Relatively rare root endophytic bacteria drive plant resource allocation patterns and tissue nutrient concentration in unpredictable ways
Abstract
Plant endophytic bacterial strains can influence plant traits such as leaf area and root length. Yet, the influence of more complex bacterial communities in regulating overall plant phenotype is less explored. Here, in two complementary experiments, we tested whether we can predict plant phenotype response to changes in microbial community composition. In the first study, we inoculated a single genotype of Populus deltoides with individual root endophytic bacteria and measured plant phenotype. Next, data from this single inoculation were used to predict phenotypic traits after mixed three-strain community inoculations, which we tested in the second experiment. By itself, each bacterial endophyte significantly but weakly altered plant phenotype relative to noninoculated plants. In a mixture, bacterial strain Burkholderia BT03, constituted at least 98% of community relative abundance. Yet, plant resource allocation and tissue nutrient concentrations were disproportionately influenced by Pseudomonas sp. GM17, GM30, and GM41. We found a 10% increase in leaf mass fraction and an 11% decrease in root mass fraction when replacing Pseudomonas GM17 with GM41 in communities containing both Pseudomonas GM30 and Burkholderia BT03. Our results indicate that interactions among endophytic bacteria may drive plant phenotype over the contribution of each strain individually. Additionally, we have shown thatmore »
- Authors:
-
- Univ. of Tennessee, Knoxville, TN (United States); Univ. of Minnesota, Minneapolis, MN (United States)
- Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
- Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Johns Hopkins Univ., Baltimore, MD (United States)
- Univ. of Tennessee, Knoxville, TN (United States); Univ. of Vermont, Burlington, VT (United States)
- Publication Date:
- Research Org.:
- Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Biological and Environmental Research (BER)
- OSTI Identifier:
- 1606051
- Alternate Identifier(s):
- OSTI ID: 1572124
- Grant/Contract Number:
- AC05-00OR22725; AC05‐00OR22725
- Resource Type:
- Accepted Manuscript
- Journal Name:
- American Journal of Botany
- Additional Journal Information:
- Journal Volume: 106; Journal Issue: 11; Journal ID: ISSN 0002-9122
- Publisher:
- Wiley - Botanical Society of America
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES; allocation; bacterial endophytes; Burkholderia; constructed communities; mass–ratio hypothesis; Populus deltoides; Pseudomonas plant traits; Salicaceae
Citation Formats
Henning, Jeremiah A., Weston, David J., Pelletier, Dale A., Timm, Collin M., Jawdy, Sara S., and Classen, Aimée T. Relatively rare root endophytic bacteria drive plant resource allocation patterns and tissue nutrient concentration in unpredictable ways. United States: N. p., 2019.
Web. doi:10.1002/ajb2.1373.
Henning, Jeremiah A., Weston, David J., Pelletier, Dale A., Timm, Collin M., Jawdy, Sara S., & Classen, Aimée T. Relatively rare root endophytic bacteria drive plant resource allocation patterns and tissue nutrient concentration in unpredictable ways. United States. https://doi.org/10.1002/ajb2.1373
Henning, Jeremiah A., Weston, David J., Pelletier, Dale A., Timm, Collin M., Jawdy, Sara S., and Classen, Aimée T. Mon .
"Relatively rare root endophytic bacteria drive plant resource allocation patterns and tissue nutrient concentration in unpredictable ways". United States. https://doi.org/10.1002/ajb2.1373. https://www.osti.gov/servlets/purl/1606051.
