Search Menu
DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information
Search Scholarly Publications

Title: Draft Genome Sequence of a Rare Smut Relative, Tilletiaria anomala UBC 951

Abstract

We present the draft genome sequence of the smut fungus Tilletiaria anomala UBC 951 (Basidiomycota, Ustilaginomycotina). The sequenced genome size is 18.7 Mb, consisting of 289 scaffolds and a total of 6,810 predicted genes. This is the first genome sequence published for a fungus in the order Georgefisheriales (Exobasidiomycetes).

Authors:
 [1];  [2];  [3];  [2];  [2];  [2];  [2];  [2];  [2];  [4];  [1]
+ Show Author Affiliations
  1. Purdue Univ., West Lafayette, IN (United States). Department of Botany and Plant Pathology
  2. U.S. Department of Energy Joint Genome Institute, Walnut Creek, CA (United States)
  3. Aix-Marseille Univ., and CNRS, Marseille (France). Architecture et Fonction des Macromolecules biologiques
  4. Oregon State Univ., Corvallis, OR (United States). Department of Botany and Plant Pathology
Publication Date:
Research Org.:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Org.:
USDOE Office of Science (SC)
OSTI Identifier:
1247473
Report Number(s):
LBNL-178119
Journal ID: ISSN 2169-8287; ir:178119
Grant/Contract Number:  
AC02-05CH11231; NSF DEB-0732968
Resource Type:
Accepted Manuscript
Journal Name:
Genome Announcements
Additional Journal Information:
Journal Volume: 2; Journal Issue: 3; Journal ID: ISSN 2169-8287
Publisher:
American Society for Microbiology
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES

Citation Formats

Toome, Merje, Kuo, Alan, Henrissat, Bernard, Lipzen, Anna, Tritt, Andew, Yoshinaga, Yuko, Zane, Matthew, Barry, Kerrie, Grigoriev, Igor V., Spatafora, Joseph W., and Aime, M. Catherine. Draft Genome Sequence of a Rare Smut Relative, Tilletiaria anomala UBC 951. United States: N. p., 2014. Web. doi:10.1128/genomeA.00539-14.
Copy to clipboard
Toome, Merje, Kuo, Alan, Henrissat, Bernard, Lipzen, Anna, Tritt, Andew, Yoshinaga, Yuko, Zane, Matthew, Barry, Kerrie, Grigoriev, Igor V., Spatafora, Joseph W., & Aime, M. Catherine. Draft Genome Sequence of a Rare Smut Relative, Tilletiaria anomala UBC 951. United States. https://doi.org/10.1128/genomeA.00539-14
Copy to clipboard
Toome, Merje, Kuo, Alan, Henrissat, Bernard, Lipzen, Anna, Tritt, Andew, Yoshinaga, Yuko, Zane, Matthew, Barry, Kerrie, Grigoriev, Igor V., Spatafora, Joseph W., and Aime, M. Catherine. Thu . "Draft Genome Sequence of a Rare Smut Relative, Tilletiaria anomala UBC 951". United States. https://doi.org/10.1128/genomeA.00539-14. https://www.osti.gov/servlets/purl/1247473.
Copy to clipboard
@article{osti_1247473,
title = {Draft Genome Sequence of a Rare Smut Relative, Tilletiaria anomala UBC 951},
author = {Toome, Merje and Kuo, Alan and Henrissat, Bernard and Lipzen, Anna and Tritt, Andew and Yoshinaga, Yuko and Zane, Matthew and Barry, Kerrie and Grigoriev, Igor V. and Spatafora, Joseph W. and Aime, M. Catherine},
abstractNote = {We present the draft genome sequence of the smut fungus Tilletiaria anomala UBC 951 (Basidiomycota, Ustilaginomycotina). The sequenced genome size is 18.7 Mb, consisting of 289 scaffolds and a total of 6,810 predicted genes. This is the first genome sequence published for a fungus in the order Georgefisheriales (Exobasidiomycetes).},
doi = {10.1128/genomeA.00539-14},
journal = {Genome Announcements},
number = 3,
volume = 2,
place = {United States},
year = {Thu Jun 12 00:00:00 EDT 2014},
month = {Thu Jun 12 00:00:00 EDT 2014}
}
Copy to clipboard
Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record
https://doi.org/10.1128/genomeA.00539-14
Copyright Statement
Other availability
Search WorldCat Search WorldCat to find libraries that may hold this journal
Save / Share:
Export Metadata
Save to My Library
You must Sign In or Create an Account in order to save documents to your library.

