Detecting bacteria and Determining Their Susceptibility to Antibiotics by Stochastic Confinement in Nanoliter Droplets using Plug-Based Microfluidics

Journal Article · Tue Jan 01 04:00:00 EST 2008 · Lab on a Chip

DOI:https://doi.org/10.1039/b804911d· OSTI ID:980139

Boedicker, J; Li, L; Kline, T; Ismagilov, R

This article describes plug-based microfluidic technology that enables rapid detection and drug susceptibility screening of bacteria in samples, including complex biological matrices, without pre-incubation. Unlike conventional bacterial culture and detection methods, which rely on incubation of a sample to increase the concentration of bacteria to detectable levels, this method confines individual bacteria into droplets nanoliters in volume. When single cells are confined into plugs of small volume such that the loading is less than one bacterium per plug, the detection time is proportional to plug volume. Confinement increases cell density and allows released molecules to accumulate around the cell, eliminating the pre-incubation step and reducing the time required to detect the bacteria. We refer to this approach as stochastic confinement. Using the microfluidic hybrid method, this technology was used to determine the antibiogram - or chart of antibiotic sensitivity - of methicillin-resistant Staphylococcus aureus (MRSA) to many antibiotics in a single experiment and to measure the minimal inhibitory concentration (MIC) of the drug cefoxitin (CFX) against this strain. In addition, this technology was used to distinguish between sensitive and resistant strains of S. aureus in samples of human blood plasma. High-throughput microfluidic techniques combined with single-cell measurements also enable multiple tests to be performed simultaneously on a single sample containing bacteria. This technology may provide a method of rapid and effective patient-specific treatment of bacterial infections and could be extended to a variety of applications that require multiple functional tests of bacterial samples on reduced timescales.

• Research Organization: Brookhaven National Laboratory (BNL) National Synchrotron Light Source
• Sponsoring Organization: Doe - Office Of Science
• DOE Contract Number: AC02-98CH10886
• OSTI ID: 980139
• Report Number(s): BNL--93057-2010-JA
• Journal Information: Lab on a Chip, Journal Name: Lab on a Chip Vol. 8
• Country of Publication: United States
• Language: English

Related Subjects

59 BASIC BIOLOGICAL SCIENCES
60 APPLIED LIFE SCIENCES
99 GENERAL AND MISCELLANEOUS
ANTIBIOTICS
BACTERIA
BLOOD PLASMA
CLOSURES
CONFINEMENT
DENSITY
DETECTION
DIAGRAMS
DROPLETS
DRUGS
FUNCTIONALS
HUMAN POPULATIONS
HYBRIDIZATION
INCUBATION
LEVELS
LOADING
MATRICES
MOLECULES
SCREENING
SENSITIVITY
STAPHYLOCOCCUS
STRAINS
USES
VOLUME
national synchrotron light source