@article{osti_1606051,
title = {Relatively rare root endophytic bacteria drive plant resource allocation patterns and tissue nutrient concentration in unpredictable ways},
author = {Henning, Jeremiah A. and Weston, David J. and Pelletier, Dale A. and Timm, Collin M. and Jawdy, Sara S. and Classen, Aimée T.},
abstractNote = {Plant endophytic bacterial strains can influence plant traits such as leaf area and root length. Yet, the influence of more complex bacterial communities in regulating overall plant phenotype is less explored. Here, in two complementary experiments, we tested whether we can predict plant phenotype response to changes in microbial community composition. In the first study, we inoculated a single genotype of Populus deltoides with individual root endophytic bacteria and measured plant phenotype. Next, data from this single inoculation were used to predict phenotypic traits after mixed three-strain community inoculations, which we tested in the second experiment. By itself, each bacterial endophyte significantly but weakly altered plant phenotype relative to noninoculated plants. In a mixture, bacterial strain Burkholderia BT03, constituted at least 98% of community relative abundance. Yet, plant resource allocation and tissue nutrient concentrations were disproportionately influenced by Pseudomonas sp. GM17, GM30, and GM41. We found a 10% increase in leaf mass fraction and an 11% decrease in root mass fraction when replacing Pseudomonas GM17 with GM41 in communities containing both Pseudomonas GM30 and Burkholderia BT03. Our results indicate that interactions among endophytic bacteria may drive plant phenotype over the contribution of each strain individually. Additionally, we have shown that low-abundance strains contribute to plant phenotype challenging the assumption that the dominant strains will drive plant function.},
doi = {10.1002/ajb2.1373},
journal = {American Journal of Botany},
number = 11,
volume = 106,
place = {United States},
year = {Mon Oct 28 00:00:00 EDT 2019},
month = {Mon Oct 28 00:00:00 EDT 2019}
}
Web of Science
Figures / Tables:
Works referenced in this record:
Bacterial volatiles promote growth in Arabidopsis
journal, April 2003
- Ryu, C. -M.; Farag, M. A.; Hu, C. -H.
- Proceedings of the National Academy of Sciences, Vol. 100, Issue 8
Root bacterial endophytes alter plant phenotype, but not physiology
journal, January 2016
- Henning, Jeremiah A.; Weston, David J.; Pelletier, Dale A.
- PeerJ, Vol. 4
The Transcriptome of Rhizobacteria-Induced Systemic Resistance in Arabidopsis
journal, August 2004
- Verhagen, Bas W. M.; Glazebrook, Jane; Zhu, Tong
- Molecular Plant-Microbe Interactions, Vol. 17, Issue 8
Design of synthetic bacterial communities for predictable plant phenotypes
journal, February 2018
- Herrera Paredes, Sur; Gao, Tianxiang; Law, Theresa F.
- PLOS Biology, Vol. 16, Issue 2
The Plant-Growth-Promoting Rhizobacterium Paenibacillus polymyxa Induces Changes in Arabidopsis thaliana Gene Expression: A Possible Connection Between Biotic and Abiotic Stress Responses
journal, November 1999
- Timmusk, Salme; Wagner, E. Gerhart H.
- Molecular Plant-Microbe Interactions, Vol. 12, Issue 11
Distinct Microbial Communities within the Endosphere and Rhizosphere of Populus deltoides Roots across Contrasting Soil Types
journal, July 2011
- Gottel, Neil R.; Castro, Hector F.; Kerley, Marilyn
- Applied and Environmental Microbiology, Vol. 77, Issue 17
Ecology and exploration of the rare biosphere
journal, March 2015
- Lynch, Michael D. J.; Neufeld, Josh D.
- Nature Reviews Microbiology, Vol. 13, Issue 4
Conditionally Rare Taxa Disproportionately Contribute to Temporal Changes in Microbial Diversity
journal, July 2014
- Shade, A.; Jones, S. E.; Caporaso, J. G.
- mBio, Vol. 5, Issue 4
Microbial diversity in the deep sea and the underexplored "rare biosphere"
journal, July 2006
- Sogin, M. L.; Morrison, H. G.; Huber, J. A.
- Proceedings of the National Academy of Sciences, Vol. 103, Issue 32
Rare symbionts may contribute to the resilience of coral–algal assemblages
journal, December 2017
- Ziegler, Maren; Eguíluz, Víctor M.; Duarte, Carlos M.
- The ISME Journal, Vol. 12, Issue 1
Biotechnological potential of plant-associated endophytic fungi: hope versus hype
journal, June 2014
- Kusari, Souvik; Singh, Satpal; Jayabaskaran, Chelliah
- Trends in Biotechnology, Vol. 32, Issue 6
A Multiscale Approach to Plant Disease Using the Metacommunity Concept
journal, August 2016
- Borer, Elizabeth T.; Laine, Anna-Liisa; Seabloom, Eric W.
