Data and scripts associated with “Basin-scale connections between reach-scale sediment respiration and point-scale organic-matter decomposition”

Stegen, James C.; Barnes, Morgan E.; Delgado, Dillman; Forbes, Brieanne; Garayburu-Caruso, Vanessa A.; Goldman, Amy E.; Laan, Maggi; McKever, Sophia A.; Regier, Peter; Renteria, Lupita; Tiegs, Scott D.

doi:10.15485/3008446

Title: Data and scripts associated with “Basin-scale connections between reach-scale sediment respiration and point-scale organic-matter decomposition”

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Abstract

NOTE: The manuscript associated with this data package is currently in review. The data may be revised based on reviewer feedback. Upon manuscript acceptance, this data package will be updated with the final dataset and additional metadata. This data package is associated with “Basin-scale connections between reach-scale sediment respiration and point-scale organic-matter decomposition” submitted to EGU Biogeosciences (preprint: https://doi.org/10.5194/egusphere-2025-6084). It contains cotton strip decomposition rates (Kcd and Kdd) collected across the Yakima River Basin (YRB), Washington, USA. These data were collected to support a broader study examining the drivers of spatial variability in sediment respiration rates in the Yakima River Basin. Associated data used in analysis, metadata, and field protocols can be accessed at https://data.ess-dive.lbl.gov/datasets/doi:10.15485/1923689, https://data.ess-dive.lbl.gov/datasets/doi:10.15485/1969566, and https://data.ess-dive.lbl.gov/datasets/doi:10.15485/1987520. This data package is associated with the repository found at https://github.com/river-corridors-sfa/rcsfa-ST-2B-SSS-cotton-strip. This data package consists of four folders: (1) R-scripts; (2) figures; (3) outputs from the scripts; and (4) published data. The published data folder contains a readme directing the user to download data in order to run the R-scripts. All files are .csv, .pdf, .R, .Rmd, and .txt. For details on how to navigate data packages generated by this project, see https://data.ess-dive.lbl.gov/portals/PNNLRiverCorridorSFA/About. We acknowledge the Yakama Nation as owners and caretakersmore »« less

Authors:

;

Pacific Northwest National Laboratory
Oakland University

Publication Date:: Wed Jan 01 04:00:00 UTC 2025

DOE Contract Number:: AC02-05CH11231

Research Org.:: River Corridor Hydro-biogeochemistry from Molecular to Multi-Basin Scales SFA

Sponsoring Org.:: ESS-DIVE; U.S. DOE > Office of Science > Biological and Environmental Research (BER)

Subject:: 54 ENVIRONMENTAL SCIENCES; Biogeochemistry; Cellulose; Cotton strips; Decay rate; ESS-DIVE CSV File Formatting Guidelines Reporting Format; Field experiment; Freshwater; Hydrobiogeochemical function; Hyporheic zone; Kcd; Kdd; LASSO; Least Absolute Shrinkage and Selection Operator; Organic matter; Organic matter decomposition; River; River corridor; Riverbed sediment; Stream; Stream metabolism; Surface water; Watershed; YRB; Yakima River Basin

OSTI Identifier:: 3008446

DOI:: https://doi.org/10.15485/3008446

Citation Formats


                    Stegen, James C., Barnes, Morgan E., Delgado, Dillman, Forbes, Brieanne, Garayburu-Caruso, Vanessa A., Goldman, Amy E., Laan, Maggi, McKever, Sophia A., Regier, Peter, Renteria, Lupita, and Tiegs, Scott D. Data and scripts associated with “Basin-scale connections between reach-scale sediment respiration and point-scale organic-matter decomposition”.  United States: N. p., 2025. 
        Web.  doi:10.15485/3008446.

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                    Stegen, James C., Barnes, Morgan E., Delgado, Dillman, Forbes, Brieanne, Garayburu-Caruso, Vanessa A., Goldman, Amy E., Laan, Maggi, McKever, Sophia A., Regier, Peter, Renteria, Lupita, & Tiegs, Scott D. Data and scripts associated with “Basin-scale connections between reach-scale sediment respiration and point-scale organic-matter decomposition”.  United States.  doi:https://doi.org/10.15485/3008446

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                    Stegen, James C., Barnes, Morgan E., Delgado, Dillman, Forbes, Brieanne, Garayburu-Caruso, Vanessa A., Goldman, Amy E., Laan, Maggi, McKever, Sophia A., Regier, Peter, Renteria, Lupita, and Tiegs, Scott D. 2025.  
"Data and scripts associated with “Basin-scale connections between reach-scale sediment respiration and point-scale organic-matter decomposition”".  United States.  doi:https://doi.org/10.15485/3008446.  https://www.osti.gov/servlets/purl/3008446. Pub date:Wed Jan 01 04:00:00 UTC 2025

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@article{osti_3008446,

  title        = {Data and scripts associated with “Basin-scale connections between reach-scale sediment respiration and point-scale organic-matter decomposition”},

  author       = {Stegen, James C. and Barnes, Morgan E. and Delgado, Dillman and Forbes, Brieanne and Garayburu-Caruso, Vanessa A. and Goldman, Amy E. and Laan, Maggi and McKever, Sophia A. and Regier, Peter and Renteria, Lupita and Tiegs, Scott D.},

  abstractNote = {NOTE: The manuscript associated with this data package is currently in review. The data may be revised based on reviewer feedback. Upon manuscript acceptance, this data package will be updated with the final dataset and additional metadata. This data package is associated with “Basin-scale connections between reach-scale sediment respiration and point-scale organic-matter decomposition” submitted to EGU Biogeosciences (preprint: https://doi.org/10.5194/egusphere-2025-6084). It contains cotton strip decomposition rates (Kcd and Kdd) collected across the Yakima River Basin (YRB), Washington, USA. These data were collected to support a broader study examining the drivers of spatial variability in sediment respiration rates in the Yakima River Basin. Associated data used in analysis, metadata, and field protocols can be accessed at https://data.ess-dive.lbl.gov/datasets/doi:10.15485/1923689, https://data.ess-dive.lbl.gov/datasets/doi:10.15485/1969566, and https://data.ess-dive.lbl.gov/datasets/doi:10.15485/1987520. This data package is associated with the repository found at https://github.com/river-corridors-sfa/rcsfa-ST-2B-SSS-cotton-strip. This data package consists of four folders: (1) R-scripts; (2) figures; (3) outputs from the scripts; and (4) published data. The published data folder contains a readme directing the user to download data in order to run the R-scripts. All files are .csv, .pdf, .R, .Rmd, and .txt. For details on how to navigate data packages generated by this project, see https://data.ess-dive.lbl.gov/portals/PNNLRiverCorridorSFA/About. We acknowledge the Yakama Nation as owners and caretakers of the lands where we collected these data. We thank the Confederated Tribes and Bands of the Yakama Nation Tribal Council and Yakama Nation Fisheries for working with us to facilitate sample collection and optimization of data usage according to their values and worldview.},

  doi          = {10.15485/3008446},

  journal      = {},

  number       = ,

  volume       = ,

  place        = {United States},

  year         = {Wed Jan 01 04:00:00 UTC 2025},

  month        = {Wed Jan 01 04:00:00 UTC 2025}

}

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DOI: https://doi.org/10.15485/3008446

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