Pyrogenic Organic Matter Laboratory Experiment: Aerobic Respiration and Geochemistry from Variably Inundated Stream Sediments

Gillespie, Xia; Danczak, Robert E.; Forbes, Brieanne; Garayburu-Caruso, Vanessa A.; Goldman, Amy E.; Myers-Pigg, Allison N.; Radakovich, Alyssa; Renteria, Lupita; Ward, Nicholas; Stegen, James C.

doi:10.15485/3001969

Title: Pyrogenic Organic Matter Laboratory Experiment: Aerobic Respiration and Geochemistry from Variably Inundated Stream Sediments

Dataset
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Abstract

This dataset supports a broader study examining the effects of variable inundation and pyrogenic organic matter on ecosystem respiration. The dataset provides data generated from a laboratory batch experiment investigating the interaction between variable inundation conditions (wet and dry sediment) and pyrogenic organic matter (burned and unburned treatments). The contents include time series dissolved oxygen, sediment geochemistry data, and field metadata (including qualitative information on instream and river corridor characteristics). Additional data types, including respiration, will be added as they become available. For details on how to navigate data packages generated by this project, see https://data.ess-dive.lbl.gov/portals/PNNLRiverCorridorSFA/About. In addition to a readme, this data package also includes a file-level metadata (FLMD) file that describes each file and a data dictionary (DD) that describes all column/row headers and variable definitions.This dataset is comprised of (1) file-level metadata; (2) data dictionary; (3) field metadata; (4) international generic sample number (IGSN) mapping file; (5) readme; (6) field protocol; (7) sample name metadata; (8) an environmental context picture for the dry and inundated sampling locations; and (9) a subfolder with sample data from the sediment incubation experiment. The sample data subfolder contains (1) dissolved organic carbon (DOC, measured as non-purgeable organic carbon, NPOC); (2) totalmore »« less

Authors:

Gillespie, Xia;

;

Pacific Northwest National Laboratory
The University of Nevada, Reno

Publication Date:: Wed Jan 01 04:00:00 UTC 2025

DOE Contract Number:: AC02-05CH11231

Research Org.:: River Corridor Hydro-biogeochemistry from Molecular to Multi-Basin Scales SFA

Sponsoring Org.:: U.S. DOE > Office of Science > Biological and Environmental Research (BER)

Subject:: 54 ENVIRONMENTAL SCIENCES; Batch experiment; Biogeochemistry; Carbon dioxide; Catchment; Char; DOC; Dissolved organic carbon; Dissolved oxygen; Disturbance; ESS-DIVE CSV File Formatting Guidelines Reporting Format; ESS-DIVE File Level Metadata Reporting Format; ESS-DIVE Location Metadata Reporting Format; ESS-DIVE Sample ID and Metadata Reporting Format; ESS-DIVE Water-Soil-Sediment Chemistry Reporting Format; Freshwater; Gravimetric moisture; Hydraulic exchange; Hydrobiogeochemical function; Hydrology; Hyporheic zone; NPOC; Non-purgeable organic carbon; Pyrogenic organic matter; River; River corridor; Stream; Surface water; TN; Total dissolved nitrogen; VIE; Variably Inundated Ecosystem; Watershed; Wildfire

OSTI Identifier:: 3001969

DOI:: https://doi.org/10.15485/3001969

Citation Formats


                    Gillespie, Xia, Danczak, Robert E., Forbes, Brieanne, Garayburu-Caruso, Vanessa A., Goldman, Amy E., Myers-Pigg, Allison N., Radakovich, Alyssa, Renteria, Lupita, Ward, Nicholas, and Stegen, James C. Pyrogenic Organic Matter Laboratory Experiment: Aerobic Respiration and Geochemistry from Variably Inundated Stream Sediments.  United States: N. p., 2025. 
        Web.  doi:10.15485/3001969.

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                    Gillespie, Xia, Danczak, Robert E., Forbes, Brieanne, Garayburu-Caruso, Vanessa A., Goldman, Amy E., Myers-Pigg, Allison N., Radakovich, Alyssa, Renteria, Lupita, Ward, Nicholas, & Stegen, James C. Pyrogenic Organic Matter Laboratory Experiment: Aerobic Respiration and Geochemistry from Variably Inundated Stream Sediments.  United States.  doi:https://doi.org/10.15485/3001969

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                    Gillespie, Xia, Danczak, Robert E., Forbes, Brieanne, Garayburu-Caruso, Vanessa A., Goldman, Amy E., Myers-Pigg, Allison N., Radakovich, Alyssa, Renteria, Lupita, Ward, Nicholas, and Stegen, James C. 2025.  
"Pyrogenic Organic Matter Laboratory Experiment: Aerobic Respiration and Geochemistry from Variably Inundated Stream Sediments".  United States.  doi:https://doi.org/10.15485/3001969.  https://www.osti.gov/servlets/purl/3001969. Pub date:Wed Jan 01 04:00:00 UTC 2025

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@article{osti_3001969,

  title        = {Pyrogenic Organic Matter Laboratory Experiment: Aerobic Respiration and Geochemistry from Variably Inundated Stream Sediments},

  author       = {Gillespie, Xia and Danczak, Robert E. and Forbes, Brieanne and Garayburu-Caruso, Vanessa A. and Goldman, Amy E. and Myers-Pigg, Allison N. and Radakovich, Alyssa and Renteria, Lupita and Ward, Nicholas and Stegen, James C.},

  abstractNote = {This dataset supports a broader study examining the effects of variable inundation and pyrogenic organic matter on ecosystem respiration. The dataset provides data generated from a laboratory batch experiment investigating the interaction between variable inundation conditions (wet and dry sediment) and pyrogenic organic matter (burned and unburned treatments). The contents include time series dissolved oxygen, sediment geochemistry data, and field metadata (including qualitative information on instream and river corridor characteristics). Additional data types, including respiration, will be added as they become available. For details on how to navigate data packages generated by this project, see https://data.ess-dive.lbl.gov/portals/PNNLRiverCorridorSFA/About. In addition to a readme, this data package also includes a file-level metadata (FLMD) file that describes each file and a data dictionary (DD) that describes all column/row headers and variable definitions.This dataset is comprised of (1) file-level metadata; (2) data dictionary; (3) field metadata; (4) international generic sample number (IGSN) mapping file; (5) readme; (6) field protocol; (7) sample name metadata; (8) an environmental context picture for the dry and inundated sampling locations; and (9) a subfolder with sample data from the sediment incubation experiment. The sample data subfolder contains (1) dissolved organic carbon (DOC, measured as non-purgeable organic carbon, NPOC); (2) total nitrogen (TN); (3) gravimetric moisture; (4) carbon dioxide; (5) field wet sediment mass, dry sediment mass, water mass, and field wet sediment volume in incubation and sediment NPOC/TN vials; (6) methods codes; and (7) raw time series dissolved oxygen and temperature. All files are .csv or .pdf.},

  doi          = {10.15485/3001969},

  journal      = {},

  number       = ,

  volume       = ,

  place        = {United States},

  year         = {Wed Jan 01 04:00:00 UTC 2025},

  month        = {Wed Jan 01 04:00:00 UTC 2025}

}

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DOI: https://doi.org/10.15485/3001969

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