- Annual Review of Phytopathology, Vol. 54, Issue 1
Microbial diversity and soil functions
journal, December 2003
- Nannipieri, P.; Ascher, J.; Ceccherini, M. T.
- European Journal of Soil Science, Vol. 54, Issue 4
The ade4 Package: Implementing the Duality Diagram for Ecologists
journal, January 2007
- Dray, Stéphane; Dufour, Anne-Béatrice
- Journal of Statistical Software, Vol. 22, Issue 4
Linking metacommunity theory and symbiont evolutionary ecology
journal, June 2012
- Mihaljevic, Joseph R.
- Trends in Ecology & Evolution, Vol. 27, Issue 6
Do subordinate species punch above their weight? Evidence from above- and below-ground
journal, March 2014
- Mariotte, Pierre
- New Phytologist, Vol. 203, Issue 1
What is microbial community ecology?
journal, August 2009
- Konopka, Allan
- The ISME Journal, Vol. 3, Issue 11
Microbial diversity determines the invasion of soil by a bacterial pathogen
journal, January 2012
- van Elsas, J. D.; Chiurazzi, M.; Mallon, C. A.
- Proceedings of the National Academy of Sciences, Vol. 109, Issue 4
Microbe–microbe interactions determine oomycete and fungal host colonization
journal, August 2014
- Kemen, Eric
- Current Opinion in Plant Biology, Vol. 20
Passage through the mammalian gut triggers a phenotypic switch that promotes Candida albicans commensalism
journal, July 2013
- Pande, Kalyan; Chen, Changbin; Noble, Suzanne M.
- Nature Genetics, Vol. 45, Issue 9
Iron acquisition and its control in pseudomonas aeruginosa many roads lead to rome
journal, January 2003
- Poole, Keith
- Frontiers in Bioscience, Vol. 8, Issue 4
Host plant secondary metabolite profiling shows a complex, strain-dependent response of maize to plant growth-promoting rhizobacteria of the genus Azospirillum
journal, October 2010
- Walker, Vincent; Bertrand, Cédric; Bellvert, Floriant
- New Phytologist, Vol. 189, Issue 2
From Animalcules to an Ecosystem: Application of Ecological Concepts to the Human Microbiome
journal, December 2012
- Fierer, Noah; Ferrenberg, Scott; Flores, Gilberto E.
- Annual Review of Ecology, Evolution, and Systematics, Vol. 43, Issue 1
Two Poplar-Associated Bacterial Isolates Induce Additive Favorable Responses in a Constructed Plant-Microbiome System
journal, April 2016
- Timm, Collin M.; Pelletier, Dale A.; Jawdy, Sara S.
- Frontiers in Plant Science, Vol. 7
Microbial Diversity and Structure Are Drivers of the Biological Barrier Effect against Listeria monocytogenes in Soil
journal, October 2013
- Vivant, Anne-Laure; Garmyn, Dominique; Maron, Pierre-Alain
- PLoS ONE, Vol. 8, Issue 10
Benefits of plant diversity to ecosystems: immediate, filter and founder effects
journal, December 1998
- Grime, J. P.
- Journal of Ecology, Vol. 86, Issue 6
Rapid responses of soil microorganisms improve plant fitness in novel environments
journal, August 2012
- Lau, J. A.; Lennon, J. T.
- Proceedings of the National Academy of Sciences, Vol. 109, Issue 35
New handbook for standardised measurement of plant functional traits worldwide
journal, January 2013
- Pérez-Harguindeguy, N.; Díaz, S.; Garnier, E.
- Australian Journal of Botany, Vol. 61, Issue 3
The Application of Ecological Theory Toward an Understanding of the Human Microbiome
journal, June 2012
- Costello, E. K.; Stagaman, K.; Dethlefsen, L.
- Science, Vol. 336, Issue 6086
Applying trait-based models to achieve functional targets for theory-driven ecological restoration
journal, April 2014
- Laughlin, Daniel C.
- Ecology Letters, Vol. 17, Issue 7
The role of Equisetum in nutrient cycling in an Alaskan shrub wetland
journal, December 2000
- Marsh, Anne S.; Arnone, John A.; Bormann, Bernard T.
