Current developments in soil organic matter modeling and the expansion of model applications. A review

Campbell, Eleanor E.; Paustian, Keith

doi:10.1088/1748-9326/10/12/123004

Title: Current developments in soil organic matter modeling and the expansion of model applications. A review

Abstract

It is important to note that Soil organic matter (SOM) is a great natural resource. It is fundamental to soil and ecosystem functions across a wide range of scales, from site-specific soil fertility and water holding capacity to global biogeochemical cycling. It is also a highly complex material that is sensitive to direct and indirect human impacts. In our SOM research, simulation models play an important role by providing a mathematical framework to integrate, examine, and test the understanding of SOM dynamics. Simulation models of SOM are also increasingly used in more ‘applied’ settings to evaluate human impacts on ecosystem function, and to manage SOM for greenhouse gas mitigation, improved soil health, and sustainable use as a natural resource. Within this context, there is a need to maintain a robust connection between scientific developments in SOM modeling approaches and SOM model applications. This need forms the basis of this review. In this review we first provide an overview of SOM modeling, focusing on SOM theory, data-model integration, and model development as evidenced by a quantitative review of SOM literature. Second, we present the landscape of SOM model applications, focusing on examples in climate change policy. Finally, we conclude by discussingmore »« less

Authors:

Campbell, Eleanor E. ^[1]; Paustian, Keith ^[1]

Colorado State Univ., Fort Collins, CO (United States)

Publication Date:: Wed Dec 23 00:00:00 EST 2015

Research Org.:: South Dakota State Univ., Brookings, SD (United States)

Sponsoring Org.:: USDOE Office of Science (SC)

OSTI Identifier:: 1240614

Grant/Contract Number:: FC36-05GO85041

Resource Type:: Accepted Manuscript

Journal Name:: Environmental Research Letters

Additional Journal Information:: Journal Volume: 10; Journal Issue: 12; Journal ID: ISSN 1748-9326

Publisher:: IOP Publishing

Country of Publication:: United States

Language:: English

Subject:: 58 GEOSCIENCES; 54 ENVIRONMENTAL SCIENCES

Citation Formats


                    Campbell, Eleanor E., and Paustian, Keith. Current developments in soil organic matter modeling and the expansion of model applications. A review.  United States: N. p., 2015. 
Web.  doi:10.1088/1748-9326/10/12/123004.

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                    Campbell, Eleanor E., & Paustian, Keith. Current developments in soil organic matter modeling and the expansion of model applications. A review.  United States.  https://doi.org/10.1088/1748-9326/10/12/123004

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                    Campbell, Eleanor E., and Paustian, Keith. Wed .  
"Current developments in soil organic matter modeling and the expansion of model applications. A review".  United States.  https://doi.org/10.1088/1748-9326/10/12/123004.  https://www.osti.gov/servlets/purl/1240614.

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@article{osti_1240614,

  title        = {Current developments in soil organic matter modeling and the expansion of model applications. A review},

  author       = {Campbell, Eleanor E. and Paustian, Keith},

  abstractNote = {It is important to note that Soil organic matter (SOM) is a great natural resource. It is fundamental to soil and ecosystem functions across a wide range of scales, from site-specific soil fertility and water holding capacity to global biogeochemical cycling. It is also a highly complex material that is sensitive to direct and indirect human impacts. In our SOM research, simulation models play an important role by providing a mathematical framework to integrate, examine, and test the understanding of SOM dynamics. Simulation models of SOM are also increasingly used in more ‘applied’ settings to evaluate human impacts on ecosystem function, and to manage SOM for greenhouse gas mitigation, improved soil health, and sustainable use as a natural resource. Within this context, there is a need to maintain a robust connection between scientific developments in SOM modeling approaches and SOM model applications. This need forms the basis of this review. In this review we first provide an overview of SOM modeling, focusing on SOM theory, data-model integration, and model development as evidenced by a quantitative review of SOM literature. Second, we present the landscape of SOM model applications, focusing on examples in climate change policy. Finally, we conclude by discussing five areas of recent developments in SOM modeling including: (1) microbial roles in SOM stabilization; (2) modeling SOM saturation kinetics; (3) temperature controls on decomposition; (4)SOM dynamics in deep soil layers; and (5)SOM representation in earth system models. Our aim is to comprehensively connect SOM model development to its applications, revealing knowledge gaps in need of focused interdisciplinary attention and exposing pitfalls that, if avoided, can lead to best use of SOM models to support policy initiatives and sustainable land management solutions.},

