00:00 EDT 2023},
month = {Wed Oct 04 00:00:00 EDT 2023}
}
Works referenced in this record:
A critical review on the analysis of lignin carbohydrate bonds
journal, January 2019
- Giummarella, Nicola; Pu, Yunqiao; Ragauskas, Arthur J.
- Green Chemistry, Vol. 21, Issue 7
A Mechanistic Investigation of Acid-Catalyzed Cleavage of Aryl-Ether Linkages: Implications for Lignin Depolymerization in Acidic Environments
journal, November 2013
- Sturgeon, Matthew R.; Kim, Seonah; Lawrence, Kelsey
- ACS Sustainable Chemistry & Engineering, Vol. 2, Issue 3, p. 472-485
Dihydrolevoglucosenone (Cyrene™) as a versatile biobased solvent for lignin fractionation, processing, and chemistry
journal, January 2022
- Duval, Antoine; Avérous, Luc
- Green Chemistry, Vol. 24, Issue 1
Guidelines for performing lignin-first biorefining
journal, January 2021
- Abu-Omar, Mahdi M.; Barta, Katalin; Beckham, Gregg T.
- Energy & Environmental Science, Vol. 14, Issue 1
Cyrene™ is a green alternative to DMSO as a solvent for antibacterial drug discovery against ESKAPE pathogens
journal, January 2020
- Camp, Jason E.; Nyamini, Simbarashe B.; Scott, Fraser J.
- RSC Medicinal Chemistry, Vol. 11, Issue 1
Chemical and Morphological Structure of Transgenic Switchgrass Organosolv Lignin Extracted by Ethanol, Tetrahydrofuran, and γ-Valerolactone Pretreatments
journal, July 2022
- Liang, Luna; Wang, Yun-Yan; Bhagia, Samarthya
- ACS Sustainable Chemistry & Engineering, Vol. 10, Issue 28
Assessing the molecular structure basis for biomass recalcitrance during dilute acid and hydrothermal pretreatments
journal, January 2013
- Pu, Yunqiao; Hu, Fan; Huang, Fang
- Biotechnology for Biofuels, Vol. 6, Issue 1
Canonical sampling through velocity rescaling
journal, January 2007
- Bussi, Giovanni; Donadio, Davide; Parrinello, Michele
- The Journal of Chemical Physics, Vol. 126, Issue 1
Switchgrass as an energy crop for biofuel production: A review of its ligno-cellulosic chemical properties
journal, January 2010
- David, Kasi; Ragauskas, Arthur J.
- Energy & Environmental Science, Vol. 3, Issue 9
Differences in the content, composition and structure of the lignins from rind and pith of papyrus (Cyperus papyrus L.) culms
journal, December 2021
- Rosado, Mario J.; Bausch, Florian; Rencoret, Jorge
- Industrial Crops and Products, Vol. 174
Cosolvent pretreatment in cellulosic biofuel production: effect of tetrahydrofuran-water on lignin structure and dynamics
journal, January 2016
- Smith, Micholas Dean; Mostofian, Barmak; Cheng, Xiaolin
- Green Chemistry, Vol. 18, Issue 5
Fast Fractionation of Technical Lignins by Organic Cosolvents
journal, March 2018
- Wang, Yun-Yan; Li, Mi; Wyman, Charles E.
- ACS Sustainable Chemistry & Engineering, Vol. 6, Issue 5
Molecular Lignin Solubility and Structure in Organic Solvents
journal, November 2020
- Vermaas, Josh V.; Crowley, Michael F.; Beckham, Gregg T.
- ACS Sustainable Chemistry & Engineering, Vol. 8, Issue 48
Molecular dynamics with coupling to an external bath
journal, October 1984
- Berendsen, H. J. C.; Postma, J. P. M.; van Gunsteren, W. F.
