Shape control and compartmentalization in active colloidal cells
Abstract
Small autonomous machines like biological cells or soft robots can convert energy input into control of function and form. It is desired that this behavior emerges spontaneously and can be easily switched over time. For this purpose, in this paper we introduce an active matter system that is loosely inspired by biology and which we term an active colloidal cell. The active colloidal cell consists of a boundary and a fluid interior, both of which are built from identical rotating spinners whose activity creates convective flows. Similarly to biological cell motility, which is driven by cytoskeletal components spread throughout the entire volume of the cell, active colloidal cells are characterized by highly distributed energy conversion. We demonstrate that we can control the shape of the active colloidal cell and drive compartmentalization by varying the details of the boundary (hard vs. flexible) and the character of the spinners (passive vs. active). We report buckling of the boundary controlled by the pattern of boundary activity, as well as formation of core–shell and inverted Janus phase-separated configurations within the active cell interior. As the cell size is increased, the inverted Janus configuration spontaneously breaks its mirror symmetry. The result is a bubble–crescent configuration,more »
- Authors:
-
- Department of Chemical Engineering, University of Michigan, Ann Arbor, MI 48109,, Biointerfaces Institute, University of Michigan, Ann Arbor, MI 48109,
- Department of Chemical Engineering, Pennsylvania State University, University Park, PA 16802,
- Department of Chemical Engineering, Pennsylvania State University, University Park, PA 16802,, Department of NanoEngineering, University of California, San Diego, La Jolla, CA 92093,
- Department of Mechanical Engineering, University of Michigan, Ann Arbor, MI 48109,
- Department of Chemical Engineering, University of Michigan, Ann Arbor, MI 48109,, Biointerfaces Institute, University of Michigan, Ann Arbor, MI 48109,, Department of Materials Science and Engineering, University of Michigan, Ann Arbor, MI 48109
- Publication Date:
- Research Org.:
- Univ. of Michigan, Ann Arbor, MI (United States); Pennsylvania State Univ., University Park, PA (United States); Energy Frontier Research Centers (EFRC) (United States). Center for Bio-Inspired Energy Science (CBES)
- Sponsoring Org.:
- USDOE Office of Science (SC), Basic Energy Sciences (BES)
- OSTI Identifier:
- 1235147
- Alternate Identifier(s):
- OSTI ID: 1347961
- Grant/Contract Number:
- SC00000989; SC0000989
- Resource Type:
- Published Article
- Journal Name:
- Proceedings of the National Academy of Sciences of the United States of America
- Additional Journal Information:
- Journal Name: Proceedings of the National Academy of Sciences of the United States of America Journal Volume: 112 Journal Issue: 34; Journal ID: ISSN 0027-8424
- Publisher:
- Proceedings of the National Academy of Sciences
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES; 36 MATERIALS SCIENCE; active matter; emergent pattern; confinement; colloids
Citation Formats
Spellings, Matthew, Engel, Michael, Klotsa, Daphne, Sabrina, Syeda, Drews, Aaron M., Nguyen, Nguyen H. P., Bishop, Kyle J. M., and Glotzer, Sharon C. Shape control and compartmentalization in active colloidal cells. United States: N. p., 2015.
Web. doi:10.1073/pnas.1513361112.
Spellings, Matthew, Engel, Michael, Klotsa, Daphne, Sabrina, Syeda, Drews, Aaron M., Nguyen, Nguyen H. P., Bishop, Kyle J. M., & Glotzer, Sharon C. Shape control and compartmentalization in active colloidal cells. United States. https://doi.org/10.1073/pnas.1513361112
Spellings, Matthew, Engel, Michael, Klotsa, Daphne, Sabrina, Syeda, Drews, Aaron M., Nguyen, Nguyen H. P., Bishop, Kyle J. M., and Glotzer, Sharon C. Fri .
"Shape control and compartmentalization in active colloidal cells". United States. https://doi.org/10.1073/pnas.1513361112.
