The influence of water on protein properties

Mallamace, Francesco; Baglioni, Piero; Corsaro, Carmelo; Chen, Sow-Hsin; Mallamace, Domenico; Vasi, Cirino; Stanley, H. Eugene

doi:10.1063/1.4900500

Title: The influence of water on protein properties

Authors:

Mallamace, Francesco ^[1]; Baglioni, Piero ^[2]; Corsaro, Carmelo ^[3]; Chen, Sow-Hsin ^[4]; Mallamace, Domenico ^[5]; Vasi, Cirino ^[6]; Stanley, H. Eugene ^[7]

Dipartimento di Fisica e Scienze della Terra, Universit à di Messina, I-98166, Messina, Italy, Department of Nuclear Science and Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA, Center for Polymer Studies and Department of Physics, Boston University, Boston, Massachusetts 02215, USA, Consiglio Nazionale delle Ricerche-IPCF, I-98166, Messina, Italy
Dipartimento di Chimica and CSGI, Università di Firenze, 50019 Firenze, Italy
Dipartimento di Fisica e Scienze della Terra, Universit à di Messina, I-98166, Messina, Italy
Department of Nuclear Science and Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
Dipartimento di Scienze dell’Ambiente, della Sicurezza, del Territorio, degli Alimenti e della Salute, Università di Messina Viale F. Stagno d’Alcontres 31, 98166 Messina, Italy
Consiglio Nazionale delle Ricerche-IPCF, I-98166, Messina, Italy
Center for Polymer Studies and Department of Physics, Boston University, Boston, Massachusetts 02215, USA

Publication Date:: Tue Oct 28 00:00:00 EDT 2014

Sponsoring Org.:: USDOE

OSTI Identifier:: 1224267

Grant/Contract Number:: FG02-90ER45429

Resource Type:: Publisher's Accepted Manuscript

Journal Name:: Journal of Chemical Physics

Additional Journal Information:: Journal Name: Journal of Chemical Physics Journal Volume: 141 Journal Issue: 16; Journal ID: ISSN 0021-9606

Publisher:: American Institute of Physics

Country of Publication:: United States

Language:: English

Citation Formats


                    Mallamace, Francesco, Baglioni, Piero, Corsaro, Carmelo, Chen, Sow-Hsin, Mallamace, Domenico, Vasi, Cirino, and Stanley, H. Eugene. The influence of water on protein properties.  United States: N. p., 2014. 
Web.  doi:10.1063/1.4900500.

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                    Mallamace, Francesco, Baglioni, Piero, Corsaro, Carmelo, Chen, Sow-Hsin, Mallamace, Domenico, Vasi, Cirino, & Stanley, H. Eugene. The influence of water on protein properties.  United States.  https://doi.org/10.1063/1.4900500

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                    Mallamace, Francesco, Baglioni, Piero, Corsaro, Carmelo, Chen, Sow-Hsin, Mallamace, Domenico, Vasi, Cirino, and Stanley, H. Eugene. Tue .  
"The influence of water on protein properties".  United States.  https://doi.org/10.1063/1.4900500.

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@article{osti_1224267,

  title        = {The influence of water on protein properties},

  author       = {Mallamace, Francesco and Baglioni, Piero and Corsaro, Carmelo and Chen, Sow-Hsin and Mallamace, Domenico and Vasi, Cirino and Stanley, H. Eugene},

  abstractNote = {},

  doi          = {10.1063/1.4900500},

  journal      = {Journal of Chemical Physics},

  number       = 16,

  volume       = 141,

  place        = {United States},

  year         = {Tue Oct 28 00:00:00 EDT 2014},

  month        = {Tue Oct 28 00:00:00 EDT 2014}

}

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Title: The influence of water on protein properties

Citation Formats

Effects of hydration water on protein methyl group dynamics in solution journal, April 2007

Heat capacity effects in protein folding and ligand binding: a re-evaluation of the role of water in biomolecular thermodynamics journal, April 2005

Temperature dependence of the low‐ and high‐frequency Raman scattering from liquid water journal, December 1986

Glassy behavior of a protein journal, April 1989

Nature of the water specific relaxation in hydrated proteins and aqueous mixtures journal, October 2013

Fast events in protein folding: Relaxation dynamics of secondary and tertiary structure in native apomyoglobin journal, April 1997

The new insight into dynamic crossover in glass forming liquids from the apparent enthalpy analysis journal, August 2012

Surface-Mediated Folding and Misfolding of Proteins at Lipid/Water Interfaces journal, June 2002

Evidence of the existence of the low-density liquid phase in supercooled, confined water journal, December 2006

The violation of the Stokes-Einstein relation in supercooled water journal, August 2006

A Topographic View of Supercooled Liquids and Glass Formation journal, March 1995

Transport properties of glass-forming liquids suggest that dynamic crossover temperature is as important as the glass transition temperature journal, December 2010

The role of the dynamic crossover temperature and the arrest in glass-forming fluids journal, September 2011

The structure of proteins: Two hydrogen-bonded helical configurations of the polypeptide chain journal, April 1951

Supercooled liquids, glass transitions, and the Kauzmann paradox journal, June 1988

Water-inserted alpha-helical segments implicate reverse turns as folding intermediates journal, June 1989

Evidence of dynamic crossover phenomena in water and other glass-forming liquids: experiments, MD simulations and theory journal, November 2009

How Soft Is a Protein? A Protein Dynamics Force Constant Measured by Neutron Scattering journal, June 2000

Thermal motions and function of bacteriorhodopsin in purple membranes: effects of temperature and hydration studied by neutron scattering. journal, October 1993

The hydration of amides in helices; a comprehensive picture from molecular dynamics, IR, and NMR journal, March 2003

Role of Protein-Water Hydrogen Bond Dynamics in the Protein Dynamical Transition journal, March 2002

Dynamical transition of myoglobin revealed by inelastic neutron scattering journal, February 1989

Appearance of a fractional Stokes–Einstein relation in water and a structural interpretation of its onset journal, July 2009

Dynamic Transition in tRNA is Solvent Induced journal, January 2006

Cooperative charge fluctuations by migrating protons in globular proteins journal, November 1998

Physical Origin of Anharmonic Dynamics in Proteins: New Insights From Resolution-Dependent Neutron Scattering on Homomeric Polypeptides journal, September 2012

The Low-Temperature Dynamic Crossover Phenomenon in Protein Hydration Water: Simulations vs Experiments journal, February 2008

Vibrational relaxation of the H[sub 2]O bending mode in liquid water journal, January 2004

The dynamical crossover in attractive colloidal systems journal, December 2013

The anomalous behavior of the density of water in the range 30 K < T < 373 K journal, November 2007

Water Mediation in Protein Folding and Molecular Recognition journal, June 2006

Dynamical Crossover and Breakdown of the Stokes−Einstein Relation in Confined Water and in Methanol-Diluted Bulk Water journal, February 2010

Spectroscopic Methods for Analysis of Protein Secondary Structure journal, January 2000

Hydration dependence of myoglobin dynamics studied with elastic neutron scattering, differential scanning calorimetry and broadband dielectric spectroscopy journal, January 2014

A consistent picture of protein dynamics. journal, November 1984

Amide-Amide and Amide-Water Hydrogen Bonds: Implications for Protein Folding and Stability journal, March 1994

Solvent-induced distortions and the curvature of α-helices journal, November 1983

Observation of fragile-to-strong dynamic crossover in protein hydration water journal, June 2006

Temperature-dependent X-ray diffraction as a probe of protein structural dynamics journal, August 1979

Spatially inhomogeneous bimodal inherent structure of simulated liquid water journal, January 2011

Little evidence for dynamic divergences in ultraviscous molecular liquids journal, July 2008

Supercooled and Glassy Water journal, June 2003

Multiscale materials modelling at the mesoscale journal, August 2013

Proteins Remain Soft at Lower Temperatures under Pressure journal, April 2009

Neutron scattering evidence of a boson peak in protein hydration water journal, September 1999

Dynamical Transition of Protein-Hydration Water journal, March 2010

Crystalline ribonuclease A loses function below the dynamical transition at 220 K journal, June 1992

Static and pulsed field gradient nuclear magnetic resonance studies of water diffusion in protein matrices journal, October 2011

Hydrogen Bonding in Biological Structures book, January 1991

The Boson Peak of Amyloid Fibrils: Probing the Softness of Protein Aggregates by Inelastic Neutron Scattering journal, March 2014

Viscosity of glass-forming liquids journal, November 2009

The Boson peak in supercooled water journal, June 2013

Effects of hydration water on protein methyl group dynamics in solution
journal, April 2007

Heat capacity effects in protein folding and ligand binding: a re-evaluation of the role of water in biomolecular thermodynamics
journal, April 2005

Temperature dependence of the low‐ and high‐frequency Raman scattering from liquid water
journal, December 1986

Glassy behavior of a protein
journal, April 1989

Nature of the water specific relaxation in hydrated proteins and aqueous mixtures
journal, October 2013

Fast events in protein folding: Relaxation dynamics of secondary and tertiary structure in native apomyoglobin
journal, April 1997

The new insight into dynamic crossover in glass forming liquids from the apparent enthalpy analysis
journal, August 2012

Surface-Mediated Folding and Misfolding of Proteins at Lipid/Water Interfaces
journal, June 2002

Evidence of the existence of the low-density liquid phase in supercooled, confined water
journal, December 2006

The violation of the Stokes-Einstein relation in supercooled water
journal, August 2006

A Topographic View of Supercooled Liquids and Glass Formation
journal, March 1995

Transport properties of glass-forming liquids suggest that dynamic crossover temperature is as important as the glass transition temperature
journal, December 2010

The role of the dynamic crossover temperature and the arrest in glass-forming fluids
journal, September 2011

The structure of proteins: Two hydrogen-bonded helical configurations of the polypeptide chain
journal, April 1951

Supercooled liquids, glass transitions, and the Kauzmann paradox
journal, June 1988

Water-inserted alpha-helical segments implicate reverse turns as folding intermediates
journal, June 1989

Evidence of dynamic crossover phenomena in water and other glass-forming liquids: experiments, MD simulations and theory
journal, November 2009

How Soft Is a Protein? A Protein Dynamics Force Constant Measured by Neutron Scattering
journal, June 2000

Thermal motions and function of bacteriorhodopsin in purple membranes: effects of temperature and hydration studied by neutron scattering.
journal, October 1993

The hydration of amides in helices; a comprehensive picture from molecular dynamics, IR, and NMR
journal, March 2003

Role of Protein-Water Hydrogen Bond Dynamics in the Protein Dynamical Transition
journal, March 2002

Dynamical transition of myoglobin revealed by inelastic neutron scattering
journal, February 1989

Appearance of a fractional Stokes–Einstein relation in water and a structural interpretation of its onset
journal, July 2009

Dynamic Transition in tRNA is Solvent Induced
journal, January 2006

Cooperative charge fluctuations by migrating protons in globular proteins
journal, November 1998

Physical Origin of Anharmonic Dynamics in Proteins: New Insights From Resolution-Dependent Neutron Scattering on Homomeric Polypeptides
journal, September 2012

The Low-Temperature Dynamic Crossover Phenomenon in Protein Hydration Water: Simulations vs Experiments
journal, February 2008

Vibrational relaxation of the H[sub 2]O bending mode in liquid water
journal, January 2004

The dynamical crossover in attractive colloidal systems
journal, December 2013

The anomalous behavior of the density of water in the range 30 K < T < 373 K
journal, November 2007

Water Mediation in Protein Folding and Molecular Recognition
journal, June 2006

Dynamical Crossover and Breakdown of the Stokes−Einstein Relation in Confined Water and in Methanol-Diluted Bulk Water
journal, February 2010

Spectroscopic Methods for Analysis of Protein Secondary Structure
journal, January 2000

Hydration dependence of myoglobin dynamics studied with elastic neutron scattering, differential scanning calorimetry and broadband dielectric spectroscopy
journal, January 2014

A consistent picture of protein dynamics.
journal, November 1984

Amide-Amide and Amide-Water Hydrogen Bonds: Implications for Protein Folding and Stability
journal, March 1994

Solvent-induced distortions and the curvature of α-helices
journal, November 1983

Observation of fragile-to-strong dynamic crossover in protein hydration water
journal, June 2006

Temperature-dependent X-ray diffraction as a probe of protein structural dynamics
journal, August 1979

Spatially inhomogeneous bimodal inherent structure of simulated liquid water
journal, January 2011

Little evidence for dynamic divergences in ultraviscous molecular liquids
journal, July 2008

Supercooled and Glassy Water
journal, June 2003

Multiscale materials modelling at the mesoscale
journal, August 2013

Proteins Remain Soft at Lower Temperatures under Pressure
journal, April 2009

Neutron scattering evidence of a boson peak in protein hydration water
journal, September 1999

Dynamical Transition of Protein-Hydration Water
journal, March 2010

Crystalline ribonuclease A loses function below the dynamical transition at 220 K
journal, June 1992

Static and pulsed field gradient nuclear magnetic resonance studies of water diffusion in protein matrices
journal, October 2011

Hydrogen Bonding in Biological Structures
book, January 1991

The Boson Peak of Amyloid Fibrils: Probing the Softness of Protein Aggregates by Inelastic Neutron Scattering
journal, March 2014

Viscosity of glass-forming liquids
journal, November 2009

The Boson peak in supercooled water
journal, June 2013