- The Journal of Chemical Physics, Vol. 81, Issue 8
Determination of hydroxyl groups in biorefinery resources via quantitative 31P NMR spectroscopy
journal, August 2019
- Meng, Xianzhi; Crestini, Claudia; Ben, Haoxi
- Nature Protocols, Vol. 14, Issue 9
Facile fractionation of lignocelluloses by biomass-derived deep eutectic solvent (DES) pretreatment for cellulose enzymatic hydrolysis and lignin valorization
journal, January 2019
- Shen, Xiao-Jun; Wen, Jia-Long; Mei, Qing-Qing
- Green Chemistry, Vol. 21, Issue 2
Effect of in Vivo Deuteration on Structure of Switchgrass Lignin
journal, August 2017
- Meng, Xianzhi; Evans, Barbara R.; Yoo, Chang Geun
- ACS Sustainable Chemistry & Engineering, Vol. 5, Issue 9
Dihydrolevoglucosenone (Cyrene™) as a bio-renewable solvent for Cu(0)wire-mediated reversible deactivation radical polymerization (RDRP) without external deoxygenation
journal, January 2020
- Marathianos, Arkadios; Liarou, Evelina; Hancox, Ellis
- Green Chemistry, Vol. 22, Issue 17
Reductive lignocellulose fractionation into soluble lignin-derived phenolic monomers and dimers and processable carbohydrate pulps
journal, January 2015
- Van den Bosch, S.; Schutyser, W.; Vanholme, R.
- Energy & Environmental Science, Vol. 8, Issue 6
Development and field assessment of transgenic hybrid switchgrass for improved biofuel traits
journal, January 2020
- Alexander, Lisa; Hatcher, Catherine; Mazarei, Mitra
- Euphytica, Vol. 216, Issue 2
A biomass pretreatment using cellulose-derived solvent Cyrene
journal, January 2020
- Meng, Xianzhi; Pu, Yunqiao; Li, Mi
- Green Chemistry, Vol. 22, Issue 9
Biphasic 2-methyltetrahydrofuran/oxalic acid/water pretreatment to enhance cellulose enzymatic hydrolysis and lignin valorization
journal, November 2017
- Li, Shu-Xian; Li, Ming-Fei; Bian, Jing
- Bioresource Technology, Vol. 243
Development of pharmaceutically relevant bio-based intermediates though aldol condensation and Claisen–Schmidt reactions of dihydrolevoglucosenone (Cyrene®)
journal, January 2018
- Hughes, Liam; McElroy, Con R.; Whitwood, Adrian C.
- Green Chemistry, Vol. 20, Issue 19
P-LINCS: A Parallel Linear Constraint Solver for Molecular Simulation
journal, December 2007
- Hess, Berk
- Journal of Chemical Theory and Computation, Vol. 4, Issue 1
Plant Biomass Characterization: Application of Solution- and Solid-State NMR Spectroscopy
book, April 2013
- Pu, Yunqiao; Hallac, Bassem; Ragauskas, Arthur J.
- Aqueous Pretreatment of Plant Biomass for Biological and Chemical Conversion to Fuels and Chemicals
A mild biomass pretreatment using γ-valerolactone for concentrated sugar production
journal, January 2016
- Shuai, Li; Questell-Santiago, Ydna M.; Luterbacher, Jeremy S.
- Green Chemistry, Vol. 18, Issue 4
Comparison of dilute acid and ionic liquid pretreatment of switchgrass: Biomass recalcitrance, delignification and enzymatic saccharification
journal, July 2010
- Li, Chenlin; Knierim, Bernhard; Manisseri, Chithra
- Bioresource Technology, Vol. 101, Issue 13
The Perspective of Cooperative Hydrotropy on the Solubility in Aqueous Solutions of Cyrene
journal, September 2020
- Abranches, Dinis O.; Benfica, Jordana; Shimizu, Seishi
- Industrial & Engineering Chemistry Research, Vol. 59, Issue 41
Polymorphic transitions in single crystals: A new molecular dynamics method
journal, December 1981
- Parrinello, M.; Rahman, A.
- Journal of Applied Physics, Vol. 52, Issue 12
Putative Seedling Ferulate Ester () Maize Mutant: Morphology, Biomass Yield, and Stover Cell Wall Composition and Rumen Degradability
journal, January 2010
- Jung, H. G.; Phillips, R. L.
