Skip to main content
U.S. Department of Energy
Office of Scientific and Technical Information

Visualizing nucleation, condensation and propagation of β-tubulin folding in chaperonin TRiC

Journal Article · · BioRxiv
AbstractThe folding nucleus (FN) initiates protein folding and enables an efficient folding pathway. Here we directly visualize the tubulin FN consisting of a nonnative, partially assembled Rossmann fold, in the closed chamber of human chaperonin TRiC. Chaperonin TRiC interacts with non-natively folded secondary structural elements, stabilizing the nucleus for transition into its first native domain. Through progressive folding, the unfolded sequence goes through drastic spatial arrangement in the TRiC chamber to sample the conformational space, mediated by the highly dynamic CCT tails. The observed presence of individual nonnative secondary structures first in the nonnative FN and then around the incrementally folded native domains supports the hypothesis that tubulin folding in TRiC is a hierarchical process of nucleation, condensation and propagation in cooperation with TRiC subunits.
Research Organization:
SLAC National Accelerator Laboratory (SLAC)
Sponsoring Organization:
USDOE Office of Science (SC)
Grant/Contract Number:
AC02-76SF00515
OSTI ID:
2575658
Journal Information:
BioRxiv, Journal Name: BioRxiv
Publisher:
Cold Spring Harbor LaboratoryCopyright Statement
Country of Publication:
United States
Language:
English

References (26)

Theory of cooperative transitions in protein molecules. I. Why denaturation of globular protein is a first-order phase transition journal October 1989
Theory of cooperative transitions in protein molecules. II. Phase diagram for a protein molecule in solution journal October 1989
The Structure of the Transition State for Folding of Chymotrypsin Inhibitor 2 Analysed by Protein Engineering Methods: Evidence for a Nucleation-condensation Mechanism for Protein Folding journal November 1995
Nucleation mechanisms in protein folding journal February 1997
Protein folding funnels: the nature of the transition state ensemble journal December 1996
Structural visualization of the tubulin folding pathway directed by human chaperonin TRiC/CCT journal December 2022
Is Burst Hydrophobic Collapse Necessary for Protein Folding? journal March 1995
Theory for the folding and stability of globular proteins journal March 1985
Protein-folding dynamics journal April 1976
TCP1 complex is a molecular chaperone in tubulin biogenesis journal July 1992
Initial hydrophobic collapse in the folding of barstar journal October 1995
Localizing internal friction along the reaction coordinate of protein folding by combining ensemble and single-molecule fluorescence spectroscopy journal November 2012
Defining the TRiC/CCT interactome links chaperonin function to stabilization of newly made proteins with complex topologies journal November 2008
CryoDRGN: reconstruction of heterogeneous cryo-EM structures using neural networks journal February 2021
Are there pathways for protein folding? journal January 1968
Protein folding from a highly disordered denatured state: The folding pathway of chymotrypsin inhibitor 2 at atomic resolution journal March 2001
A folding nucleus and minimal ATP binding domain of Hsp70 identified by single-molecule force spectroscopy journal April 2018
Nucleation, Rapid Folding, and Globular Intrachain Regions in Proteins journal March 1973
Levinthal's paradox. journal January 1992
Cooperativity in protein-folding kinetics. journal March 1993
Structure of the transition state for the folding/unfolding of the barley chymotrypsin inhibitor 2 and its implications for mechanisms of protein folding. journal October 1994
Toward an outline of the topography of a realistic protein-folding funnel. journal April 1995
A novel protein complex promoting formation of functional alpha - and gamma -tubulin journal February 1998
Structural basis of plp2-mediated cytoskeletal protein folding by TRiC/CCT journal March 2023
Principles that Govern the Folding of Protein Chains journal July 1973
THEORY OF PROTEIN FOLDING: The Energy Landscape Perspective journal October 1997

Similar Records

The Mechanism and Function of Group II Chaperonins
Journal Article · Wed Apr 29 20:00:00 EDT 2015 · Journal of Molecular Biology · OSTI ID:1440550

Structure of the gene coding for the mouse TRiC-P5 subunit of the cytosolic chaperonin TRiC
Journal Article · Sun Dec 31 23:00:00 EST 1995 · Genomics · OSTI ID:478840

Structure of the human TRiC/CCT Subunit 5 associated with hereditary sensory neuropathy
Journal Article · Thu Jun 15 20:00:00 EDT 2017 · Scientific Reports · OSTI ID:1379932

Related Subjects