- Journal of Ecology, Vol. 88, Issue 6
The EXS Domain of PHO1 Participates in the Response of Shoots to Phosphate Deficiency via a Root-to-Shoot Signal
journal, November 2015
- Wege, Stefanie; Khan, Ghazanfar Abbas; Jung, Ji-Yul
- Plant Physiology, Vol. 170, Issue 1
Punching above their weight: low-biomass non-native plant species alter soil properties during primary succession
journal, July 2009
- Peltzer, Duane A.; Bellingham, Peter J.; Kurokawa, Hiroko
- Oikos, Vol. 118, Issue 7
Context dependency and saturating effects of loss of rare soil microbes on plant productivity
journal, June 2015
- Hol, W. H. Gera; de Boer, Wietse; de Hollander, Mattias
- Frontiers in Plant Science, Vol. 6
Pseudomonas fluorescens Induces Strain-Dependent and Strain-Independent Host Plant Responses in Defense Networks, Primary Metabolism, Photosynthesis, and Fitness
journal, June 2012
- Weston, David J.; Pelletier, Dale A.; Morrell-Falvey, Jennifer L.
- Molecular Plant-Microbe Interactions, Vol. 25, Issue 6
Applying Community Structure Analysis to Ecosystem Function: Examples from Pollination and Carbon Storage
journal, February 2005
- Balvanera, Patricia; Kremen, Claire; Martínez-Ramos, Miguel
- Ecological Applications, Vol. 15, Issue 1
Effects of abundant white-tailed deer on vegetation, animals, mycorrhizal fungi, and soils
journal, May 2014
- Shelton, Angela L.; Henning, Jeremiah A.; Schultz, Peggy
- Forest Ecology and Management, Vol. 320
It Takes a Village: Ecological and Fitness Impacts of Multipartite Mutualism
journal, September 2013
- Hussa, Elizabeth A.; Goodrich-Blair, Heidi
- Annual Review of Microbiology, Vol. 67, Issue 1
Species richness-decomposition relationships depend on species dominance: Biodiversity and dominance in ecosystems
journal, April 2004
- Dangles, Olivier; Malmqvist, Björn
- Ecology Letters, Vol. 7, Issue 5
Competition, Not Cooperation, Dominates Interactions among Culturable Microbial Species
journal, October 2012
- Foster, Kevin R.; Bell, Thomas
- Current Biology, Vol. 22, Issue 19
Defining the core Arabidopsis thaliana root microbiome
journal, August 2012
- Lundberg, Derek S.; Lebeis, Sarah L.; Paredes, Sur Herrera
- Nature, Vol. 488, Issue 7409
Methods for unveiling cryptic microbial partnerships in nature
journal, June 2009
- Orphan, Victoria J.
- Current Opinion in Microbiology, Vol. 12, Issue 3
Role of Pseudomonas putida Indoleacetic Acid in Development of the Host Plant Root System
journal, August 2002
- Patten, C. L.; Glick, B. R.
- Applied and Environmental Microbiology, Vol. 68, Issue 8
In vitro suppression of fungi caused by combinations of apparently non-antagonistic soil bacteria: Suppression of fungi by non-antagonistic soil bacteria
journal, January 2007
- De Boer, Wietse; Wagenaar, Anne-Marieke; Klein Gunnewiek, Paulien J. A.
- FEMS Microbiology Ecology, Vol. 59, Issue 1
Microbiomes as Metacommunities: Understanding Host-Associated Microbes through Metacommunity Ecology
journal, December 2018
- Miller, Elizabeth Theresa; Svanbäck, Richard; Bohannan, Brendan J. M.
- Trends in Ecology & Evolution, Vol. 33, Issue 12
A wet oxidation procedure suitable for the determination of nitrogen and mineral nutrients in biological material
journal, January 1975
- Parkinson, J. A.; Allen, S. E.