- Crop Science, Vol. 50, Issue 1
The structure, function, and biosynthesis of plant cell wall pectic polysaccharides
journal, September 2009
- Caffall, Kerry Hosmer; Mohnen, Debra
- Carbohydrate Research, Vol. 344, Issue 14
Dihydrolevoglucosenone (Cyrene) as a bio-based alternative for dipolar aprotic solvents
journal, January 2014
- Sherwood, James; De bruyn, Mario; Constantinou, Andri
- Chem. Commun., Vol. 50, Issue 68
GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers
journal, September 2015
- Abraham, Mark James; Murtola, Teemu; Schulz, Roland
- SoftwareX, Vol. 1-2
The Path Forward for Biofuels and Biomaterials
journal, January 2006
- Ragauskas, Arthur J.; Williams, Charlotte K.; Davison, Brian H.
- Science, Vol. 311, Issue 5760, p. 484-489
Lignin-first biomass fractionation: the advent of active stabilisation strategies
journal, January 2017
- Renders, T.; Van den Bosch, S.; Koelewijn, S. -F.
- Energy & Environmental Science, Vol. 10, Issue 7
Recent Trends in the Pretreatment of Lignocellulosic Biomass for Value-Added Products
journal, December 2018
- Baruah, Julie; Nath, Bikash Kar; Sharma, Ritika
- Frontiers in Energy Research, Vol. 6
Cyrene: a bio-based solvent for the Mizoroki–Heck reaction of aryl iodides
journal, January 2023
- Stini, Naya A.; Gkizis, Petros L.; Kokotos, Christoforos G.
- Organic & Biomolecular Chemistry, Vol. 21, Issue 2
Multiscale Molecular Simulation Strategies for Understanding the Delignification Mechanism of Biomass in Cyrene
journal, August 2022
- Mohan, Mood; L. Sale, Kenneth; Kalb, Roland S.
- ACS Sustainable Chemistry & Engineering, Vol. 10, Issue 33
Enhanced sampling simulation analysis of the structure of lignin in the THF–water miscibility gap
journal, January 2016
- Smith, Micholas Dean; Petridis, Loukas; Cheng, Xiaolin
- Physical Chemistry Chemical Physics, Vol. 18, Issue 9
Formaldehyde stabilization facilitates lignin monomer production during biomass depolymerization
journal, October 2016
- Shuai, Li; Amiri, Masoud Talebi; Questell-Santiago, Ydna M.
- Science, Vol. 354, Issue 6310
A molecular mechanics force field for lignin
journal, February 2009
- Petridis, Loukas; Smith, Jeremy C.
- Journal of Computational Chemistry, Vol. 30, Issue 3
Effects of CELF Pretreatment Severity on Lignin Structure and the Lignin-Based Polyurethane Properties
journal, July 2020
- Wang, Yun-Yan; Sengupta, Priya; Scheidemantle, Brent
- Frontiers in Energy Research, Vol. 8
Study of traits and recalcitrance reduction of field-grown COMT down-regulated switchgrass
journal, January 2017
- Li, Mi; Pu, Yunqiao; Yoo, Chang Geun
- Biotechnology for Biofuels, Vol. 10, Issue 1
Recent Advances in Enzymatic Conversion of Lignin to Value Added Products
book, December 2020
- Nguyen, Giang-Son; Lewin, Anna Sofia; Di Bartolomeo, Francesca
- Enzymes for Solving Humankind's Problems
Polymer Chemistry Applications of Cyrene and its Derivative Cygnet 0.0 as Safer Replacements for Polar Aprotic Solvents
journal, July 2021
- Milescu, Roxana A.; Zhenova, Anna; Vastano, Marco
- ChemSusChem, Vol. 14, Issue 16
Lignins: Natural polymers from oxidative coupling of 4-hydroxyphenyl- propanoids
journal, January 2004
- Ralph, John; Lundquist, Knut; Brunow, Gösta
- Phytochemistry Reviews, Vol. 3, Issue 1-2, p. 29-60