  doi          = {10.1088/1748-9326/10/12/123004},

  journal      = {Environmental Research Letters},

  number       = 12,

  volume       = 10,

  place        = {United States},

  year         = {Wed Dec 23 00:00:00 EST 2015},

  month        = {Wed Dec 23 00:00:00 EST 2015}

}

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Title: Current developments in soil organic matter modeling and the expansion of model applications. A review

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The evolution of, and revolution in, land surface schemes designed for climate models journal, January 2003

The turnover of organic carbon in subsoils. Part 2. Modelling carbon turnover journal, April 2008

Sensitivity of soil organic carbon stocks and fractions to different land-use changes across Europe journal, January 2013

Quality: A Bridge between Theory and Experiment in Soil Organic Matter Studies journal, September 1996

Acceleration of global warming due to carbon-cycle feedbacks in a coupled climate model journal, November 2000

Estimating vital statistics and age distributions of measurable soil organic carbon fractions based on their pathway of formation and radiocarbon content journal, September 2004

A framework for benchmarking land models journal, January 2012

Persistence of soil organic matter as an ecosystem property journal, October 2011

Dissolved Organic Carbon in Terrestrial Ecosystems: Synthesis and a Model journal, January 2001

Digging deeper: fine-root responses to rising atmospheric CO2 concentration in forested ecosystems journal, December 2009

A model for calculating nitrogen fluxes in soil using 15N tracing journal, December 1998

A Mathematical Treatment of the Effect of Cropping System on soil Organic Nitrogen in two Long-Term Sequential Experiments journal, January 1975

A framework for representing microbial decomposition in coupled climate models journal, August 2011

An Examination of the Degtjareff Method for Determining soil Organic Matter, and a Proposed Modification of the Chromic acid Titration Method journal, January 1934

Enhanced terrestrial carbon uptake in the Northern High Latitudes in the 21st century from the Coupled Carbon Cycle Climate Model Intercomparison Project model projections journal, February 2010

Factors Controlling Nitrogen Cycling and Nitrogen Saturation in Northern Temperate Forest Ecosystems journal, August 1991

Microbial contributions to climate change through carbon cycle feedbacks journal, July 2008

Theoretical analysis of decomposition of heterogeneous substrates journal, January 1985

Carbon and decomposition model Yasso for forest soils journal, November 2005

Tillage and Residue Management Effects on Soil Carbon and Nitrogen Under Irrigated Continuous Corn journal, January 2014

Soil Carbon Storage Response to Temperature: an Hypothesis journal, May 2001

Soil carbon saturation: Implications for measurable carbon pool dynamics in long-term incubations journal, February 2009

Equations for Following Nutrient Transformations in Soil, Utilizing Tracer Data1 journal, January 1954

Priming and substrate quality interactions in soil organic matter models journal, January 2013

Modeling consequences of straw residues export on soil organic carbon journal, March 2008

Organic matter and water-stable aggregates in soils journal, June 1982

Mathematical Expression of Seasonal Changes in Soil Organic Matter journal, October 1964

Does adding microbial mechanisms of decomposition improve soil organic matter models? A comparison of four models using data from a pulsed rewetting experiment journal, September 2009

A semi-distributed ntegrated itrogen model for multiple source assessment in tchments (INCA): Part I — model structure and process equations
journal, March 1998

Mathematical Simulation of the Dynamics of Interacting Populations of Rhizosphere Microorganisms
journal, March 2004

Ecosystem development explained by competition within and between material cycles
journal, January 1998

Landscapes as patches of plant functional types: An integrating concept for climate and ecosystem models: PLANT FUNCTIONAL TYPES AND CLIMATE MODELS
journal, May 2002

Influence of lime, fertilizer and manure applications on soil organic matter content and soil physical conditions: a review
journal, June 1998

Modeling the Dynamics of Soil Organic Matter and Nutrient Cycling
book, November 2014

Soil carbon sequestration and land-use change: processes and potential
journal, March 2000

A big-microsite framework for soil carbon modeling
journal, September 2014

Potential Net Primary Productivity in South America: Application of a Global Model
journal, November 1991

When microbes and consumers determine the limiting nutrient of autotrophs: a theoretical analysis
journal, October 2008

Aggregate-associated soil organic matter as an ecosystem property and a measurement tool
journal, January 2014

A model of nitrogen flows in grassland
journal, December 1989

Review of mechanisms and quantification of priming effects
journal, October 2000

Global change effects on a mechanistic decomposer food web model
journal, February 2005

A theoretical analysis of nonlinearities and feedbacks in soil carbon and nitrogen cycles
journal, July 2007

Spatio-Temporal Simulation of the Field-Scale Evolution of Organic Carbon over the Landscape
journal, September 2003

Decomposition of European beech (Fagus sylvatica) litter: Combining quality theory and 15N labelling experiments
journal, February 2008

Modelling the impact of pore space distribution on carbon turnover
journal, November 2007

The Dual Arrhenius and Michaelis-Menten kinetics model for decomposition of soil organic matter at hourly to seasonal time scales
journal, October 2011

Substrate and environmental controls on microbial assimilation of soil organic carbon: a framework for Earth system models
journal, February 2014

Soil carbon saturation: concept, evidence and evaluation
journal, August 2007

Icbm: the Introductory Carbon Balance Model for Exploration of soil Carbon Balances
journal, November 1997

ECOSIMP2 model: Prediction of CO2 concentration changes and carbon status in closed ecosystems
journal, November 1994

Model estimates of CO2 emissions from soil in response to global warming
journal, May 1991

Modelling carbon balances of coastal arctic tundra under changing climate
journal, January 2003

Reconciling leaf physiological traits and canopy flux data: Use of the TRY and FLUXNET databases in the Community Land Model version 4: COMMUNITY LAND MODEL CANOPY SCALING
journal, June 2012

A general model of litter decomposition in the northern Chihuahuan Desert
journal, January 1991

Importance of cryptic growth, yield factors and maintenance energy in models of microbial growth in soil
journal, January 1986

Comparative Study of Decomposition Rates of Organic Matter in Temperate and Tropical Regions
journal, January 1949

Monitoring Soil Quality to Assess the Sustainability of Harvesting Corn Stover
journal, January 2011

Litter Quality and the Temperature Sensitivity of Decomposition
journal, February 2005

Climate–Carbon Cycle Feedback Analysis: Results from the C ⁴ MIP Model Intercomparison
journal, July 2006

Old and stable soil organic matter is not necessarily chemically recalcitrant: implications for modeling concepts and temperature sensitivity: SLOW TURNOVER OF LABILE SOIL ORGANIC MATTER
journal, January 2011

Uncertainty in climate-carbon-cycle projections associated with the sensitivity of soil respiration to temperature
journal, April 2003

Beneficial Biofuels--The Food, Energy, and Environment Trilemma
journal, July 2009

A model of biogeochemical cycles of carbon, nitrogen, and phosphorus including symbiotic nitrogen fixation and phosphatase production: A BIOGEOCHEMICAL MODEL OF C, N, AND P
journal, March 2007

Variations in microbial community composition through two soil depth profiles
journal, January 2003

A kinetic method for estimating the biomass of microbial functional groups in soil
journal, January 1996

AggModel: A soil organic matter model with measurable pools for use in incubation studies
journal, August 2013

Modeling Leaching as a Decomposition Process in Humid Montane Forests
journal, September 1997

A Modeling Approach to Determining the Relationship Between Erosion and Soil Productivity
journal, January 1984

Priming depletes soil carbon and releases nitrogen in a scrub-oak ecosystem exposed to elevated CO2
journal, January 2009

An equilibrium model of the terrestrial carbon budget
journal, July 1995

Food and fuel for all: realistic or foolish?
journal, January 2007

Applicability of the Carbon-Dating Method of Analysis to soil Humus Studies
journal, January 1967

Partitioning soil carbon responses to warming: Model-derived guidance for data interpretation
journal, November 2010

Modelling the impact of microbial grazers on soluble rhizodeposit turnover
journal, December 2004

What is recalcitrant soil organic matter?
journal, January 2010

Radiocarbon Dating for Determination of Soil Organic Matter Pool Sizes and Dynamics
journal, January 1997

The evolution of, and revolution in, land surface schemes designed for climate models
journal, January 2003

The turnover of organic carbon in subsoils. Part 2. Modelling carbon turnover
journal, April 2008

Sensitivity of soil organic carbon stocks and fractions to different land-use changes across Europe
journal, January 2013

Quality: A Bridge between Theory and Experiment in Soil Organic Matter Studies
journal, September 1996

Acceleration of global warming due to carbon-cycle feedbacks in a coupled climate model
journal, November 2000

Estimating vital statistics and age distributions of measurable soil organic carbon fractions based on their pathway of formation and radiocarbon content
journal, September 2004

A framework for benchmarking land models
journal, January 2012

Persistence of soil organic matter as an ecosystem property
journal, October 2011

Dissolved Organic Carbon in Terrestrial Ecosystems: Synthesis and a Model
journal, January 2001

Digging deeper: fine-root responses to rising atmospheric CO2 concentration in forested ecosystems
journal, December 2009

A model for calculating nitrogen fluxes in soil using 15N tracing
journal, December 1998

A Mathematical Treatment of the Effect of Cropping System on soil Organic Nitrogen in two Long-Term Sequential Experiments
journal, January 1975

A framework for representing microbial decomposition in coupled climate models
journal, August 2011

An Examination of the Degtjareff Method for Determining soil Organic Matter, and a Proposed Modification of the Chromic acid Titration Method
journal, January 1934

Enhanced terrestrial carbon uptake in the Northern High Latitudes in the 21st century from the Coupled Carbon Cycle Climate Model Intercomparison Project model projections
journal, February 2010

Factors Controlling Nitrogen Cycling and Nitrogen Saturation in Northern Temperate Forest Ecosystems
journal, August 1991

Microbial contributions to climate change through carbon cycle feedbacks
journal, July 2008

Theoretical analysis of decomposition of heterogeneous substrates
journal, January 1985

Carbon and decomposition model Yasso for forest soils
journal, November 2005

Tillage and Residue Management Effects on Soil Carbon and Nitrogen Under Irrigated Continuous Corn
journal, January 2014

Soil Carbon Storage Response to Temperature: an Hypothesis
journal, May 2001

Soil carbon saturation: Implications for measurable carbon pool dynamics in long-term incubations
journal, February 2009

Equations for Following Nutrient Transformations in Soil, Utilizing Tracer Data1
journal, January 1954

Priming and substrate quality interactions in soil organic matter models
journal, January 2013

Modeling consequences of straw residues export on soil organic carbon
journal, March 2008

Organic matter and water-stable aggregates in soils
journal, June 1982

Mathematical Expression of Seasonal Changes in Soil Organic Matter
journal, October 1964

Does adding microbial mechanisms of decomposition improve soil organic matter models? A comparison of four models using data from a pulsed rewetting experiment
journal, September 2009

The retention of organic matter in soils
journal, February 1988

The effect of vertically resolved soil biogeochemistry and alternate soil C and N models on C dynamics of CLM4
journal, January 2013

A multi-model comparison of soil carbon assessment of a coniferous forest stand
journal, July 2012