@article{osti_1235147,
title = {Shape control and compartmentalization in active colloidal cells},
author = {Spellings, Matthew and Engel, Michael and Klotsa, Daphne and Sabrina, Syeda and Drews, Aaron M. and Nguyen, Nguyen H. P. and Bishop, Kyle J. M. and Glotzer, Sharon C.},
abstractNote = {Small autonomous machines like biological cells or soft robots can convert energy input into control of function and form. It is desired that this behavior emerges spontaneously and can be easily switched over time. For this purpose, in this paper we introduce an active matter system that is loosely inspired by biology and which we term an active colloidal cell. The active colloidal cell consists of a boundary and a fluid interior, both of which are built from identical rotating spinners whose activity creates convective flows. Similarly to biological cell motility, which is driven by cytoskeletal components spread throughout the entire volume of the cell, active colloidal cells are characterized by highly distributed energy conversion. We demonstrate that we can control the shape of the active colloidal cell and drive compartmentalization by varying the details of the boundary (hard vs. flexible) and the character of the spinners (passive vs. active). We report buckling of the boundary controlled by the pattern of boundary activity, as well as formation of core–shell and inverted Janus phase-separated configurations within the active cell interior. As the cell size is increased, the inverted Janus configuration spontaneously breaks its mirror symmetry. The result is a bubble–crescent configuration, which alternates between two degenerate states over time and exhibits collective migration of the fluid along the boundary. Finally, our results are obtained using microscopic, non–momentum-conserving Langevin dynamics simulations and verified via a phase-field continuum model coupled to a Navier–Stokes equation.},
doi = {10.1073/pnas.1513361112},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
number = 34,
volume = 112,
place = {United States},
year = {Fri Aug 07 00:00:00 EDT 2015},
month = {Fri Aug 07 00:00:00 EDT 2015}
}
https://doi.org/10.1073/pnas.1513361112
Web of Science
Works referenced in this record:
Emergent Cometlike Swarming of Optically Driven Thermally Active Colloids
journal, February 2014
- Cohen, Jack A.; Golestanian, Ramin
- Physical Review Letters, Vol. 112, Issue 6
Self-Assembly of Catalytically Active Colloidal Molecules: Tailoring Activity Through Surface Chemistry
journal, February 2014
- Soto, Rodrigo; Golestanian, Ramin
- Physical Review Letters, Vol. 112, Issue 6
Hydrodynamics of soft active matter
journal, July 2013
- Marchetti, M. C.; Joanny, J. F.; Ramaswamy, S.
- Reviews of Modern Physics, Vol. 85, Issue 3
Role of Repulsive Forces in Determining the Equilibrium Structure of Simple Liquids
journal, June 1971
- Weeks, John D.; Chandler, David; Andersen, Hans C.
- The Journal of Chemical Physics, Vol. 54, Issue 12
Fast-Moving Bacteria Self-Organize into Active Two-Dimensional Crystals of Rotating Cells
journal, April 2015
- Petroff, Alexander P.; Wu, Xiao-Lun; Libchaber, Albert
- Physical Review Letters, Vol. 114, Issue 15
Nonequilibrium clustering of self-propelled rods
journal, September 2006
- Peruani, Fernando; Deutsch, Andreas; Bär, Markus
- Physical Review E, Vol. 74, Issue 3
Meso-scale turbulence in living fluids
journal, August 2012
- Wensink, H. H.; Dunkel, J.; Heidenreich, S.
- Proceedings of the National Academy of Sciences, Vol. 109, Issue 36
Actuation of shape-memory colloidal fibres of Janus ellipsoids
journal, November 2014
- Shah, Aayush A.; Schultz, Benjamin; Zhang, Wenjia
- Nature Materials, Vol. 14, Issue 1
Wall accumulation of self-propelled spheres
journal, February 2013
- Elgeti, Jens; Gompper, Gerhard
- EPL (Europhysics Letters), Vol. 101, Issue 4
Novel Type of Phase Transition in a System of Self-Driven Particles
journal, August 1995
- Vicsek, Tamás; Czirók, András; Ben-Jacob, Eshel
- Physical Review Letters, Vol. 75, Issue 6
Dynamics of self-propelled particles under strong confinement
journal, January 2014
- Fily, Yaouen; Baskaran, Aparna; Hagan, Michael F.