Works referenced in this record:

A phylogenetic study of the genus Tilletiopsis, Tilletiaria anomala and related taxa based on the small subunit ribosomal DNA sequences.
journal, January 1996

  • Takashima, Masako; Nakase, Takashi
  • The Journal of General and Applied Microbiology, Vol. 42, Issue 5
  • DOI: 10.2323/jgam.42.421

Tilletiaria Bandoni & Johri (1972)
book, January 2011

Tilletiaria : a new genus in the Ustilaginales
journal, January 1972

  • Bandoni, R. J.; Johri, B. N.
  • Canadian Journal of Botany, Vol. 50, Issue 1
  • DOI: 10.1139/b72-007

Genome sequencing provides insight into the reproductive biology, nutritional mode and ploidy of the fern pathogen Mixia osmundae
journal, December 2013

  • Toome, Merje; Ohm, Robin A.; Riley, Robert W.
  • New Phytologist, Vol. 202, Issue 2
  • DOI: 10.1111/nph.12653

A phylogenetic hypothesis of Ustilaginomycotina based on multiple gene analyses and morphological data
journal, November 2006

MycoCosm portal: gearing up for 1000 fungal genomes
journal, December 2013

  • Grigoriev, Igor V.; Nikitin, Roman; Haridas, Sajeet
  • Nucleic Acids Research, Vol. 42, Issue D1
  • DOI: 10.1093/nar/gkt1183

The genome of the xerotolerant mold Wallemia sebi reveals adaptations to osmotic stress and suggests cryptic sexual reproduction
journal, March 2012

  • Padamsee, Mahajabeen; Kumar, T. K. Arun; Riley, Robert
  • Fungal Genetics and Biology, Vol. 49, Issue 3
  • DOI: 10.1016/j.fgb.2012.01.007

High-quality draft assemblies of mammalian genomes from massively parallel sequence data
journal, December 2010

  • Gnerre, S.; MacCallum, I.; Przybylski, D.
  • Proceedings of the National Academy of Sciences, Vol. 108, Issue 4
  • DOI: 10.1073/pnas.1017351108

Microbial community profiles in intercellular fluid of rice
journal, December 2010

  • Takahashi, Hideki; Sekiguchi, Hiroyuki; Ito, Toyoaki
  • Journal of General Plant Pathology, Vol. 77, Issue 2
  • DOI: 10.1007/s10327-010-0289-3
    Sort by:
    [ × clear filter / sort ]

    Works referencing / citing this record:

    Broad Genomic Sampling Reveals a Smut Pathogenic Ancestry of the Fungal Clade Ustilaginomycotina
    journal, May 2018

    • Kijpornyongpan, Teeratas; Mondo, Stephen J.; Barry, Kerrie
    • Molecular Biology and Evolution, Vol. 35, Issue 8
    • DOI: 10.1093/molbev/msy072

    Extracellular electron transfer systems fuel cellulose oxidative degradation
    journal, April 2016

    Basidioascus undulatus: genome, origins, and sexuality
    journal, June 2015

    Genome-Wide Annotation and Comparative Analysis of Cytochrome P450 Monooxygenases in Basidiomycete Biotrophic Plant Pathogens
    journal, November 2015

      Sort by:
      [ × clear filter / sort ]

      Similar Records in DOE PAGES and OSTI.GOV collections: