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Title: Fermented Foods Microbial Genomes Database

Abstract

This database contains ~4,300 microbial genomes assembled from diverse fermented foods. These genomes were obtained from a larger set of 13,850 microbial genomes by clustering them at 99% average nucleotide identity (ANI) to create a "species"-representative database.

Authors:
ORCiD logo
  1. Microcosm Foods
Publication Date:
DOE Contract Number:  
AC02-05CH11231; AC02-06CH11357; AC02-98CH10886; AC05-00OR22725
Research Org.:
U.S. Department of Energy Systems Biology Knowledgebase (KBASE); Microcosm Foods
Sponsoring Org.:
USDOE Office of Science (SC), Biological and Environmental Research (BER)
Subject:
59 BASIC BIOLOGICAL SCIENCES; fermented foods; genomes; microbes
OSTI Identifier:
2569606
DOI:
https://doi.org/10.25982/218406.47/2569606

Citation Formats

McDaniel, Elizabeth A. Fermented Foods Microbial Genomes Database. United States: N. p., 2025. Web. doi:10.25982/218406.47/2569606.
McDaniel, Elizabeth A. Fermented Foods Microbial Genomes Database. United States. doi:https://doi.org/10.25982/218406.47/2569606
McDaniel, Elizabeth A. 2025. "Fermented Foods Microbial Genomes Database". United States. doi:https://doi.org/10.25982/218406.47/2569606. https://www.osti.gov/servlets/purl/2569606. Pub date:Tue Jun 17 00:00:00 EDT 2025
@article{osti_2569606,
title = {Fermented Foods Microbial Genomes Database},
author = {McDaniel, Elizabeth A.},
abstractNote = {This database contains ~4,300 microbial genomes assembled from diverse fermented foods. These genomes were obtained from a larger set of 13,850 microbial genomes by clustering them at 99% average nucleotide identity (ANI) to create a "species"-representative database.},
doi = {10.25982/218406.47/2569606},
journal = {},
number = ,
volume = ,
place = {United States},
year = {Tue Jun 17 00:00:00 EDT 2025},
month = {Tue Jun 17 00:00:00 EDT 2025}
}