- Soft Matter, Vol. 10, Issue 30
Dynamical Clustering and Phase Separation in Suspensions of Self-Propelled Colloidal Particles
journal, June 2013
- Buttinoni, Ivo; Bialké, Julian; Kümmel, Felix
- Physical Review Letters, Vol. 110, Issue 23
Impact of external flow on the dynamics of swimming microorganisms near surfaces
journal, March 2014
- Chilukuri, Sandeep; Collins, Cynthia H.; Underhill, Patrick T.
- Journal of Physics: Condensed Matter, Vol. 26, Issue 11
Crystallization in a Dense Suspension of Self-Propelled Particles
journal, April 2012
- Bialké, Julian; Speck, Thomas; Löwen, Hartmut
- Physical Review Letters, Vol. 108, Issue 16
Active nematics on a substrate: Giant number fluctuations and long-time tails
journal, April 2003
- Ramaswamy, S.; Simha, R. Aditi; Toner, J.
- Europhysics Letters (EPL), Vol. 62, Issue 2
Confinement Stabilizes a Bacterial Suspension into a Spiral Vortex
journal, June 2013
- Wioland, Hugo; Woodhouse, Francis G.; Dunkel, Jörn
- Physical Review Letters, Vol. 110, Issue 26
Diffusive transport without detailed balance in motile bacteria: does microbiology need statistical physics?
journal, March 2012
- Cates, M. E.
- Reports on Progress in Physics, Vol. 75, Issue 4
Fluid flows created by swimming bacteria drive self-organization in confined suspensions
journal, June 2014
- Lushi, Enkeleida; Wioland, Hugo; Goldstein, Raymond E.
- Proceedings of the National Academy of Sciences, Vol. 111, Issue 27
Circularly confined microswimmers exhibit multiple global patterns
journal, April 2015
- Tsang, Alan Cheng Hou; Kanso, Eva
- Physical Review E, Vol. 91, Issue 4
Direct Observation of Hydrodynamic Rotation-Translation Coupling between Two Colloidal Spheres
journal, December 2006
- Martin, S.; Reichert, M.; Stark, H.
- Physical Review Letters, Vol. 97, Issue 24
Collective motion of organisms in three dimensions
journal, February 1999
- Czirók, András; Vicsek, Mária; Vicsek, Tamás
- Physica A: Statistical Mechanics and its Applications, Vol. 264, Issue 1-2
Bird Flocks as Condensed Matter
journal, March 2014
- Cavagna, Andrea; Giardina, Irene
- Annual Review of Condensed Matter Physics, Vol. 5, Issue 1
Athermal Phase Separation of Self-Propelled Particles with No Alignment
journal, June 2012
- Fily, Yaouen; Marchetti, M. Cristina
- Physical Review Letters, Vol. 108, Issue 23
Synchronization and Collective Dynamics in a Carpet of Microfluidic Rotors
journal, April 2010
- Uchida, Nariya; Golestanian, Ramin
- Physical Review Letters, Vol. 104, Issue 17
Statistical Mechanics of Interacting Run-and-Tumble Bacteria
journal, May 2008
- Tailleur, J.; Cates, M. E.
- Physical Review Letters, Vol. 100, Issue 21
Terminal supraparticle assemblies from similarly charged protein molecules and nanoparticles
journal, May 2014
- Park, Jai Il; Nguyen, Trung Dac; de Queirós Silveira, Gleiciani
- Nature Communications, Vol. 5, Issue 1
Self-assembled autonomous runners and tumblers
journal, July 2010
- Ebbens, Stephen; Jones, Richard A. L.; Ryan, Anthony J.
- Physical Review E, Vol. 82, Issue 1
General purpose molecular dynamics simulations fully implemented on graphics processing units
journal, May 2008
- Anderson, Joshua A.; Lorenz, Chris D.; Travesset, A.
- Journal of Computational Physics, Vol. 227, Issue 10
Dynamic self-assembly of magnetized, millimetre-sized objects rotating at a liquid–air interface
journal, June 2000
- Grzybowski, Bartosz A.; Stone, Howard A.; Whitesides, George M.