- Communications in Soil Science and Plant Analysis, Vol. 6, Issue 1
Unraveling Root Developmental Programs Initiated by Beneficial Pseudomonas spp. Bacteria
journal, March 2013
- Zamioudis, Christos; Mastranesti, Parthena; Dhonukshe, Pankaj
- Plant Physiology, Vol. 162, Issue 1
Rare Species Support Vulnerable Functions in High-Diversity Ecosystems
journal, May 2013
- Mouillot, David; Bellwood, David R.; Baraloto, Christopher
- PLoS Biology, Vol. 11, Issue 5
The community ecology of pathogens: coinfection, coexistence and community composition
journal, March 2015
- Seabloom, Eric W.; Borer, Elizabeth T.; Gross, Kevin
- Ecology Letters, Vol. 18, Issue 4
Realistic Species Losses Disproportionately Reduce Grassland Resistance to Biological Invaders
journal, November 2004
- Zavaleta, E. S.
- Science, Vol. 306, Issue 5699
Unraveling the ties between irritable bowel syndrome and intestinal microbiota
journal, January 2014
- Hong, Sung Noh
- World Journal of Gastroenterology, Vol. 20, Issue 10
Probabilistic Invasion Underlies Natural Gut Microbiome Stability
journal, July 2017
- Obadia, Benjamin; Güvener, Z. T.; Zhang, Vivian
- Current Biology, Vol. 27, Issue 13
Fitting Linear Mixed-Effects Models Using lme4
journal, January 2015
- Bates, Douglas; Mächler, Martin; Bolker, Ben
- Journal of Statistical Software, Vol. 67, Issue 1
Global Patterns of Mammalian Diversity, Endemism, and Endangerment
journal, June 1995
- Ceballos, Gerardo; Brown, James H.
- Conservation Biology, Vol. 9, Issue 3
Mitigating climate change through managing constructed-microbial communities in agriculture
journal, January 2016
- Hamilton, Cyd E.; Bever, James D.; Labbé, Jessy
- Agriculture, Ecosystems & Environment, Vol. 216
Individual Members of the Microbiota Disproportionately Modulate Host Innate Immune Responses
journal, November 2015
- Rolig, Annah S.; Parthasarathy, Raghuveer; Burns, Adam R.
- Cell Host & Microbe, Vol. 18, Issue 5
Elucidating Duramycin’s Bacterial Selectivity and Mode of Action on the Bacterial Cell Envelope
journal, February 2018
- Hasim, Sahar; Allison, David P.; Mendez, Berlin
- Frontiers in Microbiology, Vol. 9
Biological nitrogen fixation and phosphate solubilization by bacteria isolated from tropical soils
journal, March 2012
- Marciano Marra, Leandro; Fonsêca Sousa Soares, Cláudio Roberto; de Oliveira, Silvia Maria
- Plant and Soil, Vol. 357, Issue 1-2
lmerTest Package: Tests in Linear Mixed Effects Models
journal, January 2017
- Kuznetsova, Alexandra; Brockhoff, Per B.; Christensen, Rune H. B.
- Journal of Statistical Software, Vol. 82, Issue 13
Competition, Disturbance, and Community Organization: The Provision and Subsequent Utilization of Space in a Rocky Intertidal Community
journal, October 1971
- Dayton, Paul K.
- Ecological Monographs, Vol. 41, Issue 4
The gut microbiota of siblings offers insights into microbial pathogenesis of inflammatory bowel disease
journal, January 2017
- Hedin, Charlotte R.; van der Gast, Christopher J.; Stagg, Andrew J.
- Gut Microbes, Vol. 8, Issue 4
Reduction of rare soil microbes modifies plant-herbivore interactions
journal, March 2010
- Hol, W. H. Gera; de Boer, Wietse; Termorshuizen, Aad J.
- Ecology Letters, Vol. 13, Issue 3
From Structure to Function: the Ecology of Host-Associated Microbial Communities
journal, August 2010
- Robinson, C. J.; Bohannan, B. J. M.; Young, V. B.
- Microbiology and Molecular Biology Reviews, Vol. 74, Issue 3
Twenty-One Genome Sequences from Pseudomonas Species and 19 Genome Sequences from Diverse Bacteria Isolated from the Rhizosphere and Endosphere of Populus deltoides
journal, October 2012
- Brown, S. D.; Utturkar, S. M.; Klingeman, D. M.
