Sorghum epicuticular wax and aerial root mucilage microbiomes

Shade, Ashley; Mullet, John

doi:10.82250/3003553

Title: Sorghum epicuticular wax and aerial root mucilage microbiomes

Dataset
Other Related Research

Abstract

Phyllosphere exudates select for distinct microbiome members in sorghum epicuticular wax and aerial root mucilage. We investigated the microbial communities associated with field-grown energy sorghum epicuticular wax and aerial root mucilage. Sequence data includes 16S rRNA amplicons and ITS amplicons.

Authors:

Shade, Ashley; Mullet, John

Laboratoire Ecologie Microbienne at the University of Lyon, France
GLBRC - Texas A&M University

Publication Date:: Thu Jun 02 00:00:00 EDT 2022

DOE Contract Number:: SC0018409

Research Org.:: Great Lakes Bioenergy Research Center (GLBRC), Madison, WI (United States)

Sponsoring Org.:: USDOE Office of Science (SC), Biological and Environmental Research (BER)

Subject:: Agriculture; Ecology; Microbiome; Plants; Rhizosphere and phyllosphere

OSTI Identifier:: 3003553

DOI:: https://doi.org/10.82250/3003553

Citation Formats


                    Shade, Ashley, and Mullet, John. Sorghum epicuticular wax and aerial root mucilage microbiomes.  United States: N. p., 2022. 
        Web.  doi:10.82250/3003553.

Copy to clipboard


                    Shade, Ashley, & Mullet, John. Sorghum epicuticular wax and aerial root mucilage microbiomes.  United States.  doi:https://doi.org/10.82250/3003553

Copy to clipboard


                    Shade, Ashley, and Mullet, John. 2022.  
"Sorghum epicuticular wax and aerial root mucilage microbiomes".  United States.  doi:https://doi.org/10.82250/3003553.  https://www.osti.gov/servlets/purl/3003553. Pub date:Thu Jun 02 00:00:00 EDT 2022

Copy to clipboard


                    
@article{osti_3003553,

  title        = {Sorghum epicuticular wax and aerial root mucilage microbiomes},

  author       = {Shade, Ashley and Mullet, John},

  abstractNote = {Phyllosphere exudates select for distinct microbiome members in sorghum epicuticular wax and aerial root mucilage. We investigated the microbial communities associated with field-grown energy sorghum epicuticular wax and aerial root mucilage. Sequence data includes 16S rRNA amplicons and ITS amplicons.},

  doi          = {10.82250/3003553},

  journal      = {},

  number       = ,

  volume       = ,

  place        = {United States},

  year         = {Thu Jun 02 00:00:00 EDT 2022},

  month        = {Thu Jun 02 00:00:00 EDT 2022}

}

Copy to clipboard

Dataset:

View Dataset

DOI: https://doi.org/10.82250/3003553

Save / Share:

Export Metadata

Save to My Library

Similar records in DOE Data Explorer and OSTI.GOV collections:

Phyllosphere exudates select for distinct microbiome members in sorghum epicuticular wax and aerial root mucilage

Journal Article Mechan, Marco ; Mullet, John ; Shade, Ashley - Phytobiomes Journal

Phyllosphere exudates create specialized microhabitats that shape microbial community diversity. We explored the microbiome associated with two sorghum phyllosphere exudates, the epicuticular wax and aerial root mucilage. We assessed the microbiome associated with the wax from sorghum plants over two growth stages, and the root mucilage additionally from nitrogen-fertilized and non-fertilized plants. In parallel, we isolated and characterized hundreds of bacteria from wax and mucilage, and integrated data from cultivation-independent and cultivation-dependent approaches to gain insights into exudate diversity and bacterial phenotypes. We found that Sphingomonadaceae and Rhizobiaceae families were the major taxa in the wax regardless of water availabilitymore »« less
Functional and genomic diversity of the sorghum phyllosphere microbiome

Dataset Shade, Ashley

A collection of 47 bacteria isolated from the mucilage of aerial roots of energy sorghum is available at the Great Lakes Bioenergy Research Center, Michigan State University, Michigan, USA. We enriched bacteria with putative plant-beneficial phenotypes and included information on phenotypic diversity, taxonomy, and whole genome sequences.
Defining the functional diversity of the Populus root microbiome

Dataset Pelletier, Dale
Multi-cycle Selection of Sorghum Microbiomes for Biological Nitrogen Fixation

Dataset Pan, Chongle
Genome-sequenced bacterial collection from sorghum aerial root mucilage

Journal Article Mechan-Llontop, Marco E. ; Mullet, John ; Shade, Ashley ; ... - Microbiology Resource Announcements

ABSTRACT A collection of 47 bacteria isolated from the mucilage of aerial roots of energy sorghum is available at the Great Lakes Bioenergy Research Center, Michigan State University, Michigan, USA. We enriched bacteria with putative plant-beneficial phenotypes and included information on phenotypic diversity, taxonomy, and whole genome sequences.

Similar Records