- Nature, Vol. 405, Issue 6790
Catalytic Nanomotors: Autonomous Movement of Striped Nanorods
journal, October 2004
- Paxton, Walter F.; Kistler, Kevin C.; Olmeda, Christine C.
- Journal of the American Chemical Society, Vol. 126, Issue 41
Emergence of agent swarm migration and vortex formation through inelastic collisions
journal, February 2008
- Grossman, D.; Aranson, I. S.; Ben Jacob, E.
- New Journal of Physics, Vol. 10, Issue 2
Rotating crystals of magnetic Janus colloids
journal, January 2015
- Yan, J.; Bae, S. C.; Granick, S.
- Soft Matter, Vol. 11, Issue 1
Transport coefficients for dense hard-disk systems
journal, December 2006
- García-Rojo, Ramón; Luding, Stefan; Brey, J. Javier
- Physical Review E, Vol. 74, Issue 6
Run-and-tumble dynamics of self-propelled particles in confinement
journal, March 2015
- Elgeti, Jens; Gompper, Gerhard
- EPL (Europhysics Letters), Vol. 109, Issue 5
Collective motion
journal, August 2012
- Vicsek, Tamás; Zafeiris, Anna
- Physics Reports, Vol. 517, Issue 3-4
Non-random Distribution of Bull Spermatozoa in a Drop of Sperm Suspension
journal, October 1963
- Maude, A. D.
- Nature, Vol. 200, Issue 4904
Living Crystals of Light-Activated Colloidal Surfers
journal, January 2013
- Palacci, J.; Sacanna, S.; Steinberg, A. P.
- Science, Vol. 339, Issue 6122
Topology and dynamics of active nematic vesicles
journal, September 2014
- Keber, F. C.; Loiseau, E.; Sanchez, T.
- Science, Vol. 345, Issue 6201
Spontaneously ordered motion of self-propelled particles
journal, March 1997
- Czirók, András; Stanley, H. Eugene; Vicsek, Tamás
- Journal of Physics A: Mathematical and General, Vol. 30, Issue 5
Continuum equations for magnetic and dielectric fluids with internal rotations
journal, July 2004
- Rosensweig, Ronald E.
- The Journal of Chemical Physics, Vol. 121, Issue 3
Collective Dynamics in a Binary Mixture of Hydrodynamically Coupled Microrotors
journal, May 2015
- Yeo, Kyongmin; Lushi, Enkeleida; Vlahovska, Petia M.
- Physical Review Letters, Vol. 114, Issue 18
Emergent Collective Phenomena in a Mixture of Hard Shapes through Active Rotation
journal, February 2014
- Nguyen, Nguyen H. P.; Klotsa, Daphne; Engel, Michael
- Physical Review Letters, Vol. 112, Issue 7
Opportunities in theoretical and computational polymeric materials and soft matter
journal, January 2015
- Liu, Andrea J.; Grest, Gary S.; Marchetti, M. Cristina
- Soft Matter, Vol. 11, Issue 12
Scalar φ4 field theory for active-particle phase separation
journal, July 2014
- Wittkowski, Raphael; Tiribocchi, Adriano; Stenhammar, Joakim
- Nature Communications, Vol. 5, Issue 1
When are active Brownian particles and run-and-tumble particles equivalent? Consequences for motility-induced phase separation
journal, January 2013
- Cates, M. E.; Tailleur, J.
- EPL (Europhysics Letters), Vol. 101, Issue 2
Self-Propelled Particles with Soft-Core Interactions: Patterns, Stability, and Collapse
journal, March 2006
- D’Orsogna, M. R.; Chuang, Y. L.; Bertozzi, A. L.
- Physical Review Letters, Vol. 96, Issue 10
Arrested phase separation in reproducing bacteria creates a generic route to pattern formation
journal, May 2010
- Cates, M. E.; Marenduzzo, D.; Pagonabarraga, I.
- Proceedings of the National Academy of Sciences, Vol. 107, Issue 26
Linking synchronization to self-assembly using magnetic Janus colloids
journal, November 2012
- Yan, Jing; Bloom, Moses; Bae, Sung Chul
- Nature, Vol. 491, Issue 7425, p. 578-581
Hydrodynamic Surface Interactions Enable Escherichia Coli to Seek Efficient Routes to Swim Upstream
journal, February 2007
- Hill, Jane; Kalkanci, Ozge; McMurry, Jonathan L.
- Physical Review Letters, Vol. 98, Issue 6
Aggregation and segregation of confined active particles
journal, January 2014
- Yang, Xingbo; Manning, M. Lisa; Marchetti, M. Cristina
- Soft Matter, Vol. 10, Issue 34
Active actin gels
journal, January 2012
- Khan, Shahid M.; Ali, Rehan; Asi, Nimra
- Communicative & Integrative Biology, Vol. 5, Issue 1
Active contractility in actomyosin networks
journal, April 2012
- Wang, S.; Wolynes, P. G.
- Proceedings of the National Academy of Sciences, Vol. 109, Issue 17
Dynamics of Bacterial Swarming
journal, May 2010
- Darnton, Nicholas C.; Turner, Linda; Rojevsky, Svetlana
- Biophysical Journal, Vol. 98, Issue 10
Diffuse-Interface Methods in Fluid Mechanics
journal, January 1998
- Anderson, D. M.; McFadden, G. B.; Wheeler, A. A.
- Annual Review of Fluid Mechanics, Vol. 30, Issue 1
Rigid body constraints realized in massively-parallel molecular dynamics on graphics processing units
journal, November 2011
- Nguyen, Trung Dac; Phillips, Carolyn L.; Anderson, Joshua A.
- Computer Physics Communications, Vol. 182, Issue 11
Continuum Theory of Phase Separation Kinetics for Active Brownian Particles
journal, October 2013
- Stenhammar, Joakim; Tiribocchi, Adriano; Allen, Rosalind J.
- Physical Review Letters, Vol. 111, Issue 14
Transport and Collective Dynamics in Suspensions of Confined Swimming Particles
journal, November 2005
- Hernandez-Ortiz, Juan P.; Stoltz, Christopher G.; Graham, Michael D.
- Physical Review Letters, Vol. 95, Issue 20
Multiscale Polar Theory of Microtubule and Motor-Protein Assemblies
journal, January 2015
- Gao, Tong; Blackwell, Robert; Glaser, Matthew A.
- Physical Review Letters, Vol. 114, Issue 4
Self-Motile Colloidal Particles: From Directed Propulsion to Random Walk
journal, July 2007
- Howse, Jonathan R.; Jones, Richard A. L.; Ryan, Anthony J.
- Physical Review Letters, Vol. 99, Issue 4
Effective Cahn-Hilliard Equation for the Phase Separation of Active Brownian Particles
journal, May 2014
- Speck, Thomas; Bialké, Julian; Menzel, Andreas M.
- Physical Review Letters, Vol. 112, Issue 21
Thermal and athermal three-dimensional swarms of self-propelled particles
journal, July 2012
- Nguyen, Nguyen H. P.; Jankowski, Eric; Glotzer, Sharon C.
- Physical Review E, Vol. 86, Issue 1
Controlling active self-assembly through broken particle-shape symmetry
journal, January 2014
- Wensink, H. H.; Kantsler, V.; Goldstein, R. E.
- Physical Review E, Vol. 89, Issue 1
Traffic and related self-driven many-particle systems
journal, December 2001
- Helbing, Dirk
- Reviews of Modern Physics, Vol. 73, Issue 4
Structure and Dynamics of a Phase-Separating Active Colloidal Fluid
journal, January 2013
- Redner, Gabriel S.; Hagan, Michael F.; Baskaran, Aparna
- Physical Review Letters, Vol. 110, Issue 5
Coarse‐grained description of thermo‐capillary flow
journal, March 1996
- Jasnow, David; Viñals, Jorge
- Physics of Fluids, Vol. 8, Issue 3
Coarsening dynamics of binary liquids with active rotation
journal, January 2015
- Sabrina, Syeda; Spellings, Matthew; Glotzer, Sharon C.
- Soft Matter, Vol. 11, Issue 43