- Journal of Bacteriology, Vol. 194, Issue 21
Where less may be more: how the rare biosphere pulls ecosystems strings
journal, January 2017
- Jousset, Alexandre; Bienhold, Christina; Chatzinotas, Antonis
- The ISME Journal, Vol. 11, Issue 4
Microbiomes, Community Ecology, and the Comparative Method
journal, May 2019
- Hird, Sarah M.
- mSystems, Vol. 4, Issue 3
Diversity of Pseudomonas Genomes, Including Populus-Associated Isolates, as Revealed by Comparative Genome Analysis
journal, October 2015
- Jun, Se-Ran; Wassenaar, Trudy M.; Nookaew, Intawat
- Applied and Environmental Microbiology, Vol. 82, Issue 1
Disentangling community functional components in a litter-macrodetritivore model system reveals the predominance of the mass ratio hypothesis
journal, January 2014
- Bílá, Karolína; Moretti, Marco; de Bello, Francesco
- Ecology and Evolution, Vol. 4, Issue 4
A Revised Medium for Rapid Growth and Bio Assays with Tobacco Tissue Cultures
journal, July 1962
- Murashige, Toshio; Skoog, Folke
- Physiologia Plantarum, Vol. 15, Issue 3, p. 473-497
Niche and host-associated functional signatures of the root surface microbiome
journal, September 2014
- Ofek-Lalzar, Maya; Sela, Noa; Goldman-Voronov, Milana
- Nature Communications, Vol. 5, Issue 1
Extinction order and altered community structure rapidly disrupt ecosystem functioning: Altered community structure disrupts function
journal, April 2005
- Larsen, Trond H.; Williams, Neal M.; Kremen, Claire
- Ecology Letters, Vol. 8, Issue 5
Contrasting Soil pH Effects on Fungal and Bacterial Growth Suggest Functional Redundancy in Carbon Mineralization
journal, January 2009
- Rousk, J.; Brookes, P. C.; Baath, E.
- Applied and Environmental Microbiology, Vol. 75, Issue 6
Metabolic functions of Pseudomonas fluorescens strains from Populus deltoides depend on rhizosphere or endosphere isolation compartment
journal, October 2015
- Timm, Collin M.; Campbell, Alisha G.; Utturkar, Sagar M.
- Frontiers in Microbiology, Vol. 6
Rare Species and Ecosystem Functioning
journal, June 2005
- Lyons, K. G.; Brigham, C. A.; Traut, B. H.
- Conservation Biology, Vol. 19, Issue 4
Dominant species maintain ecosystem function with non-random species loss
journal, June 2003
- Smith, Melinda D.; Knapp, Alan K.
- Ecology Letters, Vol. 6, Issue 6
Quorum Sensing and Quorum Quenching: The Yin and Yang of Bacterial Communication
journal, January 2009
- Uroz, Stéphane; Dessaux, Yves; Oger, Phil
- ChemBioChem, Vol. 10, Issue 2
Influence of a dominant macrophyte, Juncus effusus, on wetland plant species richness, diversity, and community composition
journal, February 2002
- Ervin, Gary N.; Wetzel, Robert G.
- Oecologia, Vol. 130, Issue 4
Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota
journal, August 2012
- Bulgarelli, Davide; Rott, Matthias; Schlaeppi, Klaus
- Nature, Vol. 488, Issue 7409
Global patterns in the biogeography of bacterial taxa: Global bacterial biogeography
journal, August 2010
- Nemergut, Diana R.; Costello, Elizabeth K.; Hamady, Micah
- Environmental Microbiology, Vol. 13, Issue 1
Microbiome-wide association studies link dynamic microbial consortia to disease
journal, July 2016
- Gilbert, Jack A.; Quinn, Robert A.; Debelius, Justine
- Nature, Vol. 535, Issue 7610
Auxin Control of Root Development
journal, April 2010
- Overvoorde, P.; Fukaki, H.; Beeckman, T.
- Cold Spring Harbor Perspectives in Biology, Vol. 2, Issue 6
The microbiome beyond the horizon of ecological and evolutionary theory
journal, October 2017
- Koskella, Britt; Hall, Lindsay J.; Metcalf, C. Jessica E.
- Nature Ecology & Evolution, Vol. 1, Issue 11
Population-level analysis of gut microbiome variation
journal, April 2016
- Falony, Gwen; Joossens, Marie; Vieira-Silva, Sara
- Science, Vol. 352, Issue 6285
Biodiversity and ecosystem functioning: A complex adaptive systems approach
journal, January 2004
- Norberg, Jon
- Limnology and Oceanography, Vol. 49, Issue 4part2
Functional consequences of realistic extinction scenarios in Amazonian soil food webs
journal, February 2017
- Cárdenas, Rafael E.; Donoso, David A.; Argoti, Adriana
- Ecosphere, Vol. 8, Issue 2
Functional traits explain ecosystem function through opposing mechanisms
journal, June 2017
- Cadotte, Marc W.
- Ecology Letters, Vol. 20, Issue 8
Identifying Gut Microbe-Host Phenotype Relationships Using Combinatorial Communities in Gnotobiotic Mice
journal, January 2014
- Faith, J. J.; Ahern, P. P.; Ridaura, V. K.
- Science Translational Medicine, Vol. 6, Issue 220
Non-random species loss in bacterial communities reduces antifungal volatile production
journal, August 2015
- Hol, W. H. Gera; Garbeva, Paolina; Hordijk, Cornelis
- Ecology, Vol. 96, Issue 8
Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative
journal, April 2014
- Wagner, Maggie R.; Lundberg, Derek S.; Coleman-Derr, Devin
- Ecology Letters, Vol. 17, Issue 6
Intestinal microbiota in human health and disease: the impact of probiotics
journal, May 2011
- Gerritsen, Jacoline; Smidt, Hauke; Rijkers, Ger T.
- Genes & Nutrition, Vol. 6, Issue 3
Microbial diversity and soil functions
journal, January 2017
- Nannipieri, P.; Ascher, J.; Ceccherini, M. T.
- European Journal of Soil Science, Vol. 68, Issue 1
Impaired glucose metabolism and altered gut microbiome despite calorie restriction of ob/ob mice
journal, September 2019
- Kashani, Alireza; Brejnrod, Asker Daniel; Jin, Chunyu
- Animal Microbiome, Vol. 1, Issue 1
Defining the core Arabidopsis thaliana root microbiome
text, January 2012
- E., Ley, Ruth; Julien, Tremblay,; L., Dangl, Jeffery
- The University of North Carolina at Chapel Hill University Libraries
Design of synthetic bacterial communities for predictable plant phenotypes
text, January 2018
- G., Castrillo,; C. D., Jones,; V., Jojic,
- Public Library of Science
Where less may be more: how the rare biosphere pulls ecosystems strings
text, January 2017
- Jousset, Alexandre; Rillig, Matthias C.; Bienhold, Christina
- Freie Universität Berlin
Fitting Linear Mixed-Effects Models Using lme4
text, January 2015
- Douglas, Bates,; Martin, Mächler,; Ben, Bolker,
- ETH Zurich
Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative
text, January 2014
- S., Lundberg, Derek; Thomas, Mitchell-Olds,; G., Tringe, Susannah
- The University of North Carolina at Chapel Hill University Libraries
Fitting Linear Mixed-Effects Models using lme4
preprint, January 2014
- Bates, Douglas; Mächler, Martin; Bolker, Ben
- arXiv
Data for: Relatively rare root endophytic bacteria drive plant resource allocation patterns and tissue nutrient concentration in unpredictable ways
dataset, January 2019
- Henning, Jeremiah
- Dryad
Data for: Relatively rare root endophytic bacteria drive plant resource allocation patterns and tissue nutrient concentration in unpredictable ways
dataset, January 2019
- Henning, Jeremiah
- Dryad
Works referencing / citing this record:
Data for: Relatively rare root endophytic bacteria drive plant resource allocation patterns and tissue nutrient concentration in unpredictable ways
dataset, January 2019
- Henning, Jeremiah
- Dryad
Data for: Relatively rare root endophytic bacteria drive plant resource allocation patterns and tissue nutrient concentration in unpredictable ways
dataset, January 2019
- Henning, Jeremiah
- Dryad
Figures / Tables found in this record: